Basic Information

Gene Symbol
Ubp1
Assembly
GCA_943734865.1
Location
CALSEK010000115.1:976033-979893[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3 1.6e+04 -12.0 12.0 123 123 143 143 101 207 0.54
2 2 3.4e-64 1.8e-60 203.8 0.0 24 220 266 474 248 477 0.93

Sequence Information

Coding Sequence
ATGTGTGAAACGTACGGGTTTGGTGGTGATACGATGGACAAGGATTACGTCCGGAAACGGCTAAAGTGCTTTAACGGCGCCAGCAACGGGAACGAAGTCGGCAATGGTAATAATAATCTCGGGACAAACACACCCCCCTGTAACAGTACAGCCAACAACAATGAACTAGGAAGCTTGCGATGGGCCGATGATCTTGACTTGGACCTCAGTAACGAGCTGTCCAGTAATGGATACATTAGTGATTCATTGTTGACCTTCCCGGTCTTCAAACAAGAACTACCATCACCTCCTCAGAAGcctcctcaacagcagcaacaacactcacagtctgctcaccaacaacagcagcaacagcaacaacaacaacaacatcaactccatcaacagcagcaacaagtcttgcatcagcaagcagccgcaagctctcaggatcattcacaacaatcccaacaccaacacgcacctgccagtttacaacaatccttagctggtggagttaatcctgccagcagtggaaatgctgccaacaatacccatcaacagcaacaacagcaggttgtccaatatcaccaacaacaacagcagcagcagcagcaacagcagggacacagttctatgaatggtggtgGGCAGAGTTTGATGAGCGGTACCGATCATCACGCAACCGGAATCGGTGCCGGTTTAAGCAATCTGCAAAGCTTTCTACAAAGCAATCGTTTGGAAAATGATCCTAGTGCAGGCGTTTTACAGATGCAACAGGATGGCACGTTACCAGTCGCACGTGGTGACAAAACACACGACGATCACAATCGGTTCCAGTACGTGCTAGCAGCTGCGACCTCGATAGCGACGAAGAACAACGAAGAATCTCTCACCTACCTTAACCAGGGTCAGAGCTACGAGATCAAGCTGAAGAAGCTTGGCGATCTGTCCCCGTTCCGGGGTAAGATTCTGAAAAGTATTATCAAGATATGCTTCCACGAGCGTCGCCTGCAGTACATGGAGCGGGAACAGATGCAGCTGTGGCAAGCTTCCCGACCCGGTGAGAGGATATTGGATGTTGACATACCACTATCGTACGGATTGATGCAGGTGCAGCCTACCAGCAGCAACCTGCTTAACACGATCGAGGTGTTTTGGGACCCAATGAAGGAGGTCGGCGTGTACGTAAAGGTGAACTGCATTTCCACGGAATTCACACCCAAAAAGCATGGCGGCGAGAAGGGTGTCCCATTCCGGATTCAGGTCGAAACGTACATCGACACGAACGGGCTGCATAATGGGACCGGTAATGGTGTGGCGGGTATGGACGATAAAGACGGTATTAGACCACTCCATGCGGCGGCTTGCCAAATAAAGGTTTTCAAATTGAAAGGAGCCGATCGAAAACACAAACAGGATCGAGAGAAAATACTCAAGCGTCCGGTTGCAGAGCAGGAGAAATACCAGCGCAGCTGTGACTGTACGATACTGACGGATATTACGACCGATTCAGTCATTACACCGCTCGGTGGCAGCTTTAGTCCCGATCACATTAAGCGTAACGTGTCACCATTGTTGGGCGGTCCAACCTCACCGGGGCAGCTGAACAAGTTCGAAAACATGATGTCAAGTGTGCTGTGCAACGGCGGAAACGTTGTTAGTCCCGGGGCAAATCCTACCACAACGTCGACAACTACGGCGGCGGCCGCCATGGTTGTTGCGGCGGCGGCTGCTGCCGCTGCCGCCGGCGTACAGAACAATCCGATCGGAATCAGTAACGTTAGCTCGACGAACGGACTGTGTAAAGCGTCGCCGCTCGGTGTGGATCAACCGATGGTGCTTTCGCCCCAGCAGCCGAGCGAACTGGACGATTACGTGCCATCGATTACGAAGGAAACAAGCCCGGGAACGTTGGCCCAGTGGTTGGCCGTGCATCGGTTGTCTGCGTACGCGAAAACTTTCGCCCAGTTTTCCGGTTCGGATCTGTTAAGAATGTCCAAAGATGATCTTTGTAAAATTTGTGGCTTAGCAGATGGCATTCGAATGTTTAACATTCTCCATTCGAAAGCCATAACGCCACGCTTAACCATCTATGTTAGCTTCCAAACCAACATCTATCACGCGATCTATCTGCACTCGAACACCATCCCGGAGCTGGTGCAAAATCTGTCCAAAATTCCCGGCTTTCTGGAAGCTATTAATGCGCTCAACACACCCAACACTACCACATCCGATGCCGGTCTCTGGAGTGGTACGTTCGGTGGGCCGCGTTCACTTAACCCCGGTCCATCTAATGGCAGCAGTAACGGAGCTCACGGTAAACTTCCCACCAACGGTGGAACGAACTCTGCCGTTCAGCTATCCGTTCCATCGCCTTCGTCACCTATCTCGTCCTCGTCCGGCATTGCGAAGTTGCAGCTACTGCTTAAAGGCCCGAACGGGATACAGGTGCTGCTGACGGAGGATGTGCTGAACAACATCAAGGACGAAACACTGTTTCAGCTGGAGCTGAAACCGAACGGCAACATACTAATGAAAGCGGTCCACAGTGTGACCGGGACGGCGGGGGGTGACTGTTCGATCGATGAGGATGCGAACTGA
Protein Sequence
MCETYGFGGDTMDKDYVRKRLKCFNGASNGNEVGNGNNNLGTNTPPCNSTANNNELGSLRWADDLDLDLSNELSSNGYISDSLLTFPVFKQELPSPPQKPPQQQQQHSQSAHQQQQQQQQQQQHQLHQQQQQVLHQQAAASSQDHSQQSQHQHAPASLQQSLAGGVNPASSGNAANNTHQQQQQQVVQYHQQQQQQQQQQQGHSSMNGGGQSLMSGTDHHATGIGAGLSNLQSFLQSNRLENDPSAGVLQMQQDGTLPVARGDKTHDDHNRFQYVLAAATSIATKNNEESLTYLNQGQSYEIKLKKLGDLSPFRGKILKSIIKICFHERRLQYMEREQMQLWQASRPGERILDVDIPLSYGLMQVQPTSSNLLNTIEVFWDPMKEVGVYVKVNCISTEFTPKKHGGEKGVPFRIQVETYIDTNGLHNGTGNGVAGMDDKDGIRPLHAAACQIKVFKLKGADRKHKQDREKILKRPVAEQEKYQRSCDCTILTDITTDSVITPLGGSFSPDHIKRNVSPLLGGPTSPGQLNKFENMMSSVLCNGGNVVSPGANPTTTSTTTAAAAMVVAAAAAAAAAGVQNNPIGISNVSSTNGLCKASPLGVDQPMVLSPQQPSELDDYVPSITKETSPGTLAQWLAVHRLSAYAKTFAQFSGSDLLRMSKDDLCKICGLADGIRMFNILHSKAITPRLTIYVSFQTNIYHAIYLHSNTIPELVQNLSKIPGFLEAINALNTPNTTTSDAGLWSGTFGGPRSLNPGPSNGSSNGAHGKLPTNGGTNSAVQLSVPSPSSPISSSSGIAKLQLLLKGPNGIQVLLTEDVLNNIKDETLFQLELKPNGNILMKAVHSVTGTAGGDCSIDEDAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00108147;
90% Identity
-
80% Identity
-