Akol005578.1
Basic Information
- Insect
- Anopheles koliensis
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_000956275.1
- Location
- JXXB01029739.1:1-1823[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.5 1.3e+04 -3.7 0.9 15 18 166 169 165 169 0.76 2 13 0.52 4.6e+03 -2.2 1.4 14 19 217 222 217 222 0.86 3 13 0.041 3.6e+02 1.3 0.3 4 10 253 259 252 261 0.94 4 13 1.5e-08 0.00013 21.9 17.9 1 19 267 284 267 284 0.99 5 13 0.00055 4.8 7.3 15.9 1 19 320 339 320 339 0.96 6 13 0.42 3.8e+03 -2.0 1.9 6 10 364 368 363 368 0.90 7 13 4e-08 0.00036 20.5 10.7 1 19 374 392 374 392 0.93 8 13 0.63 5.5e+03 -2.5 0.4 6 10 419 423 418 426 0.48 9 13 6.8e-08 0.00061 19.7 16.3 1 18 429 446 429 447 0.97 10 13 1.1 9.8e+03 -3.3 0.3 9 11 464 466 464 467 0.78 11 13 1.4 1.3e+04 -3.7 0.4 11 15 471 475 470 476 0.63 12 13 2e-06 0.018 15.1 15.2 1 18 481 498 481 499 0.97 13 13 5.3e-10 4.7e-06 26.5 13.6 1 18 508 525 508 526 0.97
Sequence Information
- Coding Sequence
- ATGGCTAACCGTAATCGTGGCGGAAAAGTTGCTCCTAAAGAGCAGAACCCTTGGAAGTTGCCTGCACAACCGAAACCCGAAACGTTCGTTGGAAAACCGCGAAAAGCATCCAACAAATCCGCTGCCGGCGATTTACCAACGGCGGAACAGAGTTTAGGCGGTTCGAAAATCCCTCTGCCTACCGTGTCATCTAGTATGCTGAAAAAATCACAGGAAAAGTTCGATCAAGTCCAGCGGCAGCATGTCGAAAAGGCACGCAAATATGCCACCGAGTACGTCTCGAGCGAAGATGATGACCAGGACGGTGAGGCGAACGGAGAGGAAGCGAGCGACGAAACTAATCGCACAATCCTAGGGGACGTGTTGAAAAACTACAACGGCATCGATGCGGACGTGGGTAAAACGCAGGAGTACCTGCAGCACCTTCTCGAATCACGCAATGCCGTCTGCTTGATCTGCATCGAGACGGTTAAACGTGCGGATAGGATCTGGTCCTGCGGCTCGTGCTTCACTTTCTTCCATCTGATGTGCATCCAACGCTGGGCTAATGATAGCATGTCCATGAAGCGTATGCATCACGAGCAGCAGGAAGGCTACTACAACAATCGGGGAGAGTACATCCCGAAGCCGGCGCTGAACGTGCACTGGGACTGTCCGAAGTGTCGGCGAGAGTACGAACCGGCGGAGGTACCGCGTCACTACGAGTGTTTCTGCGGCAAAGAGCGTGATCCAAACGCCCATCCGTGGCTGATTCCACATTCGTGTGGTGAACCGTGCGGGAAGCAGCTTAAACCGGCCTGTGGACACACGTGCCGGTTGCTCTGCCATCCAGGGCCGTGTCCACCGTGTCCGCAGACCATTAACGTGTCTTGTCGGTGCGGCAGCTCGCCTGTGAAAACGATTCGATGCGCGCAGCAAGCGTGGAGCTGTGTGAAGAAGTGCAAACGTAAGCTGGCGTGTGGTATACACGAGTGTGGAGCCCAGTGCCACGAGCCGAACCAGTGTCCACCATGTCAGAACCGTAGCAAACAACCGTGTCTCTGCGGGACGAAGACCAAAGAAGTAAACTGTCACGAGTCGCACTGGCAATGCGAGAAAGTGTGCAACGAACCGTTCGCCTGTAACGTGCATCGTTGCGAGCGCATCTGCCACGAGGGAGCTTGTGGTGCCTGCCCGCTCGGATTGCCCCGATCGTGTCCGTGCGGTAAGTCGGAAACGCGTACCGCCGTCTCCTGCGCGGAACAGATCGGTACATGTGGCGATACGTGCGAGAAGCTGCTGGCATGCGGTGAACATACGTGCCCGGAGCGATGCCATCAGGGTCCGTGCGGTAACTGTTTGGAGCTGGTGCCGAAGGTGTGTCGCTGTGGTTCGACCAAGAAACCGATCGTTTGCCATCGTGAGGCACTATGCGAGGGAAAGTGCAAGCGGATGCGTACCTGCGGCAAGCACCAGTGCAATCGGAAGTGTTGCGATGGCCAGTGTCAGCTGTGTGATCGTGTTTGTGGAAAGACGCTACCCTGTGGGAAACACAAATGCAGTTCCCTCTGTCACCAAGGGCCTTGCTATCCGTGCAATTTGAAATCCACGGTCAAGTGTCG
- Protein Sequence
- MANRNRGGKVAPKEQNPWKLPAQPKPETFVGKPRKASNKSAAGDLPTAEQSLGGSKIPLPTVSSSMLKKSQEKFDQVQRQHVEKARKYATEYVSSEDDDQDGEANGEEASDETNRTILGDVLKNYNGIDADVGKTQEYLQHLLESRNAVCLICIETVKRADRIWSCGSCFTFFHLMCIQRWANDSMSMKRMHHEQQEGYYNNRGEYIPKPALNVHWDCPKCRREYEPAEVPRHYECFCGKERDPNAHPWLIPHSCGEPCGKQLKPACGHTCRLLCHPGPCPPCPQTINVSCRCGSSPVKTIRCAQQAWSCVKKCKRKLACGIHECGAQCHEPNQCPPCQNRSKQPCLCGTKTKEVNCHESHWQCEKVCNEPFACNVHRCERICHEGACGACPLGLPRSCPCGKSETRTAVSCAEQIGTCGDTCEKLLACGEHTCPERCHQGPCGNCLELVPKVCRCGSTKKPIVCHREALCEGKCKRMRTCGKHQCNRKCCDGQCQLCDRVCGKTLPCGKHKCSSLCHQGPCYPCNLKSTVKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -