Basic Information

Gene Symbol
ZFY
Assembly
GCF_000005575.2
Location
NT:14427459-14439915[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.2e-06 6e-05 22.8 2.0 1 23 10 32 10 32 0.99
2 15 3.5e-05 0.0018 18.1 0.4 1 23 38 60 38 60 0.99
3 15 0.00026 0.013 15.4 0.9 1 23 66 88 66 88 0.98
4 15 0.29 15 5.8 0.0 1 23 164 188 164 188 0.93
5 15 1.1 55 4.0 0.4 12 23 193 204 192 204 0.85
6 15 8.2e-07 4.2e-05 23.3 1.8 1 23 210 232 210 232 0.99
7 15 0.19 9.5 6.4 8.5 1 20 289 308 289 311 0.94
8 15 5e-05 0.0025 17.7 2.2 1 23 317 339 317 339 0.97
9 15 1.8e-06 9.1e-05 22.2 2.6 1 23 345 367 345 367 0.95
10 15 8.5e-07 4.3e-05 23.2 2.9 1 23 407 429 407 429 0.99
11 15 0.0011 0.057 13.4 1.0 1 23 435 457 435 457 0.98
12 15 7.4 3.8e+02 1.4 0.2 2 23 669 692 668 692 0.78
13 15 0.0073 0.37 10.8 3.2 2 20 698 716 697 719 0.94
14 15 2e-05 0.001 18.9 1.0 1 23 725 747 725 747 0.97
15 15 1.1e-06 5.4e-05 22.9 1.3 1 23 753 775 753 775 0.95

Sequence Information

Coding Sequence
ATGCTTACGCACACCGGTGAAAAGCCGTTCAAATGCACGTACTGTGAGCGCAGCTTCGCGCAAAGCAACGACATGGTGAAGCACATGAAAACGCACGTGGGCGAAAACCCGTACCAGTGCGATCGGTGTGAAGCATCCTTCGCGCAAAGCAACGTGCTCGTGAAGCACATGAAAACGCACGTCGGCGACCATCCGTACCAGTGCGATCGGTGTGACGCGTCCTTCCGGCTGCTGAAGGACCTGCGCAACCACTATCAGGAGCACTACGTGGAGAGTGAGAACGGTATCGGGCCGTCCCCGAGCAAGATAAATGATGGCAGGCGTTCAACGACGCGTGAAAAAGGCAACGCCACTCTAGACAACAGCACCACCTCCCGATCGGATGACGATACCGAACCAAATTGCAAGAAAAGTATCGAAAAATTGAACGATACGACAGCAGAAGAAGCGCTCCCGCACGAGGAGAAGctcgaaacgaaaaaagatcTCTACAAATGTGTGCTGTGCGATGTTCCGGCGTTCACCGGGCCGGACGCACTGACCGACCATCTGAAGGCGGCGCATCCGGACCAGATACGGGCCTACATGGTAAAGCGGCACATGCGGACCCACACGGGCGAAAAGCCCTACAAATGTACGTACTGTGAGCGCAGCTTCGCACAGAGCAACGACATGGTGAAGCACATGAAAACGCACAAAGGACCCGGCAGGAAGCCAAAGCAACCAAAGGAGGAAAGTGACAACGATACGGAGGAACCGAAAACGAAGGTCGACCTGTACCGCTGTCTGCTGTGCGATGCACCGACCTACACCTCGCCGAAGGAGCACACCGACCATCTGCTGAAGGAACATCCGGACCAGATACATTGCTGCAAGCAGTGCCCGAAGGTGTTCATGACCAAGGCGGCCTTCGAGCATCACCAGTACTGTCACGCGACGGGGCGTTCGTTCTTCTGCATGTTTTGCGACAAAGGCTTTCAGACGGAGCAGCTGCTGAAGAACCACATGCGGACGCATACGCACGGGACCGGGTTcctgtgctcgcactgtgggCAGGAGTTTAGCAATCGGAGCAATCTGCGCCAACACTTGATACGGCACACGGGTGAGAAGCCGTGGCAGTGTAATCTGTGCCCGAGTCGTTTCAGTATGAAGAGTAAATTCACCTCGAGCCACCACGTGAAACGGCACATGCTTACGCACACAGGCGAGAAACCGTTCAAGTGTACGTACTGTGAGCGCAGCTTCACGCAAAGCAACGACATGGTGAAGCACATGAAAACGCACGTGGGCGAAAATCCATACCAGTGCGATCGGTGTGAAGCATCGTTCCGGCTGCTCACCGATCTACGCAATCACTACAAGGACCACTATCTGCCGGGCGGCAAGGATGCACTGTCCGGTGAGGAGGACAAGGACCAAACCATGACGATACAGCTAACGTTCTGTCGTATCTGTGCCGTCCTCAGCACGGAGGAGCATTGCATCTACGAAGTGGCGTACAGTGCCGGCACACTCAGCATGCACGCGATGATGGAAAAGCTAGTTCCCTCGGTGTTCAACGCGGAGCAGGTAAAGGTGGACGAGTTTATGTCCTTTCCCACGAAAGTGTGCGGCAGTTGCAAAGCCAAAGTGCTCGAGGCGTACGGGCTGTACGAGCAGTGCGTGAGGAGTGGCGATCTGCTGCGCGACTGTTTAGCGCGTAAGAAAAACGCAACGTTCATCGTGAACATAACcggtgctggcggtggtggtggtggtggtggtggtggggtggATAGTTCCGAGGGCAAAATCATTGTCCCGCTGGCGTACGAAACGGAGGAAGTGTCGGTAGGTGGCAAACCTCACACTACAACGGTGGTTGAGATAACGACGGAAGAAATCGGCCCACACTGTAAGGTGGAAAGTGAAGGCGAAAGTGAGATGGTGGAAAAGCACGACGACACTGCCGACGTGCTGTTAGAAACAACGGAAGAACCAAAACTGAATCCCGTTCAATTGCGCTGCCTACTGTGCAATCGACCAGCGTTTGCCGCACCGGCGGAACTTACGCAGCACCTGCACAGCGAGCATGCGGATCAAATATTGCGCTGCACCCTCTGCCCGAAAGTGTTCATGACCAAGGCGGCCTTCGAGCATCACCAGTACTGTCACGCGACGGGGCGATCGTTCTTTTGCGCGCTGTGCGATAAAGGCTTTCAGTCGGAGCAGCTGCTGAAGAACCACATGCGGACGCACACGCACGGGACCGGGTTCCTGTGCTCGCAGTGTGGCAAAGAGTTTAGCGATCGAAGCAACCTACGCCAGCACGAGCAGCGCCACACCGGCGAGAAACCCTGGGCATGCAGCATGTGT
Protein Sequence
MLTHTGEKPFKCTYCERSFAQSNDMVKHMKTHVGENPYQCDRCEASFAQSNVLVKHMKTHVGDHPYQCDRCDASFRLLKDLRNHYQEHYVESENGIGPSPSKINDGRRSTTREKGNATLDNSTTSRSDDDTEPNCKKSIEKLNDTTAEEALPHEEKLETKKDLYKCVLCDVPAFTGPDALTDHLKAAHPDQIRAYMVKRHMRTHTGEKPYKCTYCERSFAQSNDMVKHMKTHKGPGRKPKQPKEESDNDTEEPKTKVDLYRCLLCDAPTYTSPKEHTDHLLKEHPDQIHCCKQCPKVFMTKAAFEHHQYCHATGRSFFCMFCDKGFQTEQLLKNHMRTHTHGTGFLCSHCGQEFSNRSNLRQHLIRHTGEKPWQCNLCPSRFSMKSKFTSSHHVKRHMLTHTGEKPFKCTYCERSFTQSNDMVKHMKTHVGENPYQCDRCEASFRLLTDLRNHYKDHYLPGGKDALSGEEDKDQTMTIQLTFCRICAVLSTEEHCIYEVAYSAGTLSMHAMMEKLVPSVFNAEQVKVDEFMSFPTKVCGSCKAKVLEAYGLYEQCVRSGDLLRDCLARKKNATFIVNITGAGGGGGGGGGGVDSSEGKIIVPLAYETEEVSVGGKPHTTTVVEITTEEIGPHCKVESEGESEMVEKHDDTADVLLETTEEPKLNPVQLRCLLCNRPAFAAPAELTQHLHSEHADQILRCTLCPKVFMTKAAFEHHQYCHATGRSFFCALCDKGFQSEQLLKNHMRTHTHGTGFLCSQCGKEFSDRSNLRQHEQRHTGEKPWACSMC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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