Agam011652.1
Basic Information
- Insect
- Anopheles gambiae
- Gene Symbol
- -
- Assembly
- GCF_000005575.2
- Location
- NT:37756206-37759203[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0029 6.1 6.5 3.8 1 27 151 176 128 188 0.63 2 11 0.086 1.8e+02 1.7 0.7 13 29 190 206 183 217 0.78 3 11 0.37 7.7e+02 -0.3 0.6 16 40 221 246 213 248 0.78 4 11 0.00038 0.79 9.3 1.2 18 41 251 271 239 277 0.88 5 11 0.00014 0.3 10.7 1.3 18 41 307 328 304 331 0.86 6 11 0.019 40 3.8 1.7 17 38 334 353 327 358 0.78 7 11 0.00014 0.3 10.6 1.3 18 41 364 385 361 389 0.86 8 11 0.0039 8 6.1 0.5 17 38 391 409 384 413 0.86 9 11 0.067 1.4e+02 2.1 6.1 16 29 417 430 406 442 0.78 10 11 1.4 2.8e+03 -2.1 1.3 14 26 444 456 436 458 0.75 11 11 8.4e-06 0.017 14.6 5.3 6 44 465 499 464 499 0.90
Sequence Information
- Coding Sequence
- GATAAAGCACAGCAGGAAGATTGCATCGgtgaagaagaggaaaagtTGGAGCTGGATGAGGAGGAGGTTGGCATACAGATGGCTTCAGAATCGGAAACCTCTGACATTGTGCCAAAAGAGCAATCGAAACAGGACGTCCTGAAGAGTAATGCAGACACCCGTCCTACCATACGGAAGCAAGTTCACAAACCACTCGCCACAAAGGGAAAGCGTGGACGCCCTAAATCGTACCGGGAACGTGTGGAGTCGCCAAAAGCGGaccaaaagaaagagagcgtgGAGCAGCCAAAGCACGACCCACCCCAGCATGCAGCCCGAAAGCAGCGACCCATGCCAAAAATCTGCACCATATGCGGGGTGGCGCGAACCGACATGGCCGCCCATATGCGCTGGCACAACAACGAGCGCCCGTATCAGTGTCCGCACTGTCCGAAGATATTCCTGAACAGCTCCAATCTGAAGAATCACATCAATCTGCACACGCGCGAAAAGCTGTACAAGTGTGATCTCTGTGATAAGGAGTTTGCCAGCACGACCGGGCGCAGCAAGCATCGGGAAATACACGCGACGGAGCGGGTGCACCTGTGCACCGTCTGTGGCAAGCGGTTCAAGTACCGCGCATCGCTGGCACGCCACAAGCTGATCCATTTCGAGGAACCGAAGCAGAAGTGCTCCGTCTGCGATATGATGTTTCTAACGAAAACCCGTCTGACGAAACACTTTATGGTGCACATGAACGTAAAACCGTTCAGCTGTGAGGTTTGCGGGAAAGCGTTCAACCGGAAGGACAATCTCAAAACGCACATGAAAACGCATGCGGCACAGCGGAAGCGGGAGAAAAAGCAAGAGCCAGCAGGAATTGTCTATTTGAACAATCTTGCCGAACATCGCCGGATGCATCTGAACATTCGCACCCAGCAGTGCCCGTACTGCGAGAAAACGTTCGTCCATCGTACGAATCTGATCACGCACCTGAACATTCACACGCACGATCGCACGTACAAGTGCGAGTACTGTGGCAGCGAGTTTACGAGCTATTTGAACAATCTTGCCGAACATCGCCGGATGCATCTGAACATTCGCACCCAGCAGTGCCCGTACTGCGAGAAAACGTTCGTCCATCGTACGAATCTGATTACGCACCTGAACATTCACACGCACGATCGGACGTACAAGTGCGAGTACTGTGGCAGCGAGTTTACGAGCGTGCAGGGACTGAAGCAGCACCGGGCGACACACTTCGAGGGCCAGTACGCGTGCACCATTTGCCACCGGAAGTACAGCCGCAAATGCTACCTTCGCGTCCACCATGAACGGGTACACAGGCCGAAGGAGAAGCATTGCTGTCTGATTTGCGACCGACAGTTTCTCAATCCCACGCTGAAGGAAAAGCACATGAAGATCCACGAGGACGGTACGCTACACGAATGCAGTCTGTGTCATCGAGCGTATAATGCAAAGCGAAATTTGCTAAGACACATACGAACGGCTCATCCGGAGCGAGGGCAGAGCGATAGCAGTAGCACGCCCTTGTCATGA
- Protein Sequence
- DKAQQEDCIGEEEEKLELDEEEVGIQMASESETSDIVPKEQSKQDVLKSNADTRPTIRKQVHKPLATKGKRGRPKSYRERVESPKADQKKESVEQPKHDPPQHAARKQRPMPKICTICGVARTDMAAHMRWHNNERPYQCPHCPKIFLNSSNLKNHINLHTREKLYKCDLCDKEFASTTGRSKHREIHATERVHLCTVCGKRFKYRASLARHKLIHFEEPKQKCSVCDMMFLTKTRLTKHFMVHMNVKPFSCEVCGKAFNRKDNLKTHMKTHAAQRKREKKQEPAGIVYLNNLAEHRRMHLNIRTQQCPYCEKTFVHRTNLITHLNIHTHDRTYKCEYCGSEFTSYLNNLAEHRRMHLNIRTQQCPYCEKTFVHRTNLITHLNIHTHDRTYKCEYCGSEFTSVQGLKQHRATHFEGQYACTICHRKYSRKCYLRVHHERVHRPKEKHCCLICDRQFLNPTLKEKHMKIHEDGTLHECSLCHRAYNAKRNLLRHIRTAHPERGQSDSSSTPLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00102515;
- 90% Identity
- iTF_00102515;
- 80% Identity
- iTF_00102515;