Agam001592.1
Basic Information
- Insect
- Anopheles gambiae
- Gene Symbol
- Bcl11b
- Assembly
- GCF_000005575.2
- Location
- NT:2774366-2775928[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.014 29 4.3 2.9 18 40 4 23 3 26 0.90 2 14 0.0013 2.8 7.6 0.5 18 29 32 43 28 54 0.82 3 14 0.34 7.1e+02 -0.2 0.3 18 28 60 70 49 77 0.82 4 14 0.0017 3.6 7.2 0.3 6 29 77 98 73 106 0.79 5 14 0.0019 4 7.0 2.1 18 41 115 135 108 137 0.89 6 14 0.033 69 3.1 2.0 18 35 207 221 203 230 0.74 7 14 0.0063 13 5.4 0.9 9 42 227 255 219 257 0.69 8 14 0.021 43 3.7 1.4 18 29 263 274 252 283 0.80 9 14 5.8e-05 0.12 11.9 0.4 9 38 283 307 279 312 0.80 10 14 0.0002 0.42 10.2 0.2 18 41 318 338 315 340 0.91 11 14 0.0097 20 4.8 0.5 18 28 373 383 361 396 0.86 12 14 0.41 8.6e+02 -0.4 0.4 17 28 400 411 385 418 0.79 13 14 7.6e-06 0.016 14.7 0.8 6 38 418 445 413 450 0.88 14 14 0.024 49 3.6 0.3 18 41 456 476 453 477 0.89
Sequence Information
- Coding Sequence
- CGACCCTACAAGTGCCACATCTGCGACCGTTCGTACCGCAACCAGAAGAACCTGAGGTCCCATCTGAAGGTGCACGAAGGCATTCGGGCGTACCAGTGCGAGATCTGTGGCAAGAATTTCTCCGGCTCCAGCTATCTGGTGATCCACCGGCGGCGCCATACGGGCGAACGGCCATTCAAGTGCGTCACCTGCGGGAAGGCGTTCGTCGATTCGCGAGCGCTGGCCGTGCACGCGCGCTTGCACAGCGGCGAGCGGCTCaagtgcgaaaagtgcgagAAAACTTTCTCCAGCGTGAGTGCCCTGACTGTGCACAATCGGCTGCACACCGGCATACACCCTTACCGGTGTGAGCTGTGTGGCAAAACATTCCCACAGTACAACAACCTGAAGCACCACATGAAGAAGCACGAGCAGCCGAGCGATGCAGAGCAGCTGCTGCCCCAAGCAATGGCGACCTCAACCGGTGGCCCCACACCACCGTCCAATGGGGTGAGCACTACGACGAGCGGCTCCGGCACTGTACTGGCGCGCATCAGTCTCTCGATACAGGCCGACACCACCGGCAAAGGAACGGTGCACATGATAGCCAGCTCGACCACCGGTCCGGCCTCCGAGTACAAATGCCACATCTGCAACAAGCTGTACAAATCCTCCGACGACCTGCAGGAGCACCTGAGCCAGCACAGCAAGGATCGGCCGAACCAGTGCGAGTTTTGCTCGAAAGTGTTTCCGCGCTCTTCCCATCTCATCATCCACCGGCGTCGGCACACGGGCGAGCGGCCCTTCAAGTGCAAATACTGCGACAAAGCGTTCGTTGACTCGCGCGCCCTCTCCGTCCACACGCGCCTGCACACGGGCGAGCGGGTCAAGTGCGAAATCTGTGAGAAAACGTTCGCCAGCTCTAGCGGTCTCATAGTGCACCGGCGCATCCACACCGGGGTGCATCCGTACAAGTGTGACTACTGCGAAAAGTCCTTCGCCCAATCGACGGCACTCAAGTACCATCTGAAAAAGCACGACACCGCCCTGCTACCAACCACGACCACGCCCGAGGCGTTCCGATCCTCCGAGTACCTGGTGCGCCATCGTCGGACGCACAGCGGTGAGCGACCGTACCAGTGCGAGATTTGCGGCAAGAACTTCTCCACCATGAGCTACCTAGTGATCCACCGGCGTCGGCACACCTCGGAGCGGCCGTACAAGTGTACCTCCTGCGAGAAAGCGTTTGTCGACTCGCGTGCGCTCCAGGAGCACGCCCGGCTACACACGGGCGATCGGGTGCGTTGTGAGATCTGCCAGAAAACGTACTCCAGCGTCAGCAACCTGATCGTGCACCGGCGCATCCACAGTGGCATTCATCCCTTCGAGTGTGACAGCTGTGGCAAATCGTTTGCGCAGAAAAATGCCCTCAAATATCACCTCAAGAAGCACGCC
- Protein Sequence
- RPYKCHICDRSYRNQKNLRSHLKVHEGIRAYQCEICGKNFSGSSYLVIHRRRHTGERPFKCVTCGKAFVDSRALAVHARLHSGERLKCEKCEKTFSSVSALTVHNRLHTGIHPYRCELCGKTFPQYNNLKHHMKKHEQPSDAEQLLPQAMATSTGGPTPPSNGVSTTTSGSGTVLARISLSIQADTTGKGTVHMIASSTTGPASEYKCHICNKLYKSSDDLQEHLSQHSKDRPNQCEFCSKVFPRSSHLIIHRRRHTGERPFKCKYCDKAFVDSRALSVHTRLHTGERVKCEICEKTFASSSGLIVHRRIHTGVHPYKCDYCEKSFAQSTALKYHLKKHDTALLPTTTTPEAFRSSEYLVRHRRTHSGERPYQCEICGKNFSTMSYLVIHRRRHTSERPYKCTSCEKAFVDSRALQEHARLHTGDRVRCEICQKTYSSVSNLIVHRRIHSGIHPFECDSCGKSFAQKNALKYHLKKHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00102495;
- 90% Identity
- iTF_00102495;
- 80% Identity
- iTF_00102495;