Afun004594.1
Basic Information
- Insect
- Anopheles funestus
- Gene Symbol
- PPP2R5C_1
- Assembly
- None
- Location
- Contig1:97828317-97834942[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 9.5 5.8e+02 1.0 1.4 2 23 237 259 237 259 0.93 2 14 0.0017 0.1 12.9 0.1 2 20 269 287 268 289 0.94 3 14 0.028 1.7 9.0 0.6 1 21 296 316 296 317 0.94 4 14 2.7 1.6e+02 2.8 4.9 2 23 430 452 429 452 0.96 5 14 2.4 1.4e+02 2.9 0.4 3 20 464 481 463 483 0.92 6 14 0.0045 0.27 11.5 2.4 1 21 490 510 490 515 0.94 7 14 4.9 3e+02 1.9 3.2 3 23 589 610 588 610 0.92 8 14 4.7 2.8e+02 2.0 0.4 1 19 623 641 623 643 0.92 9 14 0.001 0.063 13.5 1.5 1 22 653 674 653 678 0.94 10 14 0.35 21 5.6 3.0 2 23 745 769 744 769 0.85 11 14 0.00035 0.021 15.0 0.5 1 23 813 836 813 836 0.93 12 14 1.5e-06 8.8e-05 22.5 0.2 1 23 843 865 843 865 0.98 13 14 1e-05 0.00061 19.8 1.6 1 23 871 894 871 894 0.97 14 14 0.0038 0.23 11.7 0.5 1 21 900 920 900 921 0.96
Sequence Information
- Coding Sequence
- ATGATGCGGTTTTCGAAACGTAGAAAAGTCGCCAACACGGAAGAGAATGTCGCATCATCTCCAAACCATGATGACCAAAGCGACTGCCCGAGATGCTGCATCTGCTCTGTGCAGTCGAAAGGAGATCTACTTGAACTTTCTACGATTGTAGAAAACAGCGAACTTTCAACAATTGCCGCAATAGTCGAACATGTGGCCGGTATTAAGGTAAAACATGTTCAGAAAAGCATTTGCACTGGTTGTTGGAAGAAGATTCAAGCAGCCTACTCCATACAAAACGAAATCAGAAACTCAAAATGCATAGAACAACAGGAGAATGATGAGAGTGACGTACAGGACATTGAGCATGTCTATGTCGATAGAGAGGATTTCAACACTAGGGACACCGATTATGGCAGCGACGAGCAACATTTAGAAAAATCGGAAGACAAGGACGGTCATTTGGATTTGTCAGAACAACAGGAAAGCGAATACGAGATCGAATATCTCGAGGATAATCCGCTTGAACTTGCGGACGATAAGGAGCAACAGTCCGCGAATGACAATGAACTGGACATCGTGATTGAAATATCTGATGAACAGCAGCAGCATGAGGACGTTAAACCAGAGTATGGTAAAGTAACGCGTCAGTTCAAAATGCCCAATGCCGCCACGATCGTTAATGCTGAACTGCACGAGCACTACCGCGTGTTTCAGGTGGCAGGCGAACGTTGCTGTGGTTGCAGCTTCGTTGCCCAAACGCGCAAGGAGCTTTTGCAGCACTCGGAAACCGCGCATTGCGTTGAAATCAACGACTATGGTGACTATTGTCCGATTTGTTTCTACAAGTTTTCGACCGATCAGCAGCTCGAACGACACATCGAAGAGTTTAAGCTAAACAAGATGTTTGTCTGCTTGCGCTGCAATTATTTCTTCAATCTGCGTTCCCAGCTAGTTGACCATCTTCAGAGATGCAGGCAAGCTAAAGAAAGTGGTGACATGTTGCCGATAGAAAGCGATGAAGTGGATAACGATGAAGTATCCATCGAACCCATTCAGGAGGACGATGATGAGTTTGAAGAATATTATTTGCAAATTGACGCGGACACAATGGAACCGCACGACGCACGTCTCCAAAACGCAAAGGATCCACGTGTTATGCATTGCTACAAAACACTTTTCGAGGAGATACTATCTGATGAAAAGTTGTCTAGTACACTGACCGAAGCGGAACTGAACGTGCAGGACACACAAATAGCTGCTCAGCATGTTTTCGAAACGTTTAAGTACGTTCGCCTGCGAGGCCTTAGGTGCTGCGGCTGTTCGTATACCTGCTTTTCGAGTACGCTATTGGTGGAGCACAGTAAAACAAGCCATCCTACAGAAGGCAATGTTGTCACCGACCGTTCCTGTGGATTGTGTTTGGCAAAGTTCCCAAACGAAACGGAGCTTGTGAAACATTGGTGCTTTTTCATCACCAAGCAGCTGTTCTTCTGCACCGTGTGCGACGAAACTTTTCTTAACAAAGAAAGCTTGCGAAATCATCAACGGCACAACGATCGGCACCGGAAGCAGGAGAGCCACAAGCTTCAACGGGGAAACGAAATAGTCGGATCTGAAGCATTTGTTGAGATCGACCAACCGGGCGTTGCTGACGAGCTGGGTAAACTGTTGGCGGAAAAGATCACTTACCGCACGAAAGTAATACCGATGCCCGATGAGCGGTTCATAAAGATCAAACAAGAGTACAACAATTACAGCACCATCACCGTGGAAGGTGAATATTGCTGTGGATGTGCGAAATTATTCGATACAATGGATGAATTGCGGATACATTGCAAGACAGAGCACTATTCGCCGCTGAACTCGCAGGCACGTATTTACGGTCATCAGTGCGAATTCTGCTACGCCGTGTTTGATTTCGAACGGGGGCTTTTTATGCACAACGCTATTCGGCGCTCGAAGATAAAAATGCTGTTTGTTTGCAAGCTTTGCGGAATGCTTTTTTCGAAGAAGTTTTGTCTAGCGCGCCACATGCAATCAGCACCGAACCATCTGTCGAGGTTGATTGTCGATGCCAATGCAAACGCGAACCGCATTGGCGAGGGCGACGAGCTTGAGGAAGATTCGGAAGCATCCGGCAGCGCCCCGGCCGACTCGGTTGAATCCGATCCACGTGTTTTGGAGGCATTGCAGCTACACCGATCGGTTGAAGAAACGGGACTGGAGAAGGTCGGTCATCTCGTGTGGTATCACTGCTGCTTCACAAAATGTACGGAAACGTTTACGAAAGAAGAGGAACTACTGGAACATGCGCAGGAGGAGCATAATGGGCAACGGCGGGAAAATGCAATCGAACGAAAGCACGACGCAAACGTGTGTCCCGCCTGCTGCAAACCATTCCAAACGATTGCCAAACTGATGTGGCATCGAGTGAAACGATTTGTGCCCCGCAAATATCCCTGCAAGCAGTGCGAAAAGACGTTTAATAGTTGGCTCAAGCTGAAGATGCACGTGGAGCTTGACCACAGCGAAACACCACCCAGCTTCCCGTGTCCACAGTGTGGCAAATCGTTCGTAGTCAGGTCCAGATTGAAGGCACACCTAAAGATACACAGTGCACGGAAAGAACACACGTGTGACGTTTGCGGCAGTTCGTTCGTTAACAAGGGACTGCTGAAGCGCCACCGACGATCACTGCACTCCACCGATCTGCTGTTTGAATGTAAGCTTTGCTCGAAGAAGTTCGCTGTGGTGGAAAAGCTCAAAATTCATCAGCGGTTCTACGAGATTGAAACGCTTCCCCCGCTAAAGGATGCGGATCCGTCCGAGCGGGAGGAACTGTTCATCCAGAAGCTTCACCAGTGCTGCGTGCTGTTCGACTTCTCCGAGCCCCTGAACGATCTGAAGTACAAGGAGATCAAGCGGTGCGCACTGCAGGAGATAGTCGAGCATCTGAACAACCAGAGCAACGTGATTACGGAGGCGATCTATCCGGAAGCGTTCCATATGGTGGCGATCAATCTGTTCCGCACGCTCCCGCCCTCGTCCAACCCGAACGGGGCCGAATTCGATCCGGAAGAGGACGAACCGACGCTCGAGGTGTCGTGGCCGCATCTGCAGTTCGTGTACGAGCTGTTTCTGCGATTTCTCGAGTCACCCGACTTCCAGCCAAACGTGGCGAAACGGTATATCGATCACTGCTTCATACTGAATCTGCTCGAGCTGTTCGATTCGGAGGATCCTCGCGAGCGAGATTTCCTCAAGACGGTGCTGCACCGAGTGTATGGCAAGTTTCTCGGGCTGCGTGCCTTCATCCGCAAGCAGATCAACAACATCTTCTACAAGTTCATCTACGAGACGGAGCACCACAACGGGATTGCCGAGCTACTCGAAATCCTGGGCAGTATTATAAACGGGTTTGCCTTACCGTTGAAGGAGGAGCACAAGCAGTTCCTGCTAAAGGTGCTGCTGCCGCTGCACAAGGTGAAAAGTCTCTCCGTCTACCATCCGCAGCTCGCCTACTGTGTGGTGCAGTTTCTCGAGAAGGACGCCAGTCTGACGCAGCCCGTAATCAAGTGTTTGTTAAAATTTTGGCCAAAAACCCACAGCCCGAAGGAGGTGATGTTTCTGAACGAGTTCGAAGAAATACTGGACGTGATCGAGCCGGCCGAGTTTCAGAAGGTGATGGAACCGCTGTTCCGCCAGATCGCCAAGTGCGTTTCCAGCCCACACTTTCAGGTGGCCGAGCGGGCCCTCTACTACTGGAACAATGACTACATCATGTCGCTAATATCGGAAAATTCCAAAGTCATCATGCCGATCATGTTTCCGGCACTGTACAGCAACAGCAAATCGCACTGGAACAAAACGATCCACGGGCTTATCTACAACGCGAGCAAGCTGTTCATGGAGATGAATCAGCTGCTGTTTGACGAGTGCCACCGGAAGTACCAGGCGGAGCAGGAAATGGAACAGGAAAAGCTCGCGCAGCGGGAAACGCTCTGGCAGCAGATGGAGGATCTGGCCGTCCGCAACAGTAAGTTAACGCTGCACGATGAGCCGAGCAGTATGGGGGAACCGGGCAACAGCCGATCGACCGGCAGCAGTAACTTTAGCCACAGCCAGCAGCAACAACACCGTCAAATGAACGGGATGGCAGACGGTCGGACGACATCGTCCGGTGCAACGGGACCATCGTCTGCCGTGTACGATCGGCGTTCGATGCAACACAGTAGCACCTAA
- Protein Sequence
- MMRFSKRRKVANTEENVASSPNHDDQSDCPRCCICSVQSKGDLLELSTIVENSELSTIAAIVEHVAGIKVKHVQKSICTGCWKKIQAAYSIQNEIRNSKCIEQQENDESDVQDIEHVYVDREDFNTRDTDYGSDEQHLEKSEDKDGHLDLSEQQESEYEIEYLEDNPLELADDKEQQSANDNELDIVIEISDEQQQHEDVKPEYGKVTRQFKMPNAATIVNAELHEHYRVFQVAGERCCGCSFVAQTRKELLQHSETAHCVEINDYGDYCPICFYKFSTDQQLERHIEEFKLNKMFVCLRCNYFFNLRSQLVDHLQRCRQAKESGDMLPIESDEVDNDEVSIEPIQEDDDEFEEYYLQIDADTMEPHDARLQNAKDPRVMHCYKTLFEEILSDEKLSSTLTEAELNVQDTQIAAQHVFETFKYVRLRGLRCCGCSYTCFSSTLLVEHSKTSHPTEGNVVTDRSCGLCLAKFPNETELVKHWCFFITKQLFFCTVCDETFLNKESLRNHQRHNDRHRKQESHKLQRGNEIVGSEAFVEIDQPGVADELGKLLAEKITYRTKVIPMPDERFIKIKQEYNNYSTITVEGEYCCGCAKLFDTMDELRIHCKTEHYSPLNSQARIYGHQCEFCYAVFDFERGLFMHNAIRRSKIKMLFVCKLCGMLFSKKFCLARHMQSAPNHLSRLIVDANANANRIGEGDELEEDSEASGSAPADSVESDPRVLEALQLHRSVEETGLEKVGHLVWYHCCFTKCTETFTKEEELLEHAQEEHNGQRRENAIERKHDANVCPACCKPFQTIAKLMWHRVKRFVPRKYPCKQCEKTFNSWLKLKMHVELDHSETPPSFPCPQCGKSFVVRSRLKAHLKIHSARKEHTCDVCGSSFVNKGLLKRHRRSLHSTDLLFECKLCSKKFAVVEKLKIHQRFYEIETLPPLKDADPSEREELFIQKLHQCCVLFDFSEPLNDLKYKEIKRCALQEIVEHLNNQSNVITEAIYPEAFHMVAINLFRTLPPSSNPNGAEFDPEEDEPTLEVSWPHLQFVYELFLRFLESPDFQPNVAKRYIDHCFILNLLELFDSEDPRERDFLKTVLHRVYGKFLGLRAFIRKQINNIFYKFIYETEHHNGIAELLEILGSIINGFALPLKEEHKQFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDASLTQPVIKCLLKFWPKTHSPKEVMFLNEFEEILDVIEPAEFQKVMEPLFRQIAKCVSSPHFQVAERALYYWNNDYIMSLISENSKVIMPIMFPALYSNSKSHWNKTIHGLIYNASKLFMEMNQLLFDECHRKYQAEQEMEQEKLAQRETLWQQMEDLAVRNSKLTLHDEPSSMGEPGNSRSTGSSNFSHSQQQQHRQMNGMADGRTTSSGATGPSSAVYDRRSMQHSST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -