Afun006658.1
Basic Information
- Insect
- Anopheles funestus
- Gene Symbol
- ZNF711_1
- Assembly
- None
- Location
- Contig1:97787841-97791030[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.023 1.4 9.3 0.2 1 23 151 174 151 174 0.93 2 15 0.54 33 5.0 2.5 1 11 321 331 321 333 0.93 3 15 1.4 83 3.7 0.1 1 21 349 369 349 374 0.91 4 15 6.8 4.2e+02 1.5 4.4 3 23 399 420 398 420 0.90 5 15 0.0089 0.54 10.6 0.9 1 21 437 457 437 458 0.94 6 15 1.2 72 3.9 0.5 1 21 465 485 465 489 0.87 7 15 0.091 5.5 7.4 2.2 1 23 511 535 511 535 0.93 8 15 0.057 3.5 8.0 0.0 1 20 559 578 559 579 0.95 9 15 0.06 3.7 8.0 0.1 1 23 586 608 586 608 0.95 10 15 0.0048 0.29 11.4 5.5 1 20 614 633 614 636 0.95 11 15 9.8e-07 5.9e-05 23.0 2.1 1 23 641 664 641 664 0.96 12 15 0.0016 0.094 13.0 0.4 2 23 670 691 669 691 0.96 13 15 0.045 2.8 8.3 2.0 1 23 697 722 697 722 0.95 14 15 0.00026 0.016 15.4 4.7 1 23 728 750 728 750 0.98 15 15 2e-05 0.0012 18.9 0.0 1 21 756 776 756 777 0.96
Sequence Information
- Coding Sequence
- ATGAGTTCCAAACATTGCCGTATATGTTACAAATCCGATCAGGACGATCTAATTTCGGTACGACTATTGCTGGGCAACATAACGATCGAGGAGATGATACTGAACATCACAAGCATTTCAGTGTCTAGTGATTGTCGTTTGCCGCAAAATATTTGTCTGCAGTGCTTAGATCGATTGAAAGCAGCATACGAACTACGCCAGCAGTGCATCCAAATGAATGATCGACTGTGTGCGGAATTAGAATACAGCCGGGATTTGCCAAATACTGTTGTTGAGCAGAAGACACAAACTATACCCCAATCCAGCACAGTATCAGATGGGGATAAGAATGACAAAAATACGGTTGTTATTGAGATAATTGATGAGGATGTGGTGCACGAATCAAGCAATGAACCTGACCAGATAGAACACAACATTACGGCACATTATATTGCCATCAAAGAGAGAAATTTTGCTTGTTGTGGGTGTGCCATAGATTTCAGCTCACGGGATGAGTTAGAAGAGCACGTAGTGCGAACGCATTCGAATGGTAAAACATACCCTCAACAGCGTGTAGAAGATGCTAAAGAAGAAGATCCAGAGGCAAACGAATCCGTACAGAATGAAGAGTACATTCTGGAGGATTCCACTGATGATGAAGTTGAACTGTCCATTGATATCGACTTCAGCGATGCTGAAGAGGAAGAGGCAGCCGATGAAACCGATCTGGATACTGTGTTTGAAGAACCAACGACGATGAAATCCGCCGAACGCACAGAGCAAGCTAGCATACAAAGAGCATTGTGCCTTATTCCTGGAGAGAACTTGCTGGTTGTCTCACAGGAGCAAGGGTATGCCGTAGTGGAAATGCAACAGCATCGCTGTTGCTGCTGTGCACAGCTGTTCCCCACCGAAATGCAGCTAAACAACCATTTAGAACAACGTGAGCAAAACCGAGTTTCGGACGGTACGCGCGAACAGTATGCTTGCGAGTACTGTGGAAAACAGTTTACGTGCTGGTTGGTGTATGTTTGTCATAAGCGCATGCGAGAACAGCGACAATTTTACATGTGCACGTTGTGTAATGCGGTGCTAGACTCGGAGAAGCGAATGATATCGCACATGCTCATATCGGATGAGCATGCGAACCATTTCAACGTTTCCCGGGAAAGCATCGTGGATCGGTACAGAGCAATCGCACTACCCGGAAAACGGTGCTGTTGCTGTAAGAAATACTTTGATGACGAAGAGGAGCGGATGAAGCATATGCAGTACGTGCACGGTCTACCATCGGCGAGAAGTTCCTTTGATAAATCAACGAAACTACCGTATTGTTGTGGTGCTTGTGGCCGACGATTTCGAAACGAGCGCCTCGTGGAACGTCATCTGCAGTATACGGTGGACATTTTACAATACTACTGCAATCTGTGCGACTTTGAAACGTACAATCCAAGGCGCATGGAACTGCATCTTTACTCTGGACTTCATCGAGATACGTTACCGGTAACGGTTGAGCTGAAGCCACTGCAAACGAAACCATCGCCCTCACAGTACTGCTGTTTCGATGGATGTGAACAACATTTCCAGAATGAGCCGGCTCTAAAGCAACACATAAACCTATCACACCAGCAGGTGTTGGAAGCGAACCGAATCCAGACGAAAAAGTTGAACCGAATTCTGCAATCGCAATCGTACCACGAATGTAACGTTTGCAGCGTGCTGTTCAAGTCGATCGGTGCGTTGCAGGCACACCAAGCACCAAGCGCCCGGAAGGGCTATTTGTGCGTAGTGTGTGGCGTATCAAAGCGAACCCGTGCGGCATTACGTGTCCACGAACGATCACACACCGGTGAGCGACCGTTTCGGTGTGAGGTTTGCGATAAAACGTTCCACACCAACCGTACGCTTCTTTCGCATCGTAGCTGCCACATCACGGGCCAGCATAGGTGCAAACTTTGTGGCCTTGTGTTTAATCGAAAAGAAAATCTTAACCGGCACATTATGCTCAAGCACGGTGAGGCGACGATCCAGTGTGACCTTTGTCCGAAGAAGTTCAAAACCGTTACCGTGCTGAACATACACAAACTTTCGCACACGGGCGAGAAGAGGTTCAAATGCCGGACGGAAGGGTGTGACAAACGCTACATCACTGCATGCGATCGACGGCGGCACGAGATGTCGGTGCATACGTTCGAGCGGCCACACAAGTGTTCCTTCTGCAATGCGGCGTTCATCCGGAAGCATCAGCTGACGGTGCACGAGCGACGGCATACGGGCGATAAACCATTCGTGTGTCCGATCTGTGGGAAGGATTTCGTTGAAGCATATCCCTTGCGGAACCATATGCGCAACGTCTGCCAACAAGCGTTAGTGGAGTGA
- Protein Sequence
- MSSKHCRICYKSDQDDLISVRLLLGNITIEEMILNITSISVSSDCRLPQNICLQCLDRLKAAYELRQQCIQMNDRLCAELEYSRDLPNTVVEQKTQTIPQSSTVSDGDKNDKNTVVIEIIDEDVVHESSNEPDQIEHNITAHYIAIKERNFACCGCAIDFSSRDELEEHVVRTHSNGKTYPQQRVEDAKEEDPEANESVQNEEYILEDSTDDEVELSIDIDFSDAEEEEAADETDLDTVFEEPTTMKSAERTEQASIQRALCLIPGENLLVVSQEQGYAVVEMQQHRCCCCAQLFPTEMQLNNHLEQREQNRVSDGTREQYACEYCGKQFTCWLVYVCHKRMREQRQFYMCTLCNAVLDSEKRMISHMLISDEHANHFNVSRESIVDRYRAIALPGKRCCCCKKYFDDEEERMKHMQYVHGLPSARSSFDKSTKLPYCCGACGRRFRNERLVERHLQYTVDILQYYCNLCDFETYNPRRMELHLYSGLHRDTLPVTVELKPLQTKPSPSQYCCFDGCEQHFQNEPALKQHINLSHQQVLEANRIQTKKLNRILQSQSYHECNVCSVLFKSIGALQAHQAPSARKGYLCVVCGVSKRTRAALRVHERSHTGERPFRCEVCDKTFHTNRTLLSHRSCHITGQHRCKLCGLVFNRKENLNRHIMLKHGEATIQCDLCPKKFKTVTVLNIHKLSHTGEKRFKCRTEGCDKRYITACDRRRHEMSVHTFERPHKCSFCNAAFIRKHQLTVHERRHTGDKPFVCPICGKDFVEAYPLRNHMRNVCQQALVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -