Afun004652.1
Basic Information
- Insect
- Anopheles funestus
- Gene Symbol
- ZBTB26
- Assembly
- None
- Location
- Contig1:55860026-55865744[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.0028 0.17 12.2 0.8 2 23 269 291 268 291 0.95 2 16 3.3 2e+02 2.5 3.3 2 23 327 349 327 349 0.93 3 16 0.00074 0.045 14.0 4.9 1 23 363 385 363 386 0.95 4 16 1.6 97 3.5 0.2 3 23 402 423 400 423 0.82 5 16 1.1 70 3.9 0.5 1 23 429 452 429 452 0.94 6 16 0.16 9.8 6.6 2.3 2 23 459 481 458 481 0.91 7 16 2.9e-05 0.0017 18.4 1.7 1 23 513 535 513 535 0.98 8 16 3.2e-06 0.0002 21.4 1.4 1 23 541 564 541 564 0.97 9 16 1.9e-05 0.0011 19.0 0.8 3 23 572 592 570 592 0.98 10 16 0.0046 0.28 11.5 0.8 1 20 598 617 598 619 0.90 11 16 0.018 1.1 9.6 0.3 2 23 660 681 660 681 0.95 12 16 3.3e-05 0.002 18.2 5.1 2 23 688 709 687 709 0.97 13 16 9.2e-08 5.6e-06 26.3 0.7 1 23 716 738 716 738 0.98 14 16 0.00022 0.013 15.7 2.1 1 23 744 766 744 766 0.97 15 16 2.3e-06 0.00014 21.8 1.8 1 23 797 819 797 819 0.98 16 16 3.7e-06 0.00022 21.2 0.5 1 23 825 847 825 847 0.98
Sequence Information
- Coding Sequence
- ATGCATTTTCAAAATTGTGTATATATCTTGGGTACGAGACCATCTGTCATTGATGCATTCAGCATTTTCAACCATGCACGTAGCCATATCATTCCATCGAACAACGAAGTGGAAGAGATCTACATTGTGAAACAAGAAGATGATTTAGAGGGATCGAACTTGAACCCGCTGATTTCTGGAACAAGTTCAGGATTTGTTTCGGAAGCGTTTGTAAACGAAGATGTCGAAATTAAGATCGAACAGGAGATTGAATATTTTCCGAACGAAGATTCATCTGAAAACTACACGTCTCGAGACAATTGTAAACAGACAAGTAACATTGATTCTATTGAAGAACATACATCACAAGAAAACGCTGATAAGAAAGAAGACACGAGTGAAAGGAACCGAGAATGGTATGTAGCGGAAACTAACCCCCATGTAACTGTTGTAGCTCGTCCGAACGATGGTGTTGGCGAAGTATATTACCCGGAAAGTGTTAACAATGAGCCGATCGAAGAAGGACAACGGTCAAAACAGCGCGTTGGTGATCATTCGAACAATGGAGACATTCACGTATTTGTTGCTCAAGAAGAATTAAGTTTAGATGACGCTGATGCTAACGATGATTGCAAGTTGAAGACGCGACGTCGTAAGGATGATCAACAACCGAAACGACGGAAGGTTGGCAGACCGCGGAAGAAGGTGTCAGAACGGTTGGAGGACTGGCTCGTTTCTTCCAGCAGCAAGCGGCGGCAAAGTCACACGTATCAAACAGATGAAACGTACACCGGGGCAGATGAGATGGAAAAAGAAGATACAACTCAGTGCTATATTTGTCGAAAGGAATTTACGTTACGGGCGAAACTAAACGAACATCTTCAAAACGAGCACGCGAAAGATATTCCATTCAATTGTAAAATGTGTGTTTCGGAAACGATTACCAATTTACATCGTTTAAATTTGCACCATCAGCAGCATGATTTGACGTTGAAGCGCCGCTGTCACAATTGTCCAGCCCGATTCTCTTGTGGCCAAGCCGTTAGTAGACATATGCGTAACTTACATCAATTACAGTACGAAATCGATGCGGAAAAGAATAGACGCTTTGTGTGTCGTTACTGCGCTCAAAAGTTTACCAAAAAGTATGATCTGGAAAAGCACGAAAAGAAACATCACGTGGAACAATCGAGCGACGAAGAGTACTTGAAGCGTGAGTTGATGTGTTACATCTGCAATGATTTCATTGGTAAATCTCGCGAAGATCTTAACGAACATGTTCGTATGCACTCGGATTGGTTGCCGTATCAATGTGGCCAGTGTGATAATAAGATGATAAATTCAACCAGAGTCCTGCGGGAACATCTTCGTCAGCATGCTGCCGGACTGGCCATTAAGTGTGTCTATTGCGAGAAGCGTTTCGCAACGTTAGCTGACTGCCAGCATCACGAGGAACGGGAACACGTACAAGAGAAACACTTGGATGAGCTGCAAGAAGCGAAAATACAGTCTGAAATACACGGCACGAAAGTTTTAGTTACTGATGGACAAAAGCGTTTCCAGTGTCAGAGCTGTGATCGTTCGTATACGTTGCTAAGTACATTGCGGCGCCACCAGAATGTTCACACGCTGGAAAACAAATTCGAATGCAAATATTGCGGGAAAGTGTTTAACAAATCTTCCACGCTCGTTATGCACGAGAAACGGAATCACGACGAAAATAGTCCTTACGGTTGTGATGTTTGTGGTAAACGATTCAAGGAAACGAGCAAATTAATTGATCATCGCCGTACCCATTCTGGGGAGAAACCGTTCATTTGTGAGGTTTGCGGTAAATGTTTCCGGATTCGGCAGGTACTGAAAGAGCACAAACTCAGTTGCTTTGGTCCTGAAGCCATTCAGTCGTGTCACTGTGTGCTCTGTGCACAAACCTTCGCCAGCCTTTCCATTGCACTGCAACACGTGAAATCCGAACACGAATCGGATATGTCTGATAGAAAGTGCCGTTACTGTGATTTAATCTTTCGGGAGGCAGAATCATTGGTTGAACACGAATTCCGTCATACACTGCCAGGCATAATCACGTGCAACATTTGTAATCGCATCTTCAAGCATCATAAAAATCTAATGCGCCACGTGAAGATGCATGCCGATCAGCCGGTACCGTATATGTGCGATTTGTGTGGCAAAACCTTCACGCAGAAGGGCTCCCTAACGATCCATCGTCGTATACATACAGGAGAGCGTCCATTCTCGTGCCAGCTGTGCCAGAAAGGATTCGTCGATAAGAAGGAAATGCGTCGACACTATACATCCCACTTTAATCCCCAAAGTAAATTGTACATACCGAATGCGCAGTCTATAGCAATGCCCCCGGAAGCTGGTCCTACTGGAAAGAAATACAAGACGTATAATTGTAAAGTCTGCAGTCGGCAATTTACGTCTAGCTCGAACCTTGCTAAGCATCTAACAACTCATACTGGTGAAAAGAAATATGTTTGCGAGTTCTGCGATAAACGGTTCAGTCAGGGCGGGCAGCTGACAGTACACAGGCGCATACACACAGGAGAGCGTCCATTTGCGTGTGATAGCTGTGGTGATAGATTTTTGGATGGAAGCAGTTTTAAACGCCACAAAACACACCACCTGTGCCGTGTAATTACTTCATCGCCACTTAGTGTACGTACCGGTGCTGAAGATTCACAAATAGAATTGCCATTATCAATCGAATATACTAATTCTATTCCTAAAGTAGAAAGTACACGATAA
- Protein Sequence
- MHFQNCVYILGTRPSVIDAFSIFNHARSHIIPSNNEVEEIYIVKQEDDLEGSNLNPLISGTSSGFVSEAFVNEDVEIKIEQEIEYFPNEDSSENYTSRDNCKQTSNIDSIEEHTSQENADKKEDTSERNREWYVAETNPHVTVVARPNDGVGEVYYPESVNNEPIEEGQRSKQRVGDHSNNGDIHVFVAQEELSLDDADANDDCKLKTRRRKDDQQPKRRKVGRPRKKVSERLEDWLVSSSSKRRQSHTYQTDETYTGADEMEKEDTTQCYICRKEFTLRAKLNEHLQNEHAKDIPFNCKMCVSETITNLHRLNLHHQQHDLTLKRRCHNCPARFSCGQAVSRHMRNLHQLQYEIDAEKNRRFVCRYCAQKFTKKYDLEKHEKKHHVEQSSDEEYLKRELMCYICNDFIGKSREDLNEHVRMHSDWLPYQCGQCDNKMINSTRVLREHLRQHAAGLAIKCVYCEKRFATLADCQHHEEREHVQEKHLDELQEAKIQSEIHGTKVLVTDGQKRFQCQSCDRSYTLLSTLRRHQNVHTLENKFECKYCGKVFNKSSTLVMHEKRNHDENSPYGCDVCGKRFKETSKLIDHRRTHSGEKPFICEVCGKCFRIRQVLKEHKLSCFGPEAIQSCHCVLCAQTFASLSIALQHVKSEHESDMSDRKCRYCDLIFREAESLVEHEFRHTLPGIITCNICNRIFKHHKNLMRHVKMHADQPVPYMCDLCGKTFTQKGSLTIHRRIHTGERPFSCQLCQKGFVDKKEMRRHYTSHFNPQSKLYIPNAQSIAMPPEAGPTGKKYKTYNCKVCSRQFTSSSNLAKHLTTHTGEKKYVCEFCDKRFSQGGQLTVHRRIHTGERPFACDSCGDRFLDGSSFKRHKTHHLCRVITSSPLSVRTGAEDSQIELPLSIEYTNSIPKVESTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00105292;
- 90% Identity
- -
- 80% Identity
- -