Afun010418.1
Basic Information
- Insect
- Anopheles funestus
- Gene Symbol
- bab1
- Assembly
- None
- Location
- Contig0:65074400-65085801[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2 4.6e+03 -2.8 0.0 29 36 226 233 226 240 0.80 2 3 4.3e-13 9.2e-10 37.8 0.0 1 45 473 517 473 517 0.95 3 3 0.018 37 3.9 0.8 4 20 646 661 645 661 0.93
Sequence Information
- Coding Sequence
- ATGGGTAGCAGCGAAGGACAAACATACTGCCTGCGATGGAACAATCACAAATCCAACCTCGTCGAGATACTGGATGCCCTGATCAAAATGGAATGTTACGTCGACTGTACGATCTACGTCGACGATCAGGTGCAGTTCAAGGCGCATCGTGTTGTGCTCGCCGCCAACTCACCCTACTTCCAGACGATCCTGCAGGATGTCCCGATGGATCACTGTAGCATTCTGTTCCCGGGTGTGCAAGAGTTTGAGATGCGCGCACTGCTCGAGTACATGTACACCGGTGAGGTGAACGTAACTCAGGCACAGATACCGCGCATCATGAAGATTGCCGAACAGCTGGAAGTGAAGGGCCTATACGATATGGCGGACCTGAAGGGTCGCTTCAACAAAATGGTCGATGTAGATCATTTGATGCGTGATCGCGACCCGGCCACAACACTGCTCGCTAGCAACAATAACTACAGCAGCAAAGGGTCGTCAACTGCTGGATCAGGAGCGGCGACAGCTTCGTCCTCTTCGTGGAAGGATGCCCCACCAACGAGTAGTAGTGGCGGAGGTAGTAGTCACTACTCACACCACCAATATCAGCATCAGTCATCGCCAGTCATTTCGACCTCGACGAACATTTCGATTGCTCAAAGCAGCAGTTCCTCACCGCCGTATTCGTATAAATCGCCGTACTCCAGTCTATACTCACGCAGTCCCGGTGCTGTAGAGCGTGATCGCGAACGGGAAGAACGTAGCCGCGATCGCTCCTCATCATTCTCACATACGGCCACCTCTCCGCATCGTATCCAGTCCACCTCGGGTTCCTCGGCATCATCGGTTTCGGCACAGATAGCGCTACAATCACAAGGCGGCAACCATCAATCGTCCACACATCAGTCGAGCAGTTCCTCCAGTGCTAACTCAGCATCGGCTCAACCGTCGACAGCTGCAGCAGCCGCGGCACTAGCTGCCGGTTGGCCAGGACTCGGTCAAACACAGCTGCACAGCATGCTGAGTTCAGCGTACGATTCCAGTACCGATATGAATCCGCTCAAGCGCAAGAAATTGCAATCCATGTCCAGTATGCTCCGAGATACTCCAATTCTGCGAAATGTACTGGCGCAAGCAAATCCGGCCGACTCTTCTCAAACATCCGGCGGAGTTGTTCCGGCGGGTGCAGCAGCAACGGTCGCCACGATACAAACGATTCAAGGTAGCATGAAGTCCGATCCCGAGAGACCCAGCAGTCATCACTCCAATGGCAGTGGTTATAAGTCAATCAAGGAACCATCGCATTCTCCGTACGCGGACAAATCCTACGATGATGACCTGCTGGACTCGCCGCACAATTTTGGCGGAGATGCTCGGTTGGCTTCGTACGTGCCACATCAACAGCAGAAACCGGAATGGAAGCGCTACAAACAGTACACCCGTACGGACATCCTTAACGCGATCGAGTGTGTGCGCAAGGGTATGAGTGCGTTACAGGCATCGCGTAAGTTTGGTGTCCCATCGCGCACCCTTTACGATAAGGTAAAGAAACTGGGCATTACCACCGGACGTCCGATCAATAGGGCGCTAAAACGATCGCCCAGTTCCAGCGGTAGTCCGGCATCGTTCCCGTACGGGTTAAGCGGTGCTAGTCACATGTTCGGTCCAGGCAGTGGTGCACCCGGTGGTTCACATCCGGGTGATCATCATCAGCAAATGCCATCTCAGTCACAACAGCAAGATGATGAAGGATCAGCAGCTGCAGCTGCTGCGGCAGCGGCTGCCATGGCACACCATGACGCTGGTCGCATGATTAAACTGGAGCACGGAAGCCATCACGGATTGCCACCTACGATCCCACATCCTGCTGCTGCCTTGCTTGATCCTTCCTTTCTGCAGCAAGCACTGGAAGCCCGCGGTGGAGACATAGCAGGCCGTGAGGCACTGCACGCGATGGCCTTTGCGGCGGCTGCTCATGCGGCTGTTAATGGTATGAGCACGTCCCCGGGCACGCACGGAACTGCACGTTCGCCAAGCCCAAGCGTACTGATGAAGTACATGCGCTCGGTCTCGATGAGCTCTCCCGAGGATGAACGTCATCATCCGGCGCAACAGCAGCAGCGAGAACGAGAGCGAGAACGAGATCTAGCCGAAGGACATCCTCATCACCATAATGGATCGGATCCGGTCTATGCTAGGCGTGATCATCCGATGGAACAGGATTCGATCGACGATACGGGTAGTGACTGTGGTGAACGACCACCGAGTGGTCCGGGACCGGTGGAGGGACAGGATGATCACGTGGAGGATCTGTCCATGGGCCCGAAGCGTGACTCAGAGGAACGAGGACCTTCGGTATCGCCACCACCGTCGTCAGTCGTTCGTGTAACGCAACGATCGCGATCACCTTCACCCCAACCGGCTCCACCATCCCTACCACCCCAGCAGCAGGGTGTCATCGTGCCAGCACCCGGTAAGTTAAAGGAAGACTACAACATCCCCATCAAGCGGGAAATTATCGCCGACAGTAACGCACCGTCAGAATCGTCGTAG
- Protein Sequence
- MGSSEGQTYCLRWNNHKSNLVEILDALIKMECYVDCTIYVDDQVQFKAHRVVLAANSPYFQTILQDVPMDHCSILFPGVQEFEMRALLEYMYTGEVNVTQAQIPRIMKIAEQLEVKGLYDMADLKGRFNKMVDVDHLMRDRDPATTLLASNNNYSSKGSSTAGSGAATASSSSWKDAPPTSSSGGGSSHYSHHQYQHQSSPVISTSTNISIAQSSSSSPPYSYKSPYSSLYSRSPGAVERDREREERSRDRSSSFSHTATSPHRIQSTSGSSASSVSAQIALQSQGGNHQSSTHQSSSSSSANSASAQPSTAAAAAALAAGWPGLGQTQLHSMLSSAYDSSTDMNPLKRKKLQSMSSMLRDTPILRNVLAQANPADSSQTSGGVVPAGAAATVATIQTIQGSMKSDPERPSSHHSNGSGYKSIKEPSHSPYADKSYDDDLLDSPHNFGGDARLASYVPHQQQKPEWKRYKQYTRTDILNAIECVRKGMSALQASRKFGVPSRTLYDKVKKLGITTGRPINRALKRSPSSSGSPASFPYGLSGASHMFGPGSGAPGGSHPGDHHQQMPSQSQQQDDEGSAAAAAAAAAAMAHHDAGRMIKLEHGSHHGLPPTIPHPAAALLDPSFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGMSTSPGTHGTARSPSPSVLMKYMRSVSMSSPEDERHHPAQQQQRERERERDLAEGHPHHHNGSDPVYARRDHPMEQDSIDDTGSDCGERPPSGPGPVEGQDDHVEDLSMGPKRDSEERGPSVSPPPSSVVRVTQRSRSPSPQPAPPSLPPQQQGVIVPAPGKLKEDYNIPIKREIIADSNAPSESS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00101774;
- 90% Identity
- iTF_00099760;
- 80% Identity
- iTF_00101774;