Afun008877.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anopheles funestus
Gene Symbol
bab1
Assembly
None
Location
Contig0:13690896-13819197[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-17 4.1e-14 51.8 0.0 1 43 596 639 596 641 0.95

Sequence Information

Coding Sequence
ATGCCATCGGACACACCTCCACCATCAGCATCGGTGTCCCATCCGTCACCAGCTTCGAGCCACGACCCGAACGATTCCACGCACCGGGAACCGAACTCGAACGTTTCCCGGCAGGAGCCGGACCGTTCGTCCACCGGTACGCCGGGACCCTCCGAACAGGCGACCCATCTGCATCCACCGCACAGTACGTCGAGTTCGTCCTCGTCCAGCTCATCATCGTCATCGTCCAGTACGTCCTCGTCGCTGTCATCACTCTCGCTGAAACGAGCGCTTGTTCCCGAGGAGCATACCACGAAACCTTCGCCACCACCATCACCCCTAACGATGGAGCATCATCTGCAGGCACACAAAGCTGCCCGGACGGTTTCGAGTCCCGGTGGCCGTAACCAACAGCAATCAGGTTCGAGCACAACTGCCGGTGCTGGCACTGGACAGCAGTTTTGTCTGCGCTGGAACAACTACCAAACGAATCTGACGAGCGTGTTCGATCAGCTGCTCCAGAGTGAGTCGTTCGTGGACGTTACGCTCGCCTGCGATGGCCAGTCGATGAAAGCCCACAAGATGGTACTGTCCGCGTGCAGTCCCTACTTCCAGACGCTGTTCTTCGACAACCCTTGTCAGCATCCGATCGTGATTATGCGCGATGTTAGCTGGGCCGAACTGAAGGCGATCGTCGAGTTCATGTACAAGGGTGAGATCAACGTCAGTCAGGATCAGATTGGGCCACTGCTGAAGGTGGCCGAAATGCTGAAGATACGCGGACTGGCGGATGTGAGTGGCGATGCGGGTGAGTCCGGTGGTCGGGATCGATCCGAACGGGAAGGGGCCGAAAGTCGTGGTCCGGACGACTTGGATCGTGAAGATCATAAACTACTAAATCCGCTTGCGATCGTACATAGTTCACTGTTGGCCAACGGTGCCGGAAGTGTAACGGCTGGCACAGGAGGTACTGGATCCGGGACTGGTGGGTCTGGCACCGGTGGAAATACATCCGGAGCCGGTGGAAATGGTTCCGGAAGCTCCGGGGGCAACAGCACGGCGACAAGTGGTAGTGCAGCTGCTGCAGCAGCGGCGGCAGCAGCCGCAGCTAAGAAACAGCGATCGGCTCGTGATCGCGACCCGACCAAAGATCATCGGATGGATGCACGCATGAGTGAGTTCGCACGTGATCTGTCCCGTGACCCGCATATATCGTCGCGTGACATTAGCAGTGTAGCGGCGGCAGCAGCGGCTGCTGCGGCAGCTGCCGGGCTGGCGGCCGGTGAGTGGCCGCTCGGGGCGGCTGGTTTGGAGGCGGCGGCAGCGGCCGCTGTTCAAGCCTCCACACCGAAGAGTGCCCGCAAACGGCGTTGGCCCTCGGGTGAGCGTAGCAGCATCGGCAGTCCGGCGGACAGTACGCCCGATCACCTCGAGGTACCGTCTCCGATTCCGCCCACACCGTCCAACATTGCACAGTCGAGTGGTGGCGCGACGAGCAATCCGCTTGCTTCGTTCCCGCTGCCACCGGCGCTCGATTCGGCCGCCATGGCCATGTCATCGCTGTCATCGTCCATTGCCAACCATCCGGACGATATGGAGATCAAGCCGGGCATCGCCGAGATGATTCGCGAAGAAGAAAGGGCCAAACTGTTAGAAAACTCCCAAGCATGGTTAGGCGCGTCTACGTCATCAATTGCTGCAGAAAGTTACCAATATCAGCTACAGTCCATGTGGCAGAAATGCTGGAACAGCCAGAATCTGATCCACCATCTGCGCTTTCGTGAGCGAGGTCCACTAAAATCCTGGCGCCCGGAAACGATGGCGGAAGCGATCTTTAGCGTGCTGAAGGAAGGACTGTCGCTGTCACAGGCGGCCCGCAAGTACGATATTCCGTATCCAACGTTCGTGCTGTACGCGAACCGTGTCCACAATATGCTTGGACCATCGATCGACGGTGGTACCGATCTGAGGCCGAAAGGACGCGGACGACCCCAGCGCATCCTGCTCGGTATTTGGCCCGACGAGCACATCAAGGGTGTCATCAAGAGTGTCGTCTTTCGCGATGCCAAAGAGATGAAGGAGGAACCCATGATGTACGGTAGACACTCTCCTTTTCCCTTTCAAGACAACCCCCTGAGCTACGCACCGACTGCACCGAACGGTCAGCTGCCAGCCACCACCGGTACGGTCCCGGACGGTATGTCCCAGGACGCCCTGACAGCCGCCACGGTTGCGGCTGTCCGTCAGCAGATGTGTAACATGGTAGCCGCCGCCCAGCACCATCCGGATGCTGCCAATCTCGTAGCGGCCGGGTTCAACCTACCGTCTCACTGTGGCACTCCACCGAATCTAAGCATCCATCCGGCCGCTACGGCGGCCAATGCAGCGGCTGCTGCGGCTGCCGCTGCTGCAGCTGCGGCCGCCGCATCGAACCAGGGCAGTGGACCGAACTCGGGTGGCGGTTCAAGCGGTGCCATTCCTTTGCCGAAGATGGGTTCGCCGGCCGTTCCGTCGACCGGCCACGGTAACAACAATGGCGGATCGGGCGGCATACAGATGCCACGGTTAGGATCGCCGGCCGGTTCGAGCGGGTTGGCGAAGGAACACGAGCTACAGCACCATGGCGGAGGTGGTCTCGGAGGTGGTGGAGGTAACAGTGGTGCGGGTGGCGGTTTATCTCGTGCCACACCACCGGGTGCCCGGGATCGTGCACTAACGGCACGATCCAACCTCACCGCCAGTGAATCGGGTCGCAGTAGTTCGGCCGGTGGTAACGTGCACAGGTCATCACCTTCCAGCAGTACCGCTTCGTCTATCAACCATCACCACCATCAGTCACATCTTTCGCATCATCATCACCATCAGCACCACCAGCCACACCACGGACATGGTCACCATCTTCCGCACCACAATCCACTGTCACATCTGGTGAGTTCTGGTGGATCCGGAGGTCTGAGCATAACGAAGCTCGGATCACCCGGATCGGCGCATGATCTTCGCATCAGCAATAGCCCGGACGAGAGTCCACTTGCATCACCGATCGGGATGGTACTGGAACCGGCCGTTAATCTAGCACTCGGGGCAGGATCTCAACCACCCGAGGATGTACGTCTCCACGTTCCACCACCGTACGGCAGTAAACCACCGTCTCGGGGTGGTTCGACTGGATACACTAGCAATTCGTCCCCACCGCGACCGGAACACCTGTTCCAAGATCAGGACATTGCGGCACTGGTAGCAACGACACGCGCCTGTCCACCATCTCGTGTGCCAGACTACAAGGACAGCCCGGTAAGGCCACCGGCATCAATCAAGGTGGAACCACTGACGGAGTGTCGGGGAGATTAG
Protein Sequence
MPSDTPPPSASVSHPSPASSHDPNDSTHREPNSNVSRQEPDRSSTGTPGPSEQATHLHPPHSTSSSSSSSSSSSSSSTSSSLSSLSLKRALVPEEHTTKPSPPPSPLTMEHHLQAHKAARTVSSPGGRNQQQSGSSTTAGAGTGQQFCLRWNNYQTNLTSVFDQLLQSESFVDVTLACDGQSMKAHKMVLSACSPYFQTLFFDNPCQHPIVIMRDVSWAELKAIVEFMYKGEINVSQDQIGPLLKVAEMLKIRGLADVSGDAGESGGRDRSEREGAESRGPDDLDREDHKLLNPLAIVHSSLLANGAGSVTAGTGGTGSGTGGSGTGGNTSGAGGNGSGSSGGNSTATSGSAAAAAAAAAAAAKKQRSARDRDPTKDHRMDARMSEFARDLSRDPHISSRDISSVAAAAAAAAAAAGLAAGEWPLGAAGLEAAAAAAVQASTPKSARKRRWPSGERSSIGSPADSTPDHLEVPSPIPPTPSNIAQSSGGATSNPLASFPLPPALDSAAMAMSSLSSSIANHPDDMEIKPGIAEMIREEERAKLLENSQAWLGASTSSIAAESYQYQLQSMWQKCWNSQNLIHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKSVVFRDAKEMKEEPMMYGRHSPFPFQDNPLSYAPTAPNGQLPATTGTVPDGMSQDALTAATVAAVRQQMCNMVAAAQHHPDAANLVAAGFNLPSHCGTPPNLSIHPAATAANAAAAAAAAAAAAAAASNQGSGPNSGGGSSGAIPLPKMGSPAVPSTGHGNNNGGSGGIQMPRLGSPAGSSGLAKEHELQHHGGGGLGGGGGNSGAGGGLSRATPPGARDRALTARSNLTASESGRSSSAGGNVHRSSPSSSTASSINHHHHQSHLSHHHHHQHHQPHHGHGHHLPHHNPLSHLVSSGGSGGLSITKLGSPGSAHDLRISNSPDESPLASPIGMVLEPAVNLALGAGSQPPEDVRLHVPPPYGSKPPSRGGSTGYTSNSSPPRPEHLFQDQDIAALVATTRACPPSRVPDYKDSPVRPPASIKVEPLTECRGD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00105069;
90% Identity
iTF_00101755;
80% Identity
iTF_00101755;