Afun011657.1
Basic Information
- Insect
- Anopheles funestus
- Gene Symbol
- ttk_1
- Assembly
- None
- Location
- Contig0:32846035-32847540[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.3e-09 1.1e-05 24.7 0.1 3 36 281 314 279 319 0.90 2 3 0.0089 19 4.8 0.0 23 37 350 364 335 371 0.83 3 3 8.1e-12 1.7e-08 33.8 0.1 4 38 391 425 389 431 0.91
Sequence Information
- Coding Sequence
- ATGGCGGTCGAATCGTGCGTGAAGTGGACAAACTTTCAGGAGCACATGATGTGTGCTATGCATGAAATCTTGGAATCCCACCAGTACACCGACTGCCGATTGGTCGTACCCGAAGGAGAATTGTATGCAAATCGAGCAATACTCTGCATGGCTTCAAGATTCTTCGAGGCAATCTTCGATGGTGCTATGAACTTGTCTGCTATAGAGACGGATCGTCTCACGGTTCTCATTCCAGATCTGAAGCTTGCGTGTTTACGATCTGTTTTACAATTCATCTACACCGGAGAAATTTACTTACGCCCGCACGACGTAGCACCCTTTGTAGAAGCTTGCACTTTCCTACAGATACAAGGAGTCCCCTATAGCGAAGATCGGACCGTAGGGATTAGAGATTTCGGAACATTCATCAGTTCAGTTCAGGAACGGTCGATTGTTAACAATGACAGTTATGAAACTTCTGCGTATCTTGCAAGCGATTGTAAACGAGAAAACATGGAGCGACTCAGTGCAGCGGAGATAGATGGACGGCCCGAGCCATTAGCAGTACAAAACGCATCCGTTCTATTCTTCGGTCAGGAAGCGTGCTTATGCGAGCAGTCGAATGATGGCAATTCTGCATTGGATTGTGAGATGGAAAATGAAAACAGTAATGCAGCGGTTCAGCAGCTGTTAGGAGATGGAATAGAAAGATTGCAGTGTCCAGTAGCTAACTCTGCAAATGATATTCCAAGGATGGATGTAGAAAAACACCAAAGTTCAACAATTTACTCATCAAACGATCGCTTGGACGAGGATTTGAAACTGGAACGAGCAGAACATATGGACTCCTCCAGCTATGACACTCGTCTTAATGCGGCCATCGATGCAATATTAAAGCGTGGCATTAGTTATCGTGTTGCATCGAAACAGCACAACATTTCTAAGACCGTGCTGTGGCGAAGAACGATGAAAATGGCACGATTCGTCCGACCGACTTCACCGAAACTAGCCAAACAGCGAAGGGAGGCTATCGATGCGCTTAAATCCGGTGAAAAGTTAGTCCATGTAAGCCAGCGTTTCGAGGTTCCACTGTCGACGCTTCATCGGGACAAGATACGGCTGTACCAGAAGGGTATACTGCCGAGCAAGGTGATATTGAAACAGCGTGATAAGGGTGAATCTTTCCAGCAACGGTTGACGGAGGCGGTGGCGGAATGCATTGCAGGACGCATGTCTCTCTCGGAAGCAGCACGAGTGTACGAGTTACCGAAAACCTCTATATGGAGAAAGGTACGATCGTCACGGGCGAACAGTAGCAGCACAGTTGTAACAGAAGTAGAAAGAAACCTAACGAAACGTGATCACGGTGTTCAGAATTTGAAACATTGCGCTGAAACGGTTGAAGAAGATGCTGAACCCATGGTAGGAGACTTATTGAGCGCTACATTGCACATTAGCTCAGAATACATGTCCGACCCGGGTATGGATGTTTCTGCTAGCGGACTAACTCAGGATTCAATCCTGTAG
- Protein Sequence
- MAVESCVKWTNFQEHMMCAMHEILESHQYTDCRLVVPEGELYANRAILCMASRFFEAIFDGAMNLSAIETDRLTVLIPDLKLACLRSVLQFIYTGEIYLRPHDVAPFVEACTFLQIQGVPYSEDRTVGIRDFGTFISSVQERSIVNNDSYETSAYLASDCKRENMERLSAAEIDGRPEPLAVQNASVLFFGQEACLCEQSNDGNSALDCEMENENSNAAVQQLLGDGIERLQCPVANSANDIPRMDVEKHQSSTIYSSNDRLDEDLKLERAEHMDSSSYDTRLNAAIDAILKRGISYRVASKQHNISKTVLWRRTMKMARFVRPTSPKLAKQRREAIDALKSGEKLVHVSQRFEVPLSTLHRDKIRLYQKGILPSKVILKQRDKGESFQQRLTEAVAECIAGRMSLSEAARVYELPKTSIWRKVRSSRANSSSTVVTEVERNLTKRDHGVQNLKHCAETVEEDAEPMVGDLLSATLHISSEYMSDPGMDVSASGLTQDSIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00101790;
- 90% Identity
- iTF_00101790;
- 80% Identity
- iTF_00101790;