Basic Information

Insect: Anopheles fontenillei
Gene Symbol: -
Assembly: GCA_008817895.1
Location: VTWG01002080.1:12771-14936[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.2 67 4.0 5.9 2 23 252 274 251 274 0.92

2 14 0.00023 0.013 15.6 0.4 2 21 293 312 292 313 0.94

3 14 0.00053 0.03 14.5 2.1 1 21 318 338 318 340 0.94

4 14 0.2 11 6.4 0.8 1 23 346 369 346 369 0.93

5 14 0.005 0.28 11.4 1.0 1 21 381 401 381 402 0.95

6 14 0.0057 0.32 11.3 0.7 1 23 406 429 406 429 0.96

7 14 0.0084 0.48 10.7 0.2 3 23 441 462 439 462 0.91

8 14 0.0058 0.33 11.2 0.9 1 21 479 499 479 500 0.94

9 14 1.1e-05 0.00063 19.8 0.7 1 23 507 529 507 529 0.98

10 14 5.8e-05 0.0033 17.5 2.7 1 23 535 557 535 557 0.98

11 14 1.9e-06 0.00011 22.2 0.3 2 23 565 586 564 586 0.96

12 14 7.8e-05 0.0044 17.1 1.4 1 23 592 614 592 614 0.98

13 14 1.8e-07 9.9e-06 25.5 1.2 1 23 620 642 620 642 0.98

14 14 1e-05 0.00059 19.9 1.8 1 23 651 674 651 674 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.2	67	4.0	5.9	2	23	252	274	251	274	0.92
2	14	0.00023	0.013	15.6	0.4	2	21	293	312	292	313	0.94
3	14	0.00053	0.03	14.5	2.1	1	21	318	338	318	340	0.94
4	14	0.2	11	6.4	0.8	1	23	346	369	346	369	0.93
5	14	0.005	0.28	11.4	1.0	1	21	381	401	381	402	0.95
6	14	0.0057	0.32	11.3	0.7	1	23	406	429	406	429	0.96
7	14	0.0084	0.48	10.7	0.2	3	23	441	462	439	462	0.91
8	14	0.0058	0.33	11.2	0.9	1	21	479	499	479	500	0.94
9	14	1.1e-05	0.00063	19.8	0.7	1	23	507	529	507	529	0.98
10	14	5.8e-05	0.0033	17.5	2.7	1	23	535	557	535	557	0.98
11	14	1.9e-06	0.00011	22.2	0.3	2	23	565	586	564	586	0.96
12	14	7.8e-05	0.0044	17.1	1.4	1	23	592	614	592	614	0.98
13	14	1.8e-07	9.9e-06	25.5	1.2	1	23	620	642	620	642	0.98
14	14	1e-05	0.00059	19.9	1.8	1	23	651	674	651	674	0.98

Sequence Information

Coding Sequence: ATGGACCACATCCTGATCGAGCCGGACTGCTACAAGGTGTGCCGGATCTGCATGGAAAGCTGCGAGGAcgactgtgtgtgcgtgtacgacGAGTTCGAGGACGTGCTGCTGAGCGACGTGATCCGGGAGTGTGCCCGGGTCGAGATCCGCAAGAACGATGCGCTGCCTCGCAACGCTTGCCGGAACTGTGCCGAGTATCTGATCATTGCGTACCACATCATACAGAAGTGTCGCGATTCGGACGTGACGCTGCGGTCCATCTTTAAGCACGAGCTAAACTTGCACCGCGAAGAGCGCAAACCGAACGCGTCGTCGGTGGTCGGGTTGCGTGCGGACGATATGGACCCGTCCGGCTACGAGTTCCTGCTAGCGAACGGATACGACACCATGATGCTGGATGGTGAAGGAATGCTGCTGGAGAATGCGGACTGCGACTTTACCGCACCGACCGATGAGAAGGCTGACAGCGTTCAGGAGGAAGGTTTCGCGGACACGCCtattgagcagcagcagcaaccaccaccactgtccGGCATGGAACAATCGCATCAAGAATATCAGCATTCCGAGCTAACCCCCCAACAACCGGAACTGGAGgacgagcaaaacaaaccggtACTGTCAAGCGAAGACATCGAGCTGATTCTGGAGTACGAAGAAAAGGCACTTGCAGCGCGGCGCCTGGTTACGGGTGAAACGGTTCACGAGTCGAGCGAAACCACCGAAGAGGACGGTTCGTGCAACGAGCAGAAAAAGTGTTGCGGCTGCCGGAAGCTGTTCAGCAGCGAACAAAGCTTACGGGAGCACTGCCAAACGGTCCACCTGCCGGTGGAATCGTCCGCATCGGATGGACCGGCCAGCGAGAGTAAACCGATCCGCTGCCCGGTGTGCTTTAAACGGTTCAGCTCGCGCCAGTTGCTGAAAGAGCACGAACGCTCCGTCAACCggaagtatgtgtgtgcgcagTGCGGCAAGCGTTTCATGACGCAAGCCAACCTGGACACCCACACCAAATGCCACAAGAACAAGGAAACGTACAAATGTTGCGGCTGCCGGATGGATTTCGAGCAGGAGCTGGATCTGCTCGTTCACTCGCAAAACGTGCACCGGCTGGAGCGGTCGGTCGATCCGGACAAACCGTTCGAGTGTGACACGTGCTATCGGCGCTACCCGACGCGCAAATCGCTCGCCACCCACAAACGCCAGATCCGCCAGTTCCAGTGCCCGCTGTGCGGTGCCATGTTTATGAAGCAGCTCTTCCTGCAGCTGCACCACGAGCGCGCTCACCAGCAGGAGGCGCAGGAGAAGCGCCGCCGGTGCTGTGGCGGTTGCCGCGAGGTGTTCGAGAATGCGGCCGCCCTGCGCGCCCACTCCGAGCGGGTGCACAAACCGGCCGACGGGTCGGCCGGCTCCGGCACGGACGATGGCAAACCGTTCGAGTGTAACGTGTGCCGGAAGCGGTTCGCGTCGATATTTTTCCTACTTCAGCATCAGCAGAAGGTGGCGCGCGAAAAGTGCTACCCGTGCACCGTGTGTGGCCGCACGTTTGGGCGTGCGCACGATCTGTCCAACCACGAGACGACCCACTCAAACGAGATGCCGTTTGAGTGTAGCGTTTGCAGCCGGCGGTTCAAGAACAAGCTGTACCTGAAGAACCATCTTAAGCTGCACGCGAGCAGCGCCAAGGAGCAGGTGTGCGTCGAGTGCGGCAAAGCGTTTCGCACGAAGGATCTGCTCAAGACGCACCTCATCAGCCACTCGCAGGTGCGCAAGTACGCTTGCACCGTGTGTCCGGCGACGTTCAAGCGGTTGCAGTGTTTGAAAATTCACACCCGCGTACATACGCGCGAGAAAGCGTTCGAGTGTGCGGTTTGTCGCAAGCGGTACGTGCAATCGTCGGACTTGAAGCGACACATGCGCACGCACAATCCGGGCGACGAGGGAAAACCGTTCCAGTGTGAGTACTGTTTGAGGAGGTATCCGCGCAAGGACTATCTGAAGGTGCACATTCGCAAGCAGCATCTGGAAAAGACGGCGgagcatcatcaccagcaggAAGGGATGCACGCAGCGGAAGCAGTCGGCGGCATCGGTAGCGACGATGGGAATGGATCGTTCGAACGCAACGATCCACCGAATGAGATGAGCGATTTCATGGACTGTTGA
Protein Sequence: MDHILIEPDCYKVCRICMESCEDDCVCVYDEFEDVLLSDVIRECARVEIRKNDALPRNACRNCAEYLIIAYHIIQKCRDSDVTLRSIFKHELNLHREERKPNASSVVGLRADDMDPSGYEFLLANGYDTMMLDGEGMLLENADCDFTAPTDEKADSVQEEGFADTPIEQQQQPPPLSGMEQSHQEYQHSELTPQQPELEDEQNKPVLSSEDIELILEYEEKALAARRLVTGETVHESSETTEEDGSCNEQKKCCGCRKLFSSEQSLREHCQTVHLPVESSASDGPASESKPIRCPVCFKRFSSRQLLKEHERSVNRKYVCAQCGKRFMTQANLDTHTKCHKNKETYKCCGCRMDFEQELDLLVHSQNVHRLERSVDPDKPFECDTCYRRYPTRKSLATHKRQIRQFQCPLCGAMFMKQLFLQLHHERAHQQEAQEKRRRCCGGCREVFENAAALRAHSERVHKPADGSAGSGTDDGKPFECNVCRKRFASIFFLLQHQQKVAREKCYPCTVCGRTFGRAHDLSNHETTHSNEMPFECSVCSRRFKNKLYLKNHLKLHASSAKEQVCVECGKAFRTKDLLKTHLISHSQVRKYACTVCPATFKRLQCLKIHTRVHTREKAFECAVCRKRYVQSSDLKRHMRTHNPGDEGKPFQCEYCLRRYPRKDYLKVHIRKQHLEKTAEHHHQQEGMHAAEAVGGIGSDDGNGSFERNDPPNEMSDFMDC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00095209;
90% Identity: iTF_00107131;
80% Identity: -