Basic Information

Gene Symbol
myb
Assembly
GCA_008817895.1
Location
VTWG01009742.1:17993-22680[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.7e-17 7.6e-14 51.3 1.2 1 45 20 64 20 65 0.96
2 3 2.2e-21 2.5e-18 65.6 1.1 1 46 71 117 71 117 0.98
3 3 3.7e-23 4.2e-20 71.3 0.4 1 44 123 166 123 168 0.96

Sequence Information

Coding Sequence
ATGGACACATCGGACGATGATAATTCCGAGCATTCgcagggagagaaaggatCGAGCAAATCGCGCTGGACAAAGCATGAGGATGCCGCCCTCAAACAGCTGGTAGAGCAGTACGGTGAGCGGTGGGACATCATCTCGAAGCTGCTGAAGGATCGTACCGACGTGCAGTGTCAGCAGCGCTGGACGAAGGTGGTGAATCCGGATCTTATCAAGGGACCCTGGACGAAGGagGAGGACGACAAGGTGGTCGCACTGGTTGCCAAGTATGGGCCGAAAAAGTGGACCCTGATCGCGCGGCACCTGCGCGGGCGCATCGGCAAACAGTGCCGCGAGCGGTGGCACAACCATCTCAACCCGAACATCAAAAAGTCCGCCTGGACGGACGAGGAGGACCAGCTGATCTACGAGGCGCACAAGCAGTACGGCAACCAGTGGGCCAAGATCGCCAAGCTGCTGCCCGGCCGGACGGACAATGCGATCAAAAACCACTGGAACTCGACGATGCGCCGCAAGTACGAGGGCCCGGAAGCGGCCCGCCGGCGGGTGAAGATGGTCGGTACGCCGAACCAGCCACCGAACCACCATCCCCATCCCCAGCTGCAGCACCACGactatcagcagcagcagcagcagcacccagGGGCGGGCGATGGCGACCAGAAATCGAAAGCACCGCGCTATCCGCCGAACGAAAGCTTGCAGAACATCATACGCAACAATCGCAAGAAGCCGTCGCTCGATGAGAACCAGTTCCGGGACGAGATACCGCTCGAGGAGGGTCACGTCGCGGGCAAGGTGGCCGTATCGACGGAGCAGGGCGATTTCCTCATCATTCCGCTGCCGGATCGCGAGAAGCAGTACGTGATCGAGCCGGTCTATCCGACGCGCATCAACGCGAAGCTGTTCGGGGACGGTAATGCGGCgcacaataacaataacaacaatgtAAGCGAGGGGCAGGCAGCGGCCGTGGCAGGCTATCATCCGCTGGCGATCTCGGGTCAACAGTTTCTTCCCGCCAATGTGGATCTGCACGAGCTGATCAATGCGACACGGCTGGACGATAGCGTTGCATCGGAACAGTCAATGACGGAGCGCAAGACGACGCGCAACACTACGCCGAACATTCTGCGACGGAAGCGAAAGCTTAAGGAAGATCAAGAGCTGCATGACCTTTTAACGATGCAGGCGCACTAtaccgaccagcagcagcagcagcaacagggaGCGGTTGGGAATGCAGGCGGTGGTCAGGGCAATCATGCGCACGCAGGCCAGGACGGTAATGCGCGTGGCGGTACGGACAAAATGCACCTCATGTCACCGTCCATTACCCCCATCAAGCCGTTACCGTTCTCCCCGAGCCAATTCCTGAACTCTCCCAGCCTGAACGTGTCCTTCGATCAGCTTCCCGCCAGTACGCCCGTCAAACGAGCCGCAGTTAAAAACGACACTAGTCTATTAAGCACGCCAGTTCCAGCGAAGGATGTGTCGATCAAGATGGAAGCGAAGAAGGATCAGGAGAAGgcagctgaaaatgaagaggATGGTAAAACGAAAACACCGCTAAAGGAGAGCGGCAAACCTGTGGCGATCGAACCGCGCACGCCGACACCGTTCAAGAACGCAATGGCCGAGCTGGGAAAGAGACGTTCCGAAATCTACATCCCACCGAGTCCGGCACGTATCGGCGAGGACATTGCGGAGATCATGAACCAAGAGCAGGCAAGCGAAACTTCCTCCACGCTGGCAAGTGGTAGCGACACATCGGCCGGCAACAAAACGGTCATCAGCAACAATGGCAGTGGCACGCAAACGACCGATTCGAAGGAAAACACACTTCCCTCGCGAAGCGGACAGGTGTCGCCGCGCATGAACAAGAAGGCGTCCTCTTCCTCCGTCTTTTCGCAGCAGTGGGAAAATTCGGACATGAGCTTCTTTGCCGAAACGCCGAGCAAGTCGCTTATCTCGGACTCGGGTGTGACGCTGTCGCCCTCGTTGCGCGATCCGCTGCGTGAAGcagagctcctgctcgacgGTAACGAGGGTGGCAAGGAATCATCGGCCAACAAGTCGACCGTCAAGTCACCGGTGCCCGTCGACccgaaatgggaaaagtttgcgTGCGGCAAGACGCGCGATCATATGATCGTTTCGCAGCAAGCACACAGCTGTCTGAAAAAGACATCGCTCCAGCCACGATCGTTGAATTTCTACAAGTAG
Protein Sequence
MDTSDDDNSEHSQGEKGSSKSRWTKHEDAALKQLVEQYGERWDIISKLLKDRTDVQCQQRWTKVVNPDLIKGPWTKEEDDKVVALVAKYGPKKWTLIARHLRGRIGKQCRERWHNHLNPNIKKSAWTDEEDQLIYEAHKQYGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYEGPEAARRRVKMVGTPNQPPNHHPHPQLQHHDYQQQQQQHPGAGDGDQKSKAPRYPPNESLQNIIRNNRKKPSLDENQFRDEIPLEEGHVAGKVAVSTEQGDFLIIPLPDREKQYVIEPVYPTRINAKLFGDGNAAHNNNNNNVSEGQAAAVAGYHPLAISGQQFLPANVDLHELINATRLDDSVASEQSMTERKTTRNTTPNILRRKRKLKEDQELHDLLTMQAHYTDQQQQQQQGAVGNAGGGQGNHAHAGQDGNARGGTDKMHLMSPSITPIKPLPFSPSQFLNSPSLNVSFDQLPASTPVKRAAVKNDTSLLSTPVPAKDVSIKMEAKKDQEKAAENEEDGKTKTPLKESGKPVAIEPRTPTPFKNAMAELGKRRSEIYIPPSPARIGEDIAEIMNQEQASETSSTLASGSDTSAGNKTVISNNGSGTQTTDSKENTLPSRSGQVSPRMNKKASSSSVFSQQWENSDMSFFAETPSKSLISDSGVTLSPSLRDPLREAELLLDGNEGGKESSANKSTVKSPVPVDPKWEKFACGKTRDHMIVSQQAHSCLKKTSLQPRSLNFYK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00104309;
90% Identity
iTF_00104309;
80% Identity
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