Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_008817895.1
Location
VTWG01001175.1:3933-22989[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-13 5.2e-10 38.6 0.0 1 39 578 617 578 623 0.93
2 2 1.1e-18 2e-15 55.9 0.0 1 43 1199 1242 1199 1244 0.94

Sequence Information

Coding Sequence
ATGGGGCGACTAGAACGTGTCGCTGAAGAATTGATGGGAcgcaggaaatggaaacacTATCAGGACGTCCTAACGCGACAACAGTTGAATCTGCTGGATCCCAGCACGACAAACTCCACCGAGGACGATCTATTGACCGGCACGACCGGTGttgcagccgccgccgccgccgcagcagctgctgcagccgcgGCCGCCCAGCTACACCAGGGGCAGCTGATGAACTCCGCCAGCGCTACAGCCGCTGCCACAGCCCTCGCGCTAGCTGGTGGCGGCATGATCGATCAAAAGACCAATCATCCCGCCGCCATTGTGGCCGCAGCCAACGCTGCGGCCGTGGCTTCCCTCACTACACCTGCCGCTGCCCAAGCCGCTGCCAACACAACTGCCGCGACGGCCATAGTGAGAAATGGGCACTGCCAGCAGGACGACGTAGATGTCGACCCGAAAACTGCTGCCTCCGCCAGTCCCGACAGCCCGCGGGCAGCCAACTGTCTGGCGTCGGAAAAGCTCAGCCCTTCCAATGCCAGATCTCCCCGGCACGGCAAGGACGATCGTGCCGCTTCGCCAGTATCGCGCAACTGTCATACCAATGACAACGGCACGGCGACACCGAGGACGGGAGCGACCGACGCGGAAGGAACGCCTCCCCTGTCTGCATCGCCCTCGGGCACGATCGAGCGTGATCCCGCCAGGCCCAAGTCGACCTCCGGCACCGAACAGGCAGCTCTCGTCGAGCCTAGCATACCCAACACTCCTGATCGTGGTCGCGCATCTTCCGTCGCGAGTCCGGACGTGCGGGGAGAGCAAACTGCTACCGAGCATGCCGAAAGTATGTCCATCGTGAAACAGGAACCCGTAGAGCATGTAGATCCCTCGCCCATCAAATCTGAGGAACAGAATCCAGAGGTGGCGGTCGTGCCGAAGCTGCCTATTGTTggaaccaacaacaacaacaacatcatcaacagtaacaacaacacgatCCAGCATCGCAGCAACGGGATGGCGATAGAAGACGGTTCCGCCGGCACCAAACCGCTAACAGCGGAAACACCGGCCGAGCCCGAGGCGGCTACACCGGTCGACTGGAAGCCACAGGACAAGTGTTACTTCTGCGTCGACGGCAAGCTGCTGACTGTGAATGAGACGGGTGAGCTGGTGCCGGAATCGGGCCCGGCTCCGACCGAAGCAGAGCTCCGACTTAATAGACGGgctgccgctgctgccgcacTGGCCGAGTCCGATAGCGATACGAGCGAGAGCAGCGAGCCAGAGCTGCTGGCTAGTCTTCTGAGTGCCGGTGCGGCCGGTGGAATGTCCAACAAGTCGCTGGTAGCTTTGCTGCGTGAAGCCGGCGCCTCTCAAAATCTTCCCTCGCTGCAGTCGTTCGTGGCACAGTACACCGCGGCCGCTTCGTTGCAGGGTCTTCAGCCAAATCTTGCCCAGCTCTACAACCCGCTATGGTATTCACAACTCCAGCAGCAGATGTCACCGAGCGCCGTCGAGACGGCAGCTGGGGGAGCCGCAACGGCTGCCCTCAGTCCGACAACGGCGGCCAAAATGGCGGCACAGCTCGGCGCGGTCGGAGGCACTGGGGAACAACCGCTCGATCTCAGCGCAAAGCCGGGCACTTCCGGCATGACATCATTGCTCAGCAGTATGATGGATCCGAAGCACTTGTACAAGGCGAAACCCCGCTTGTCACCGGTTGGAGGACGCAAGACCTACACCGAGGATGGGTTGCAGAATGCACTGCAGGACATACTCCGCGGACGGCTCGGTACGCGCCGGGCAGCGATGCAGTACGGCATCCCGCGCTCGACGCTACGCAACAAGGTGTACAAGATGGCGCTAGGCGGCAAGCGCGGCATGTCATCCCTGCtagaggacgacgacgataaGGATTCGCAAGACGGTGACATGAAGGATGGCGATCTGCTGGACAAACTACCCCAACAGGTGCTGGCCGACATGCTGATGAAGATGTGCGGCGGAGGAACCGAGACGCCTCGATCGCACGAGACCAACCTGACACCCACACCGCCCGCCACTGCGATACCACCCGCCCAGCATGCCACGCCCGAGCCGGCTGCGCTAGACATTGCCGGCATGAGTCTAAAACCGCACCCCAGCTCCCAATCCATTGCCGTGCCGTCGACCACGCCACGTCTAGCGGGGTCTGCTACGGCGACGCCTCCCGCAACTACGCAGCCGCCACAGTCGTCACCGCTGGTTGCCGCCGCCGCGTCCACGCTGCTCAATCCGAACCTAGTGATGCAGGTGGAGCGCATTCTGCAGGTAACGGCGACCGCGCAAGCATCGGGCGAGACACAGCAGGCCTTGGCCGAGCTGCCCGAACTCCTCCGCAAGATcatcgaccagcagcagctgctggcggATCAAATTAAAAAGGCAAGCGTGAGTGGTAGCGTACCGGCCGCTGCCACGATACAACCGTCCGTTACTGGCAGTGCCGGCGGTCCAAGTCCCACCATTCACGGACTTGCTCCGGCGGGTTCCGGTGTGCTGGGAAACGCGTCTGCACTGGACGCGGCTCTCGCGCGATCACCCTCACTCAGTGCGGCCCTCAGCGCAAACGGAGGCGCCTCACAGGCAGCCGCTGCAATTGATCCGTGCTATCTTCCGTTCCTGcaacagctgcagcaacagcagcagggcaAACTGCGAACTATGTCTGCAGGCACGCCGGACACACCCGCTTCGCTGTCCTCCCTCGAGCTGAACGACGTGGCGAACGATGACCCGCACGTCATTCTGAAGATTCCGTCCTACGGACGAGCCCCTGGCGCCTCGCCAGGAGTTCCCGGCGTCCCGGCCAGCAGCAAAAATGGAGACCTGGAACGCCATCACCTGCATCATCACAATCTGACCACCCCGTCTCCGCCGACCGCTGCCGCGGCCGCCGTGCTCAGCAGTCTGGTCGGAACGCCCGCCCGAACGCCGCATTCGTCGGGTAGCCCACAGGCCGGCCTCCTGAACAGTGCCGTAGCTGGTGGCGCTGGCATGGGGGGTGTCGCGTCGGCGCCCACCTCCTCCCAGGTGTCCTTGGCCTCGTCGCTCTCGTCCTCTTCGCCGCTGTCCTCGCTGTCGGTGGCATCGTCGGTTGCAGTACAGCAGGAACGAGCCTCGCTTGGAGGCAGTGCGCAGACCAACCACCTGTCGGTCATATCGCCGCCCTTGATGAACCTGCGCGGTGCTGCAAAGGGAGAGTCTGCCCTTTCCCCGCCCGCTTCCGGTCATGGCTCGGCCCCAGGAATGACGTCCGGTGGTAAGCCAATGCTCTCCGTGCACGATGTGATAGCGCGTAGCATCAGCAAGAACTtccaacagcatcagcaatcGGACATCATGCACAAGCAGCAGATGGAGCAAATGAAACGGCCCAGCATCTCCGTCATCAAAACGCTCGGCGATATTTCACACTTTGGCAGTGCGGCCGCGGCAGCCGCCGGGCTCGGTTCCGTCGGGAGTGCGGCtcagctggcggcggcggcggcggcggccgcagcCAACAACACCGGCACCGGAGGCAAAGGCACACGTCCGAAGCGGGGCAAGTACCGCAATTACGATCGAGACAGTCTGGTGGAGGCAGTGAAGGCAGTGCAGCGCGGTGAAATGTCGGTTCACCGAGCGGGCAGCTACTACGGCGTGCCCCACTCAACGCTCGAGTACAAGGTGAAGGAAAGGCATCTGATGCGACCGAGAAAGCGCGAACCAAAACCGCAGCCCGGACTGGACGACCACCGGCTTGGAGGTTCATCCTCCGGCAAAGGATCGTCGGACGGGGCATCGTCCTTGCGAGGCCTGGACAAGGGCAAGGGTGGTTTGGGCCTTGGCGCAGGCTCGAAAGGAGCGGCCGGGCTGGCCGGCCACTCTGGCaagaaccatcatcatctgcagCAACAGGTGCAACAGGCACAGTTTCCGAACAACTCGCCCAACGGTGCGCTCGGTGCAAAGATGCCAATGTTCGATGCTTCGGCCATGGGCTACGGAGCGTCCTTCTTTTGGCCCCACTCAACCGGCTTCAGTGGGATGCCCGGCGTTGACTATGCCCGCAGCCAACCCGCACCAGACGTGTTTAGCTCCCCGACGCTTATGCAACGCTTCCAGCAGGAAGCCACGGCCAGTGCACTGTCGCCAGCTGACTCACGACATTTTCCGGGTGGAAAGGCGAGTTCGGCCGGCGTTGGTAGCACCAATGCGAATCTGACCGCCCTGCCCAAGGGCAGCAGTGTGCGTGAGATGGCTGAACAGCTGTACGACGGCAGCGGTGCCAACGGAGGCTCCTTTCTGGATGACATTATTCGGCAAAGCCTCGACAAAAAGTCCGGCGACTTTGCTAGCCACAGTGCGCTCTTCGATCACTTGTTGAAAGGCAAGCTACGATCGACGGTCGCCGCTGCGGGCTCCGTGGGCAGTGCCGAGGATGCCAACACAGCCGCCCTGCAGACGAAAGTGGCTACTAAACGAGCGGCCACCAGTCCCCCGATAGCATTCCACCCGGAGAGCATTAAGCGCGAGCGGGCCAGCCCCGGTGCCTcgtccacctcctccaccggcagcagcagcaaccgattAGGAGTTAACCTTGGCAACGATCAGCAACATCACGGACAGAACCTATCGCAGTCTGTCACCGGTATCAGTACGCCCGAACAGCTGGCGAAAAATGTCGAGAGCCTCATGAAACTGCACGAGAATCTTTCGTCGATGTCCGCGGCGCACCTACAGCGAACCGCGATGGAAGAACTCAACGGTACACAAGGCTCGACCGCATCACGCGCATCGTTGCTCGGCCACCAATCGGACTCGGTGGATCTGCACGGCTCGGACGGCGAAACAGACACGGACTCGGTACGATCGCACACCAATCATCATGGGCACAGCTTACGCCACagtctgcagcagcagcagcagcatcaccatcaccaacgGGGACTGACGGACGACAGCTCATAG
Protein Sequence
MGRLERVAEELMGRRKWKHYQDVLTRQQLNLLDPSTTNSTEDDLLTGTTGVAAAAAAAAAAAAAAAQLHQGQLMNSASATAAATALALAGGGMIDQKTNHPAAIVAAANAAAVASLTTPAAAQAAANTTAATAIVRNGHCQQDDVDVDPKTAASASPDSPRAANCLASEKLSPSNARSPRHGKDDRAASPVSRNCHTNDNGTATPRTGATDAEGTPPLSASPSGTIERDPARPKSTSGTEQAALVEPSIPNTPDRGRASSVASPDVRGEQTATEHAESMSIVKQEPVEHVDPSPIKSEEQNPEVAVVPKLPIVGTNNNNNIINSNNNTIQHRSNGMAIEDGSAGTKPLTAETPAEPEAATPVDWKPQDKCYFCVDGKLLTVNETGELVPESGPAPTEAELRLNRRAAAAAALAESDSDTSESSEPELLASLLSAGAAGGMSNKSLVALLREAGASQNLPSLQSFVAQYTAAASLQGLQPNLAQLYNPLWYSQLQQQMSPSAVETAAGGAATAALSPTTAAKMAAQLGAVGGTGEQPLDLSAKPGTSGMTSLLSSMMDPKHLYKAKPRLSPVGGRKTYTEDGLQNALQDILRGRLGTRRAAMQYGIPRSTLRNKVYKMALGGKRGMSSLLEDDDDKDSQDGDMKDGDLLDKLPQQVLADMLMKMCGGGTETPRSHETNLTPTPPATAIPPAQHATPEPAALDIAGMSLKPHPSSQSIAVPSTTPRLAGSATATPPATTQPPQSSPLVAAAASTLLNPNLVMQVERILQVTATAQASGETQQALAELPELLRKIIDQQQLLADQIKKASVSGSVPAAATIQPSVTGSAGGPSPTIHGLAPAGSGVLGNASALDAALARSPSLSAALSANGGASQAAAAIDPCYLPFLQQLQQQQQGKLRTMSAGTPDTPASLSSLELNDVANDDPHVILKIPSYGRAPGASPGVPGVPASSKNGDLERHHLHHHNLTTPSPPTAAAAAVLSSLVGTPARTPHSSGSPQAGLLNSAVAGGAGMGGVASAPTSSQVSLASSLSSSSPLSSLSVASSVAVQQERASLGGSAQTNHLSVISPPLMNLRGAAKGESALSPPASGHGSAPGMTSGGKPMLSVHDVIARSISKNFQQHQQSDIMHKQQMEQMKRPSISVIKTLGDISHFGSAAAAAAGLGSVGSAAQLAAAAAAAAANNTGTGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPGLDDHRLGGSSSGKGSSDGASSLRGLDKGKGGLGLGAGSKGAAGLAGHSGKNHHHLQQQVQQAQFPNNSPNGALGAKMPMFDASAMGYGASFFWPHSTGFSGMPGVDYARSQPAPDVFSSPTLMQRFQQEATASALSPADSRHFPGGKASSAGVGSTNANLTALPKGSSVREMAEQLYDGSGANGGSFLDDIIRQSLDKKSGDFASHSALFDHLLKGKLRSTVAAAGSVGSAEDANTAALQTKVATKRAATSPPIAFHPESIKRERASPGASSTSSTGSSSNRLGVNLGNDQQHHGQNLSQSVTGISTPEQLAKNVESLMKLHENLSSMSAAHLQRTAMEELNGTQGSTASRASLLGHQSDSVDLHGSDGETDTDSVRSHTNHHGHSLRHSLQQQQQHHHHQRGLTDDSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00105066;
80% Identity
-