Basic Information

Gene Symbol
ONECUT2
Assembly
GCA_008817895.1
Location
VTWG01002968.1:494-4043[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-37 8e-34 115.2 0.2 3 78 407 482 405 483 0.97

Sequence Information

Coding Sequence
ATGGAGCAATGCAATAACGATCGTCCTTGTGTTATCAGTAGTGGAAACTTTTTTCCCCAGAACTCCAAGAGCAGCAGcgcgaaacagcagcagcagcagcagcaacacacacaggcaatCAGCAAGCATCTAACGCAAAAGGATGACCCGCACCTGCACAGCCCGCACCACCAGGACCAGTCGTCGCTCGGCGAGATCGAGGTGATTctggtgcagcagcacaaacaggACGCCCTATCGGTGATCATCCATCCGCAGGAGAGCATGCAGCAGATCAACATGTGCCTGGGCAGCCAGAACCCGGGCTCGGTCGACTCGATGATGTCGTCCGACTTTCAGACGCTCTCGCCGATGCACGACCGGGACTCGCCGGTCAGCCTCAACACGAACACCTCGTACGCGACGCTCACgccgctgcagccgctgcCCCCCATCTCGACCATGTCGGACAAGTTCGCGTACTCGATCGGGGGCAACATCTGCGAGGCGTTCCCGGGCATCAACAGCGGCGCGGTCGGCGTCAACATCGAGATCAACTCGTGCTACAACCTGGAGAAGCTGGGCGTCATCCACTCGCCGGGGCACGGGCTGAAGGAGCACGGGCTGAAGGAGCATCTGGCGGGCGGACCGGACAAGGACCCGACGCTACAGGACGCCGACATCAagggcggcggtggtggcggtggcgctgGCAACGGCGACCCGTGCATACTGGTGCGCGGCTCGCCCGGCCTGGACGATCGGTTCCTCGGGTCGGGGAAGGAGCTGGTGGTGCGGCACCATCCGAAGGACGACGGGGAGCAGTTTAGCGGCACAGTGCAATACCTGGAGCATCCGAACGGGTCGGACGTGGTGCTACACGGCACCGGCAACGGCACCGGCCCCGGCGGAGGTGATAGtagcggcggcggtggagggGGCgtaggcggcggcggcggcggcagcagtggcagcatcCTGACAGGCAAGGAGCACCACCAGTCGGTGTTTCTTAACAAGTCTTTCAGTTCAAAAACCAACATAAGCGACCTTAACCTGTGTAAAGAGATTGTTATCGACGACGTGTACGAGGAGTCGGAGCTGGACCACGTGAAGCTGGAGGAGAAGAAGCTGGAGGAATCGTGCAATCAACCGTTGACCAATGGCGGAGGGGGCGGGGCCGGCAAGAGCGGGTCGTGCGTGTCGCTCGGCGACGTCGGCTGCCTGAACGGGGACCTGGAGGAGATCAACACGAAGGAGCTGGCGCACCGGATCAGCTCCGAGCTGAAGCGGTACAGCATCCCGCAGGCGATCTTCGCCCAGCGGGTCCTCTGCCGGTCCCAGGGCACCCTGTCCGATCTGCTGCGGAACCCGAAACCGTGGTCGAAGCTCAAGTCGGGCCGCGAAACGTTCCGCCGGATGTACAAATGGATACAGGAGCCGGAATATCAGCGAATGTCTGCCCTCAGGCTCGCAGTTAACTCTAAGAAGCCCGAAGAGCCCGAAAACCACGTCATGATGGGACACACGAAAAAACCTCGACTAGTCTTTACAGATCTGCAGAGAAGGACCCTTCAGGCAATTTTCAAAGAAACTAAGCGGCCTTCAAAGGAGATGCAAGTTACTATCGCTCGTCAGCTGGGACTGGAGCCCACGACGGTCGGGAACTTTTTCATGAACGCACGGCGACGCTCGATGGACAAATGGAAGGACGAGTCGATGAAGGGCCGGAGCAGCAGTAGTGACAATGTTATACTAGAGCACCTGAAGGACGATTCGTCCGACGAGAACCTGGGCTACGATAGTGCGTTCGTGTCCGGCGACGGTCCGCTGGAGCACAACTATCAACAGCACGTTCTCAACTaa
Protein Sequence
MEQCNNDRPCVISSGNFFPQNSKSSSAKQQQQQQQHTQAISKHLTQKDDPHLHSPHHQDQSSLGEIEVILVQQHKQDALSVIIHPQESMQQINMCLGSQNPGSVDSMMSSDFQTLSPMHDRDSPVSLNTNTSYATLTPLQPLPPISTMSDKFAYSIGGNICEAFPGINSGAVGVNIEINSCYNLEKLGVIHSPGHGLKEHGLKEHLAGGPDKDPTLQDADIKGGGGGGGAGNGDPCILVRGSPGLDDRFLGSGKELVVRHHPKDDGEQFSGTVQYLEHPNGSDVVLHGTGNGTGPGGGDSSGGGGGGVGGGGGGSSGSILTGKEHHQSVFLNKSFSSKTNISDLNLCKEIVIDDVYEESELDHVKLEEKKLEESCNQPLTNGGGGGAGKSGSCVSLGDVGCLNGDLEEINTKELAHRISSELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMYKWIQEPEYQRMSALRLAVNSKKPEEPENHVMMGHTKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDESMKGRSSSSDNVILEHLKDDSSDENLGYDSAFVSGDGPLEHNYQQHVLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00095473;
90% Identity
iTF_00104283;
80% Identity
iTF_00100876;