Basic Information

Gene Symbol
Arid4b
Assembly
GCA_008817895.1
Location
VTWG01012216.1:1516-10092[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-28 9.9e-25 86.5 0.1 1 89 299 385 299 385 0.96

Sequence Information

Coding Sequence
ATGCAGCAAGTGGACGATCCCCCTTATTTGACTGTAGGAACGGAGGTTAGCGCCAAATACAAGGGGGCGTTCTGCGAGGCCAAGGTACGCAAGGTCGTGCGCAACATCAAATGCAAGGTCGCGTACAAACAGCAGGGCCTCGGGTCTGGCGTCGTCTCGGACGATCAGATCAAGGGCGCACTGCGGGTGGGCGCGACGGTCGAGGTGAAGCATCCGGAGCGGAAGGAGTACGTGGAGGCGACGCTGACCAAAATCCAGGACTGCTCGCAGTACACGGTGGTGTTCGATGACGGCGACATTACGACGCTCCGGCGTAGTGCGCTGTGCTTGAAGAGCGGACGGCACTTTAACGAGAGTGAAACGCTGGATCAGCTGCCGCTAACGCATCCGGAGCATTTCGGAAACCCGGTCATCGGAGGACGAAGGGGACGCAGATCGCGACACCTTCTGCCCGACGAAAGTTCCGATGAGGAAGACGAACCGACCACCCACTCGCGCTCGAACGCGAGCGACAAGGAAGAGAACATCGGGAAAGTGGTGTGCGTGGAAACGAGCgacaacaagaagaagaatccgAAAGAGAACTGGTTCCCCGGGCTGGTGGTGGCTCCCACTGCCCAGGACACGGTGCGGATTCGGGTGAAGGACGAATACTTGGTGCGCTCGTTCAAGGATGGCCGTTACTACACGGTCCCGAAGAAGGAAGCGACCGAGTTTACCCGTGACAGTGTGAACAAGTCAGAAGCGGCGGCCGTCTCGGCGGCGATTGAGTACATGGACAATGATGTACTTCCACCGCACTGGGACCGGGAGGCACTGTTCGGCACTTCCGGCAGCTGTAGCGACTCCGACCAGGAGCTGGAGACGGACAGCTCGGACGATGAGCCTACGGAGGAGAAGGATCACTTCGTAGCGCAGCTGTACAAGTTTATGGACGATCGTGGAACGCCTCTGAACAAAGCGCCATCGATCACGAACCGGGACGTCGACCTGTACCGACTGTTTCGTGCGGTGCAGAAGCTGCACGGTTACAATCGTGTTACGAGTCAAAACCAGTGGAAACAGATTGCCCTCCGGTTGGGCTTTTCGCCTGCTACGGCCAGCATCACGAATTTGGTGAAACAAGCGTACAAAAAGTTTCTGTTCTCGTTTGAAGAGTTCAACCGAAAGCTTGGCTGTACGATGGTGCCGCATCCAAAGACCAGTCGCACGAAGGGGCGCAGTCTGGTGCGTGCCAGCTCGGTCCAGTCACCGAAGCTaccggaaaaggaaaagctacTGACGGCGAAGGAGAAAGCAGCCTCGGTGGCAGCGGCTGATGCATCCGCGAAGGCAAGCAGctcctcagcagcagcagcagctgcggcAGCGGTGGCctcagcagccgcagcagctgcagctgcagcggcagcagctacGGAAGCATCCAACTCGGCGGTAGAGGAGTCGGGCAATACGAGTGAATCGAGCGCGGCAGAAAGTGCTGTACTGAGACCGAGCAGCACCAAGCGAAAAGCAGGCGGCGGCAAGGTGAAAGCACTGGTGGACAAGTtcgaagagaaagagaaggaacgCGATAAAGAGAAATCGGTTGGCAAAGGAGGAGGCGGTGAGAGCAGTGGGTCGTCCGGTGGTAgcaaaaaggaggaaagtGTAACACCCGCGTCGGCTAAGAAGGAGAAGCAGCTTGGCGGGAAAGCAAAGCCTGCTGAGACGACGGTGGTGGAGAAACGTGGCCGCAAACGGAAGGATGCTGACTCCGTGGACTCCAAGAAGGACGAACGGGAAACCACCGCAACGGGGGGCAGTGGTGCAAGTACGGGAGGTGCGGGCAGCAACGTAAAGCAGGAGAAACATCCCGCGAGCAGTAGGAAGGAAGATGGTGGTCCTCCGAATAGTGGaaatggcggtggtggtggtggaggtggtggcggaAGTAGTGGAAACGGATCCGGTCCTGGGTCAGGCGGTGGGAGGAGCATTAGTCCAGGAAGTGCAGTGTCAGGAGGAACTGTTCCCGATTTCCCGATCGAAGTAGGCGACAAGCTCAAGGTGTACTACGACGAGCAGAAGGTGACGTACGAAGCGAAGGTGATCGAGATCGCCAAACAGGAAGGAAACCCTATCTATCTGGTACACTATACTGGGTGGAACACGAGGTACGATGAATGGGTTCGCAAAGAACGTATTGCGGAGAATTTGACCAATAGCAAAACGAAGAAGGGCAAATCTTCTGGCAATACGCCGACGGCGGGCGGGCCATCGACGAAACAAGCATCGTCCTCCAATGCTGGCTCCACACTCGCTGCGGGTGATAAAACCCCGAAGATTGGCAAGCGTAGCCGTGGCAACTCGAAAGGCGAACAGAGCAGTGGTCCGGGCGGAAATTCTACGCCTCGTTCGACGACCCCCAATGTGGGGCGGAATAAATCACCCGCCACTCCGTCCAACCGAAGGCCGCTCACACGGGGCGGCTCTTCGGCAGCGACGGGCTCGTCCCTTTCCGCgtccgccgccgctgccggtcGGCGGACGTCCAACAACACGGACATTTCGTCCTCCCTGTCCGTTCCGACCGATCCGGATAACACCAGCGACACCGATTCGGACGAACCGATGCTGAAAAAatgcaccaccaacagcacctCGTCGACCACCTCGTCCAACTCGTCGATTTCCATCTCGTCGACGAGCACGAAAGTAAGTACAACGGCCGAGGCCGGTTCGTCGTCCGATGCCGCGGCCATATCGGACGAGTTTTCCAACGGAGCATCCAagggtgttggtggtggtggtgttggtgttggtgttggtgttggcggtgttggtggtggtcgtgaCTATGATCTCAATCAAATACGTTCCGAACTGAAGGGTTTCAAGGAGCTGAAGTCACCCGGTTCACCGGCCTCAGACACAACCACAACTACGACGACCACGGCCGGTGCAGCCGAGGGTGGCCCCAACTCATCGTCCTCCATCACGGACGTTCCGAAGCATCTCATACCGAAGCAAGAGCCGAATCTGCTGTCCACAACCGATGTGAAGGAGTCTGTTTCCAGCTCCAACACACCACTGGCAACGATCAAGAAAGAGCTAGCCGCTGCAGTACCGATCAAAGAGGAAGAATCGACCGTCaccgaggaggacgatgaACCGGAAAAGTCGTCCGAATCGGAAACGCTCAGTGAAGAAGATTCATCGCAGTCTTCGAACAAAGCGTTCTCTAGCTCCCCGATCACAACGATGGTCGATTCGGATACGGCCGAAACTCCGCTGGCTGCTGGGCTTGTACTGAGTCCAAAGATATCATCCTCTCCACCACCCAGCGTGGAACGCGATGATTCCTCTTCCACCGAGCCACTCATCACCGTAGCTAACAAGGCAGCGGACGCAAAGGCCGCCTCGCTGGAGAAGGCAGCTGCtgcaagcagcaaaaaggaatTGGCTGAGGGTGGAGCGGGCACCGAAAAGGCAGCCTCTGCTTCAGCGACGCCCGGCAAACCTCCAGTCAAGACGTACGGTACAGCTGCAACGATCATTGCCAATTCGGAAAAGATGGCATTTTGTACAGTGCGCGACGCGAGCTCGGATAATGAGCTGATAATACAACCGAACGCGGCGACACCGAAAGAATCCGTGCAGGAATCGCCTCAGAAAAATCTTCCACACCCAACCCCTCAAACGGTGGGGATGTCTCCTTCCCTACCAGCGCGTACGAAAACGGGACAAAAGGAGGAGGATAAACCAGCTGTTGGTGCAGTTATGACGTCTCCCTCTTCTACAGCCAGTCGAACATCCAGCACTTCTTCACTGACACCGGTAAAAGCAAGCTTCGGAGCGTCCCCATCGGCTACGGCTAGCAATAATAGCAAAGAAGAATCAACGATTGCGTCTTCCCAAAGTGTAATCATGGCGGCCGGAATGGGTACGCGAGCAATAAAGTCACCCAAGTCATCTCCCTCGACAGCAACACAGTCGACGGCAGCGCCGGATGAAGGTAAACCTGCAACATCGACCGGCGGGCCAGCAAGCGTTCAAACGCCAACGATCACCAGTTTTGGATCGTTGCGTGGcgagaaaaagcaaagcagCTTGCAATACTCCGGCTCGGGACCGACCGGGACAGGCATGGAGAGGAAATTCATCCTTGGACGGGAAGGATCGTCAGCATTTTCGTCACCATCAAACACTGCTTCCGCACAATCTGCACTTTCCGCAGCACCGGCGACACCGAAgcatggtggtggcggtttGCTGGGTGAGAAGAAACACTTTTCCTCGTCGACGCTAACGCCGGCCCAGAACAAGCTGCTCAGCAAGGAAGCCCTATCGATCAAGTCGATCTTTGAGTCGACCGCGAACCGGATGGATGAAAAGATTTCCGACGTGTATGAGTTTGAGGACGAGTACGACGATCAGGATACGGGAAGCGGTGCACTTGGTGGTGTGGGAAGTGCCAGCGGGACCGCCGGCGGCGGAGCAACAGTTCCACGAAAGCTCGTATCGGACGTTCCACCTGCCGAGGTTGTCAGCTCACTGTCGCTAACACCGTCCTCTGCATCTGCCACCGCGACGgacgaaaagaggaagaaaccATTGCAACGTAAATCGATGGCAGCTTCGTCGCTGCCGGATCCATTGGACACGACCGGCTTCGGAACGGGTGGCTACAGTCCGGCCACAAAGCGAGCAAAGAAACCGTCACCTATGAAGCCGGAACCGCCGGCAGGGTCGGAAAACAAATCACCGAAAGGGGCAGGCGGTTTGCTACGCCGCGAGacaaaggaaaaggaggataaggagcAGAAACTTCCGGTGGAGGCGGAATCCCCAGCGCCAAGTGCGGAAGTGCATCGTACAACGATATATTCGGCGGAAGCACTTAAAGAAAAATCGACCGTGAAGGTAGCAGCGACACCGACCGGTCCACCGGTTGTCACTACCTGCTCTCCAGTCGGGCTAACGACGGCCTTTGTGCAAACCCCCGTAAAGAGTGACTCAACGTTCGATGTGCTGCGGAAATCGCCCAGCTTCAATCTGGTCACGCCCGGTCCGCTGGGAGCGAAGGAAGAAACGTTTAAATCGCAGGACGAAATCGAAACCAAACCCACACCGCCGCCACTGCCAGCAACGACAACTCCTGGCATCTTTACGCCAGTTATTTCAGCCTCGTCAGCTGGCAGTGGTGGAGTGGGCGATCGGTCCATCTCTTCGGCGCTTTATCCGCACGGCAAGGGCCCGTCCACGTCGGTGCTGCTCGCGAAAGCCGGCGACGACAGTCCGAAGGAGGAGCCGACAttggaaaattgcaaaaaatactttaacGATATGAACTTTGAGTTCGACGCGCCGACCGTGAAGAAACCACCGTCCATTGCGGACAAGGTGCTGAAGGCTTTAagtcaacagcagcagcagcagcagcagcaacagcagcaacagcaagcgaTAAAATCGGAAAAGCCAGAGTTCCCGAAGTACATGTCAAGCGTGATGCATCACCACTCTCTCCCGAGCACACCGAAATCGATTATGAACAGCGGGCTGCTGTCCTCACCGGCGATGGAAAGTGGTACGCCAATGTCCTTCGCATCGGCACCACATCCAGCGATCAAGTCGGAAGCTATATGCAGCATTGGAGGCAGCATTGCCACCACCATATCGTCCTACACGTCATCGGTGGCAGTTAGCGCTCCCCCGTCGAATGCGGGATATTTGAGCAATGAGGTGCTAAGTTCGACAAAATCCCACGAAACAAGTACGACTCTCGGCATGAAGAAGGAACCGGAAGAATCGCACAATTCAATAGTAAAATCAGCGCCGATCAGTACCACCGATCCAAAGACGAGCCATCCACCGCAAACACcaccatccagcagcagcgtgagCACTACCACCCCCACCAACACTGGCGGCGGTCATAAGTTGCACACGCTTGAACAAATCCCCACATCACGCAGTAATGATCTAACTGAAACGCTTCGAAAACTGGATCCGGATCCAAGGTTCTCACACGACGATGAATCTACGGACAGTAACGATTCTGACAATCGGTTAATCATTGAGGACGCAGAATCGCAAGGTAGCGGTGACCCCGTGCCAGCTGTCCCGGCGGCACATCCTCCACCGGCAGCACTAACGAGCTCCGCTGCCACGCCCAGCACGGCAGCGGTGATAGTGCATTACGACAGCAAGCAGCCCGTGCCATCGTCGGTGATTTCGGCCAAGAAGGAGCTGTTTGAAGAGAGGCCACGGTCTACTGCtgcctcctcatcctcctcctcctcctccatcaCGCACGAAATGGCTTCCGCAGCGTCAGCAGCTGCCGTTGCCGCCGTTGCGGATAAGGAGAAGCTGATCCTGAAACAAGACCGAGCACCaaccacaacagcaaccacaaccacaataACACCGGACACGCCGTCCCAAACGAAGGAAGAACCCGTAAAACCACTGTCTGGCGTATCTGCACCTGCAACGACGGTGGAAAAGAAGACATCGAGCGGTGCAAAGCAGAGCCTACTGGAGACAATCATACAGATGAACACGCCCGGCCGTGGCATGAGCTCCGAGGAGTACTTGATGCACAAAGtacacgaacagcagcagcaatcatcGGTGCAGCGTGATGCAGAAAGTCGTAAGGACGCTGCCGCCACAGCACAGAAGCTTCACGATAGCGGTGCTGTTCCAGCATCAACGTCCGTGATAACTTCAACGGCATCGGGCGACCCGGTAGCATCCTCCACCACGCAATCTCCAAAACAGGAGCAGCACAATGCTCAATCGCAAGCCCAGGCGCCCAACAATGAATCACTCTCGTTGCTTCTCTGCGAGGAAACGATACCGGGCTCACCGGCGCCCAAGGACCAGGATCGATTGCCACCGTCCACGGTCGGGCGTAAGGTGTACGCCGAGCCACCGTTGGTTCCGACCTCAACATCTTCTTCCTCATCGTCCTTCCTTCCACcgcaaaacattcaaacggCCACCGATCTGAAACCGGTTCCGATGGATCTAGAACCACCGTCCACTGTCGACACGCCAAACAGCTCTCCAAGAGATTCCGTTAGCCAGGATGAGACGCACGATCACGAATCGTTGTCACCGGTGAAGAAACGGCGCCAGCGGAAACCGAGCGAAGAGCCAACGCTCAAACGCCGGCGAACGGTCAACACCAGCCTGGGCGGCTACGGAAGTGCAAACAATGGTTCCAACAGTGGCAGTGGTTATGGCCGTAGTCAAAGAGGTCTTACTACAAGCAATGCGACAGATAGTGAGGATAATTCCGACACTATAGCGGCATTCCATCGATCGTCCTCGTCGACGTTGATCTTTGTCGGTAGCAAAACGGGGCGTCCCTgtcagtacaattttctggTCAATTTAGATCCATCCCTGAACAGCAATCAGCGGATAGTGATAATTAAGAAAAAGATCCAGGAGCTGCGCAAAACGTACAACTCGATCAAGGCCGAGCTGGCCAGTATCGATCGAAGGCGCAAGAAGCTTCGCCGCCGGGAGCGAGAAAACAAGAAGCAAGCCAAACTGAACAGTGCCAGCGCCGGCAATAACTAA
Protein Sequence
MQQVDDPPYLTVGTEVSAKYKGAFCEAKVRKVVRNIKCKVAYKQQGLGSGVVSDDQIKGALRVGATVEVKHPERKEYVEATLTKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFGNPVIGGRRGRRSRHLLPDESSDEEDEPTTHSRSNASDKEENIGKVVCVETSDNKKKNPKENWFPGLVVAPTAQDTVRIRVKDEYLVRSFKDGRYYTVPKKEATEFTRDSVNKSEAAAVSAAIEYMDNDVLPPHWDREALFGTSGSCSDSDQELETDSSDDEPTEEKDHFVAQLYKFMDDRGTPLNKAPSITNRDVDLYRLFRAVQKLHGYNRVTSQNQWKQIALRLGFSPATASITNLVKQAYKKFLFSFEEFNRKLGCTMVPHPKTSRTKGRSLVRASSVQSPKLPEKEKLLTAKEKAASVAAADASAKASSSSAAAAAAAAVASAAAAAAAAAAAATEASNSAVEESGNTSESSAAESAVLRPSSTKRKAGGGKVKALVDKFEEKEKERDKEKSVGKGGGGESSGSSGGSKKEESVTPASAKKEKQLGGKAKPAETTVVEKRGRKRKDADSVDSKKDERETTATGGSGASTGGAGSNVKQEKHPASSRKEDGGPPNSGNGGGGGGGGGGSSGNGSGPGSGGGRSISPGSAVSGGTVPDFPIEVGDKLKVYYDEQKVTYEAKVIEIAKQEGNPIYLVHYTGWNTRYDEWVRKERIAENLTNSKTKKGKSSGNTPTAGGPSTKQASSSNAGSTLAAGDKTPKIGKRSRGNSKGEQSSGPGGNSTPRSTTPNVGRNKSPATPSNRRPLTRGGSSAATGSSLSASAAAAGRRTSNNTDISSSLSVPTDPDNTSDTDSDEPMLKKCTTNSTSSTTSSNSSISISSTSTKVSTTAEAGSSSDAAAISDEFSNGASKGVGGGGVGVGVGVGGVGGGRDYDLNQIRSELKGFKELKSPGSPASDTTTTTTTTAGAAEGGPNSSSSITDVPKHLIPKQEPNLLSTTDVKESVSSSNTPLATIKKELAAAVPIKEEESTVTEEDDEPEKSSESETLSEEDSSQSSNKAFSSSPITTMVDSDTAETPLAAGLVLSPKISSSPPPSVERDDSSSTEPLITVANKAADAKAASLEKAAAASSKKELAEGGAGTEKAASASATPGKPPVKTYGTAATIIANSEKMAFCTVRDASSDNELIIQPNAATPKESVQESPQKNLPHPTPQTVGMSPSLPARTKTGQKEEDKPAVGAVMTSPSSTASRTSSTSSLTPVKASFGASPSATASNNSKEESTIASSQSVIMAAGMGTRAIKSPKSSPSTATQSTAAPDEGKPATSTGGPASVQTPTITSFGSLRGEKKQSSLQYSGSGPTGTGMERKFILGREGSSAFSSPSNTASAQSALSAAPATPKHGGGGLLGEKKHFSSSTLTPAQNKLLSKEALSIKSIFESTANRMDEKISDVYEFEDEYDDQDTGSGALGGVGSASGTAGGGATVPRKLVSDVPPAEVVSSLSLTPSSASATATDEKRKKPLQRKSMAASSLPDPLDTTGFGTGGYSPATKRAKKPSPMKPEPPAGSENKSPKGAGGLLRRETKEKEDKEQKLPVEAESPAPSAEVHRTTIYSAEALKEKSTVKVAATPTGPPVVTTCSPVGLTTAFVQTPVKSDSTFDVLRKSPSFNLVTPGPLGAKEETFKSQDEIETKPTPPPLPATTTPGIFTPVISASSAGSGGVGDRSISSALYPHGKGPSTSVLLAKAGDDSPKEEPTLENCKKYFNDMNFEFDAPTVKKPPSIADKVLKALSQQQQQQQQQQQQQQAIKSEKPEFPKYMSSVMHHHSLPSTPKSIMNSGLLSSPAMESGTPMSFASAPHPAIKSEAICSIGGSIATTISSYTSSVAVSAPPSNAGYLSNEVLSSTKSHETSTTLGMKKEPEESHNSIVKSAPISTTDPKTSHPPQTPPSSSSVSTTTPTNTGGGHKLHTLEQIPTSRSNDLTETLRKLDPDPRFSHDDESTDSNDSDNRLIIEDAESQGSGDPVPAVPAAHPPPAALTSSAATPSTAAVIVHYDSKQPVPSSVISAKKELFEERPRSTAASSSSSSSSITHEMASAASAAAVAAVADKEKLILKQDRAPTTTATTTTITPDTPSQTKEEPVKPLSGVSAPATTVEKKTSSGAKQSLLETIIQMNTPGRGMSSEEYLMHKVHEQQQQSSVQRDAESRKDAAATAQKLHDSGAVPASTSVITSTASGDPVASSTTQSPKQEQHNAQSQAQAPNNESLSLLLCEETIPGSPAPKDQDRLPPSTVGRKVYAEPPLVPTSTSSSSSSFLPPQNIQTATDLKPVPMDLEPPSTVDTPNSSPRDSVSQDETHDHESLSPVKKRRQRKPSEEPTLKRRRTVNTSLGGYGSANNGSNSGSGYGRSQRGLTTSNATDSEDNSDTIAAFHRSSSSTLIFVGSKTGRPCQYNFLVNLDPSLNSNQRIVIIKKKIQELRKTYNSIKAELASIDRRRKKLRRRERENKKQAKLNSASAGNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00106802;
90% Identity
iTF_00093253; iTF_00106802;
80% Identity
-