Basic Information

Gene Symbol
Ubp1
Assembly
GCA_008817895.1
Location
VTWG01000876.1:6418-11540[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2 1.5e+04 -6.6 2.5 7 106 156 172 153 178 0.36
2 2 2.2e-62 1.6e-58 197.4 0.6 15 220 231 454 220 457 0.90

Sequence Information

Coding Sequence
ATGTGTGAAACGTACGGGTTCGGTGGCGACACGATGGACAAAGATTATGTCCGGAAGCGGTTAAAGTGcttcaacaacagcaacagcaatggCAACGAAATCGGCAATGGTAATAGTCTCGGCCCAAATGCGCACACCAACAAcgccaacaacaacggcaCAGCCAACAACAATGAACTAGGAAGCATGCGTTGGGCCGATGATCTTGATTTGGACCTCAGCAATGAGCTCTCCAGCAACGGATACATTAGTGATTCGCTGTTGAATTTCCCTGTGTTCAAGCAGGAACTTCCATCTCCTCCTCAGAAGGTAAGTTTTCTCAAAGGATCATTCGGAAGCATGCGTTGGGCCGATGATCTTGATTTGGACCTCAGCAATGAGCTCTCCAGCAACGGATACATTAGTGATTCGCTGTTAAATTTCCCTGTGTTCAAGCAGGAACTTCCATCTCCTCCTCAGAAGcagcaacagcaacaacaacaacaggttgcccaacaacaatatcaccagcaacagcagggtCAAAACTCGATGAACGGGCCCGGTTTGATGAACAATGCGACTCATCAGCAAGCGGTCGGAGCGATCGGTGCCGGGCTGAGCAATCTGCAGAGCTTTCTGCAGAGCAACCGGCTGGACACTGATCCGAGTGGAGGCATTTTGCAGATGCAGCAGGATGGCACGTTGACAGCGGCACGTGGTGACAAAACACATGACGATCATAATCGgttccAGTACGTGCTGGCGGCCGCAACCTCGATCGCGACGAAGAACAATGAAGAATCTCTCACCTACCTTAACCAGGGCCAGAGCTACGAGATCAAGCTGAAGAAGCTTGGCGATCTGTCCCCGTTCCGGGGGAAGATTCTGAAGAGTATTATCAAGATATGCTTCCACGAGCGCCGGCTGCAGTACATGGAGCGGGAGCAGATGCAGCTCTGGCAGGCGTCCCGGCCCGGCGAGCGCATCCTGGACGTGGACATCCCGCTATCGTACGGGTTGATGCAGGTGCAGCCGACCAGCAGCAACCTGCTCAACACGATCGAGGTGTTCTGGGACCCGATGAAGGAGGTCGGCGTGTACGTGAAGGTGAACTGCATTTCCACCGAATTTACGCCCAAAAAGCATGGCGGCGAGAAGGGTGTACCGTTCCGGATTCAGGTAGAAACGTACATCGACACCAACGGTGGGCTGCAcaatggtggtggcggcggcggcggtgctAATGCGGCGCCGTGCGGCGGAGTGGACGATAAGGACGGCATACGACCGCTCCATGCGGCTGCTTGCCAGATAAAGGTGTTCAAATTGAAGGGAGCCGACCGGAAGCACAAACAGGATCGGGAGAAAATACTCAAGCGTCCGGTGGCGGAGCAGGAGAAGTACCAGCGCAGCTGCGACTGCACGATACTGACCGACATTACGACCGATTCCGTCATCCAGCCGCTCGGTGGCAGCTTTAGCCCCGAACACATTAAACGTAACGTTTCGCCGCTGCTGACCGGTGGGCCCACCTCACCCGGGCAGCTGAACAAGTTCGAAAACATCATGTCGAGCGTGCtgggcggtggcggtgttgCCCCGAACGGGCTTAGCCCGGGGGTGAAACCAACCCCGACGACGACCGCAGCGACGGCGGCGATGGTTGtagcggcggccgccgccgctgtTGCCGGCGTACAGGCCAACCATCCGATCGGCATCAGCAACGTGAGCTCCACGAACGGGCTGTGCAAAGCGTCCCCGCTCGGTGGCGAGCAGCCGATCGGCGGTGTACTGTCGCCCCAGCAACCGAGCGAACTGGACGATTACGTGCCGACCATTACGAAGGAAACGAGCCCGGGCTCGCTGGCGCAGTGGCTGGCCGTGCACCGGCTGTCCGCGTACACGAAAACGTTCGCCCAATTTTCCGGCTCGGATCTATTAAGAATGTCCAAGGAGGATCTTTGCAAAATCTGTGGCCTTGCGGATGGGATTCGAATGTTCAACATTCTCCATTCAAAAGCCATCACGCCACGCCTGACGATCTACGTGAGCTTCGAAGCAAACATCTACCACGCGATCTATCTGCACTCCAACACGATCCCGGAGCTGGTGCAGAATCTGTCGAAAATTCCCGGCTTCCTGGAGGCGATCAACGCACTCAACACGCCCAACTCGTCCGACGGGGGGCTCTGGAATGGTGGGAGCACTTTCGGGGCGGCGGGCCGTTCGTCGCTTAACGCCAGTGGTGGCGTTGCCGCTTCCAGCAGTGGTGGAGCTGGcggcaatggtggtggtggtcttggtggtaaattttccacccccgGTGCCATATCACTGTCCGTGCCGTCCCCTTCGTCCCCGCCGATCTCGTCCTCGTGCGGCATTGccaagctgcagctgctgattAATGGCCCGAACGGCATCCAGGTGCTGCTGACCGAGGATGTGCTGAACAACGTGAAGGATGAGACACTGTTCCAGCTGGAGCTGAAATCGAACGGAAATATACTGATGAAAGCGGTCCACAGTGTTACGGCGGCCGGTGGCCCCGACTGCTCGATCGACGACGATGCGAACTGA
Protein Sequence
MCETYGFGGDTMDKDYVRKRLKCFNNSNSNGNEIGNGNSLGPNAHTNNANNNGTANNNELGSMRWADDLDLDLSNELSSNGYISDSLLNFPVFKQELPSPPQKVSFLKGSFGSMRWADDLDLDLSNELSSNGYISDSLLNFPVFKQELPSPPQKQQQQQQQQVAQQQYHQQQQGQNSMNGPGLMNNATHQQAVGAIGAGLSNLQSFLQSNRLDTDPSGGILQMQQDGTLTAARGDKTHDDHNRFQYVLAAATSIATKNNEESLTYLNQGQSYEIKLKKLGDLSPFRGKILKSIIKICFHERRLQYMEREQMQLWQASRPGERILDVDIPLSYGLMQVQPTSSNLLNTIEVFWDPMKEVGVYVKVNCISTEFTPKKHGGEKGVPFRIQVETYIDTNGGLHNGGGGGGGANAAPCGGVDDKDGIRPLHAAACQIKVFKLKGADRKHKQDREKILKRPVAEQEKYQRSCDCTILTDITTDSVIQPLGGSFSPEHIKRNVSPLLTGGPTSPGQLNKFENIMSSVLGGGGVAPNGLSPGVKPTPTTTAATAAMVVAAAAAAVAGVQANHPIGISNVSSTNGLCKASPLGGEQPIGGVLSPQQPSELDDYVPTITKETSPGSLAQWLAVHRLSAYTKTFAQFSGSDLLRMSKEDLCKICGLADGIRMFNILHSKAITPRLTIYVSFEANIYHAIYLHSNTIPELVQNLSKIPGFLEAINALNTPNSSDGGLWNGGSTFGAAGRSSLNASGGVAASSSGGAGGNGGGGLGGKFSTPGAISLSVPSPSSPPISSSCGIAKLQLLINGPNGIQVLLTEDVLNNVKDETLFQLELKSNGNILMKAVHSVTAAGGPDCSIDDDAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-