Basic Information

Gene Symbol
PPP2R5D
Assembly
GCA_000473445.2
Location
KI915043.1:11956851-11969183[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 4 2.4e+02 2.1 1.2 2 23 184 206 184 206 0.94
2 16 0.0015 0.087 12.9 0.2 2 21 216 235 215 236 0.95
3 16 0.51 30 4.9 2.0 1 20 243 262 243 264 0.93
4 16 0.039 2.3 8.4 0.1 3 20 393 410 392 412 0.93
5 16 0.013 0.78 9.9 2.6 1 20 419 438 419 440 0.94
6 16 0.21 12 6.1 2.9 2 23 516 538 515 538 0.93
7 16 0.6 35 4.7 0.1 1 19 551 569 551 571 0.94
8 16 0.0021 0.13 12.4 0.1 1 21 581 601 581 606 0.95
9 16 0.28 16 5.7 0.3 1 23 665 690 665 690 0.93
10 16 0.014 0.81 9.8 0.4 2 20 707 725 707 727 0.94
11 16 0.00016 0.0097 15.9 1.0 1 23 734 757 734 757 0.93
12 16 1.5e-06 9.1e-05 22.3 0.4 1 23 764 786 764 786 0.98
13 16 0.00016 0.0097 15.9 0.3 1 23 792 815 792 815 0.95
14 16 2.3e-05 0.0013 18.6 1.0 1 23 821 843 821 843 0.98
15 16 0.028 1.7 8.9 3.9 1 23 849 872 849 872 0.92
16 16 0.00019 0.011 15.7 2.0 1 23 878 900 878 900 0.98

Sequence Information

Coding Sequence
ATGCATCGATCGACTAAGCGCAAGAAGGTGTCCGATGCCAGTGAGGACATGTTGGCACGGTGCTGCATCTGCTCCAAACAACCTGCAGGCTCATTACTAGAGCTAGCAACAGTGGTTCAACAAGGAAGGGGGACAACGATTGCAGATATAGTGGAGCAGGTCGCAGGCATCAAAGTAAAACAAGTTCAGCAACGCATTTGTAGCTCCTGTTGGACTAAAATAAAAGCGGCCTTTACAATACAGAATGAAATTCGTGGCTCGGGGTGCATAGGTGAAGCCGCGGAAGAGGACACAGAAAGCGATACGCAGGAAGGCTGTACGGAGCTGGTTGTAAAGGAGGAACAAGTAGAGTATTTGATCGAATATCTCGAGTCGGATGTTGACGACATTAAACCGGAAGAGGAAAACGTTGACGAGCAATCGCACGCTGACGAGCGGCATGAGAAAGGGTCGGGAAAAGTAACACGCCAGTTTGTAATGCCCCGTCAAGCGTCGATCGTGAAGGATGTCCTGCACGAGCAGTACCGAGCGCTGGAAGTGTCTGGTGAGCGCTGCTGTGGCTGTAGCTTCGTGGGCGAAACGCGCAAGGAACTATTGCAGCACTCGGAAACAGTACACGCCGTCGAGATACAAGATTGTGGCGATTATTGTCCTATATGTTTCTACAAATTCTCCTCCGACCGGCAGCTCGAGCAACATATCCGAGAGTTTCAGCAACCTTTAATGTTCGTATGCCTGCGGTGTAATCGATTTTACAATCAACATAGTAGGCTTGTCAACCATTTTCTGCGCTGCGGCGAAAAGTTAGATGGAGAATTGAGTGAAAGTGAAATAGAATACACAGACGTGGCCGAGGGTGATGTGATTGAGCAGGAGAACGAGGGTGAGGATGATGTTGAGAGTGGCGAATATTACTTTACCGAAGAAGCTACTGCAACTGAAGACTTCGGTTCACGTAAAACATTCTCCGACCCACGGATGATGCACCGCTTTCGGAAACAATTTGAAGAAATATTTGCCAACGAAAAACTTTCCAGCGACCTGACCGAGGAGGGCCTAAATGTGCAGCAAGTCCAAATTGCAGCTCAGCAAACGTTTACCACGTTTAACGGAATGATGATCGACCACGGTAAGCTGGTCCATCTAGCCGAACAAAGCGCTCGAGATGGCCCATCGTGCGGGCAGTGTGGGGTCCGATTCCCGAATGAAATGGAGCTCGTTAAGCATCTCAGTTTCTTCACAACCAAACAGCTGTTTTTCTGCACGATTTGCGATAAATCGTTTCTTACGCACGACAGCTTACGATATCATCAGGCGCACGACGAACGACACCGTCAGCTGCTGCACGAACAATACCGTATCTTGACAACGGATACGTTCGTCGAGCTCGACCAGCACGACGTGGCGAACGAGCTGCATAAGCTGTTAGCCGAGAAGGTTACGCACCGGTCAAAGATCGTGCGAGGTATTGAGATGCCGGAGGATCGTTTTATAGTGGGCGTCGAAGAGCACAACAACTACCGGATCCTTACCGTGCAAGGAGTAAGCTGCTGTGGTTGTACCCGTCTTTTCGACACCGAGGCGGACCTTAATCGTCATTCGAAGCACGAGCACTATCAGCCGCCGGTGTCGATTGGCCGTACGTGCGGTCACCAGTGCGACATCTGCTACGCCGTTTTCGACTTTGAACGGGGGCTTACCATGCACAACGCGATAAGACGCGCTGGAAAGAAGCGCTTGTTTGTCTGCAAGCTATGCGGATTGCTTTTTGCGAAAAAGTTTGGCCTCGCGCGACACATGCAGCTGGCACCGAACCATCTGTCGCGGTTAATTGTGGATGCGGAACGCAATGGTGATGGTGATTCGGAGGCATCGGGTAGTGGCACGGTACCGACCGATGCTATCGAATCGGATCCACGCGTGCAGGAAGCGTTACAGTTGCACCGCTCGGTGGAGCAGGCAGGAGTGGAGAAGGCGGGCCATCTCGTTTGGTATCGCTGCTGTCTGCCCAAGTGTCCGGAACTGTTCACCGAAGAGGAGGCCTTACTAGAACACACACGGGAAGAGCACAATGGACGGCGTAAGGAAAACGAACAGGAACGCAAACAAAATACGAACGTCTGTCCCGGTTGCTGTAAAGCGTTCCCAACGTTGTCCAACCTCATGTGGCATCGATTTCAACGATTCGTACCGCGCAAACACGACTGCACCCAGTGTGGCAAGACGTTCGACAAGTGGCCCAAGCTGAAGATGCACATAGAGCAGGAGCACAGTGAAACGCCACCGCGCTTCGAGTGTACGGAGTGTGGAAAGGCGTTCGTGGTGCGATCGCGGCTCAAGACACACATGCAGATACACAGCGACCGGAAGGACCACGTGTGCGATGTGTGCGGCGATGCATTCGTCAACAAGGGACTGCTGAAACGCCATCGAAGGGCTCTGCACTCGACGGAGCTGCTGTTTGAGTGTAAGCTCTGTACGAAAAAGTTTGCCGTATCGGAGAAGCTCAAGATCCACCAGCGAGTACACACCGGAGAACGTCCGTACGCATGTGGCTATTGCCATCGTACCTTCATCCACTACACCGATCGTAAACGACACGAAATGGCTACACACACGGGGGAGCGTCCGCACAAGTGTGAGCTTTGCCCAGCATCGTACATACGCAAGCATGAGCTAGCGTTGCACATGCAGAAGCATGGACCGGGAGACAGCGCAAGTGTTCGGGGTGATCAAGAATACTACGAAATCGAAACGCTACCCCCGCTGAAGGATGCCGATCCGACCGAGCGCGAGGAGCTGTTCATCCAAAAGCTGCGGCAGTGCTGCGTGTTGTTCGATTTCTCCGAGCCGCTCAACGACCTGAAGTATAAGGAGATCAAGCGCTGCGCGCTGCAAGAGATTGTCGAACATCTGAGCAACCAGAGCAACGTGATTACGGAGGCAATCTATCCGGAGGCGTTTAACATGGTCGCGATCAACCTGTTCCGGACGCTGCCGCCCTCCTCCAACCCGAACGGTGCCGAGTTCGATCCGGAGGAGGACGAACCAACGCTGGAGGTGTCCTGGCCGCACCTACAGTTTGTGTACGAGCTGTTTCTGCGCTTTCTCGAATCGCCCGACTTCCAGCCGAACGTGGCGAAGCGCTACATCGACCACAGCTTCATCCTGAACCTGCTCGAGCTGTTCGATTCGGAGGATCCGCGCGAACGTGACTTCCTAAAGACGGTGCTGCACCGGGTGTACGGGAAGTTCCTGGGGCTGCGGGCGTTCATCCGCAAGCAGATCAACAACATCTTCTACAAGTTCATCTACGAGACGGAGCACCACAACGGGATCGCGGAGCTGCTGGAGATACTGGGCAGTATTATCAACGGGTTTGCTCTGCCGCTAAAGGAGGAGCACAAGCAGTTCCTGCTGAAGGTCCTGCTGCCGCTGCACAAGGTGAAGAGCCTGTCCGTGTACCACCCGCAGCTGGCGTACTGTGTGGTGCAGTTCCTCGAGAAGGACGCGAGCCTCACGCAGCCGGTCATCAAGTGTTTGCTGAAGTTTTGGCCGAAAACGCACAGCCCCAAGGAGGTGATGTTTCTGAACGAGCTGGAGGAGATACTGGACGTGATCGAGCCGGCCGAGTTTCAGAAGGTGATGGAACCGCTGTTCCGCCAGATCGCGAAGTGCGTCTCGAGCCCACACTTCCAGGTGGCGGAACGGGCGCTCTACTACTGGAACAACGACTACATCATGTCGCTGATCTCGGAGAACTCGAAGGTCATCATGCCGATCATGTTCCCGGCACTGTACAGCAACAGCAAATCGCACTGGAACAAAACGATCCACGGGCTGATCTACAACGCGATCAAGCTGTTCATGGAGATGAACCAGCTGCTGTTCGACGAATGCCACCGGAAGTACCAGGCGGAGCAGGAGACGGAGCAGGAGAAGCTGGCGCAGCGGGAAACGCTCTGGCAGCAGATGGAAGATTTGGCCGTACGGAACAGCAAGCTGACGCTGAACGACAGTGCGGCCAGTAGTGAACCGAACAGCAGCTCGTCGCCATCGCGATCGGCACTGCTTGTGCTGCGGAATTTGGATCTAGACGCTGAGGTAAAAATAGTTAACCTCTTCGCCGGTGAGCACCTGGCGGAAGAGTTCATCGCCATCAACCCGGACCACACGGTGCCGACGCTCGTCGACGAGGACTACATCCTGTGGGAATCGAAAGCGATCGTTACGTACCTTGCGGAGCAGTACCAGCCGGGATGTTCGCTGTATCCGAATGATCCGAAAAAGCGGGGTCTCATCAACCACCGACTGTACTTCGATTCCGGTACGCTGTTCGTGGCGCTGCGTGACGTGCTGATGTCCGTGTTGCGTTCGGGCGCAACCACCATCGCGCAGGACAAGAAGGACAATGTGCACAAGGCGCTGGCGAAAATGGAAGCGTTCCTGGACGGGTGCGATTGGGTGACCGGCGATGAGTGCAGCCTGGCCGATCTTTGCATGCTGGCGAACGTGGCCACACTGAAGCACATCGGTGTAGGATTCGAACCGTATCCGAACATTAGCGGGTGGTATGAACGATGCCAGGAGCTGGCCGGTTTCGACGAAAACGACGAGGGCGCCAGCTTCATCGGGAACGCCGTGACGTCGAAACTTGAGGAACCATTTTAA
Protein Sequence
MHRSTKRKKVSDASEDMLARCCICSKQPAGSLLELATVVQQGRGTTIADIVEQVAGIKVKQVQQRICSSCWTKIKAAFTIQNEIRGSGCIGEAAEEDTESDTQEGCTELVVKEEQVEYLIEYLESDVDDIKPEEENVDEQSHADERHEKGSGKVTRQFVMPRQASIVKDVLHEQYRALEVSGERCCGCSFVGETRKELLQHSETVHAVEIQDCGDYCPICFYKFSSDRQLEQHIREFQQPLMFVCLRCNRFYNQHSRLVNHFLRCGEKLDGELSESEIEYTDVAEGDVIEQENEGEDDVESGEYYFTEEATATEDFGSRKTFSDPRMMHRFRKQFEEIFANEKLSSDLTEEGLNVQQVQIAAQQTFTTFNGMMIDHGKLVHLAEQSARDGPSCGQCGVRFPNEMELVKHLSFFTTKQLFFCTICDKSFLTHDSLRYHQAHDERHRQLLHEQYRILTTDTFVELDQHDVANELHKLLAEKVTHRSKIVRGIEMPEDRFIVGVEEHNNYRILTVQGVSCCGCTRLFDTEADLNRHSKHEHYQPPVSIGRTCGHQCDICYAVFDFERGLTMHNAIRRAGKKRLFVCKLCGLLFAKKFGLARHMQLAPNHLSRLIVDAERNGDGDSEASGSGTVPTDAIESDPRVQEALQLHRSVEQAGVEKAGHLVWYRCCLPKCPELFTEEEALLEHTREEHNGRRKENEQERKQNTNVCPGCCKAFPTLSNLMWHRFQRFVPRKHDCTQCGKTFDKWPKLKMHIEQEHSETPPRFECTECGKAFVVRSRLKTHMQIHSDRKDHVCDVCGDAFVNKGLLKRHRRALHSTELLFECKLCTKKFAVSEKLKIHQRVHTGERPYACGYCHRTFIHYTDRKRHEMATHTGERPHKCELCPASYIRKHELALHMQKHGPGDSASVRGDQEYYEIETLPPLKDADPTEREELFIQKLRQCCVLFDFSEPLNDLKYKEIKRCALQEIVEHLSNQSNVITEAIYPEAFNMVAINLFRTLPPSSNPNGAEFDPEEDEPTLEVSWPHLQFVYELFLRFLESPDFQPNVAKRYIDHSFILNLLELFDSEDPRERDFLKTVLHRVYGKFLGLRAFIRKQINNIFYKFIYETEHHNGIAELLEILGSIINGFALPLKEEHKQFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDASLTQPVIKCLLKFWPKTHSPKEVMFLNELEEILDVIEPAEFQKVMEPLFRQIAKCVSSPHFQVAERALYYWNNDYIMSLISENSKVIMPIMFPALYSNSKSHWNKTIHGLIYNAIKLFMEMNQLLFDECHRKYQAEQETEQEKLAQRETLWQQMEDLAVRNSKLTLNDSAASSEPNSSSSPSRSALLVLRNLDLDAEVKIVNLFAGEHLAEEFIAINPDHTVPTLVDEDYILWESKAIVTYLAEQYQPGCSLYPNDPKKRGLINHRLYFDSGTLFVALRDVLMSVLRSGATTIAQDKKDNVHKALAKMEAFLDGCDWVTGDECSLADLCMLANVATLKHIGVGFEPYPNISGWYERCQELAGFDENDEGASFIGNAVTSKLEEPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-