Basic Information

Insect: Anopheles farauti
Gene Symbol: -
Assembly: GCA_000473445.2
Location: KI915047.1:2307882-2313862[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.54 32 4.8 0.0 2 23 4 25 3 25 0.96

2 14 0.0093 0.55 10.4 0.9 1 23 1198 1221 1198 1221 0.94

3 14 0.19 11 6.2 3.7 1 23 1355 1377 1355 1377 0.97

4 14 0.00043 0.025 14.6 1.1 2 23 1380 1401 1379 1401 0.97

5 14 0.00022 0.013 15.5 1.4 1 23 1407 1429 1407 1429 0.98

6 14 2e-05 0.0012 18.7 3.7 2 23 1436 1458 1435 1458 0.96

7 14 0.0051 0.3 11.2 0.4 1 23 1468 1490 1468 1490 0.98

8 14 8e-05 0.0047 16.9 1.8 3 23 1497 1518 1496 1518 0.96

9 14 0.02 1.2 9.3 0.6 3 23 1533 1552 1532 1552 0.97

10 14 4.2e-05 0.0025 17.7 0.9 1 20 1559 1578 1559 1581 0.92

11 14 0.00084 0.049 13.6 0.5 1 23 1589 1611 1589 1611 0.97

12 14 0.00022 0.013 15.5 6.1 1 23 1617 1639 1617 1639 0.98

13 14 3.9e-06 0.00023 21.0 3.7 1 23 1645 1667 1645 1667 0.99

14 14 0.0015 0.087 12.9 4.5 1 23 1673 1695 1673 1696 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.54	32	4.8	0.0	2	23	4	25	3	25	0.96
2	14	0.0093	0.55	10.4	0.9	1	23	1198	1221	1198	1221	0.94
3	14	0.19	11	6.2	3.7	1	23	1355	1377	1355	1377	0.97
4	14	0.00043	0.025	14.6	1.1	2	23	1380	1401	1379	1401	0.97
5	14	0.00022	0.013	15.5	1.4	1	23	1407	1429	1407	1429	0.98
6	14	2e-05	0.0012	18.7	3.7	2	23	1436	1458	1435	1458	0.96
7	14	0.0051	0.3	11.2	0.4	1	23	1468	1490	1468	1490	0.98
8	14	8e-05	0.0047	16.9	1.8	3	23	1497	1518	1496	1518	0.96
9	14	0.02	1.2	9.3	0.6	3	23	1533	1552	1532	1552	0.97
10	14	4.2e-05	0.0025	17.7	0.9	1	20	1559	1578	1559	1581	0.92
11	14	0.00084	0.049	13.6	0.5	1	23	1589	1611	1589	1611	0.97
12	14	0.00022	0.013	15.5	6.1	1	23	1617	1639	1617	1639	0.98
13	14	3.9e-06	0.00023	21.0	3.7	1	23	1645	1667	1645	1667	0.99
14	14	0.0015	0.087	12.9	4.5	1	23	1673	1695	1673	1696	0.96

Sequence Information

Coding Sequence: ATGGAGATCGAATGCCCCGTATGCACACTTTATCTTCGTTCTGGGATGAACTTAGCCGAACATCTGGACACGCATCCCAAGGAGAAAGTGATTAGTGCGTTGGTCAAGAGCTGGCTGTTGACCAAGAATGGGCCACCGAGTGAGGTCATCGAGATTGAAGGGGCGGAAGAGACACCCCCGGTGGCGACAAAGACGACGACGTCGACGACGGTGGTGCTGTCCGATTCGCCGCCAGCCAGTTCGCGGCAGATGAGCTCGAGCTACGAAGCAGCGCAATCAATCTACCTGGATGGGGCCGGTTCGGCATCCGCGCTGCTCGGAAACCCATCGACCATGTCGGCCCCGATCGTGGTGAAGACGATGAACGCGTACGGTGTGCCAGGGTTTCAACTGAATAATGTCACCTTCTTCAAGGGGCAGGTAATTCCGCAGGAGCCGATACCGGTCGCAGCTTCCACGTCGGTGACATCCATCTCTTCCGAGGAGGAATACGCGGTCGAGCTGCAGCCGGGTACGTCGAATGGTCGTGGACCTGCAACTGCCGGCTCCACCTCTGCCATCTATCCGCGCTACACGAACGAGCTTTACTCGGGGCCACCGCCACCGTACAGCCGTGCGGTGACGTCCACCGTTACCACCAACACCCACATTGCACCCGCGAGTCAACCGTCGGCAACGTTCCAGCTTTCGAAAGCGATAACCCTCAGCGAACCATTCAGCAAACCAGCTTCGAACGATGGCAGCGAAACGGGTTTGAAAGTCGAACAGAGCTTTTCCACCGTGTCGACCGGGTCCGCAACGACGTCGAATACAGCGGCGATCTCAGGCTCGCAATCATCGACCAACTTGACGCCCCCCAAAACCAACATGGTGCAGGTGCTGAGCGATGTGAAGCTGCAGAGCGACTTAAAAGACTTTCAGGACATCATTACGCACCTGAATGCGGGCAATATGGCGATCGTGGGCGATAAAACGGCGCTGATTCCGCACCAGAGCGATCAGCGCGGCAGTTCTGCCTCCGCCGGTGGCCGTTCGTTGCTCGCATTTTCCTCCCAACGGTCGTCAAGTCAGCCAGTCCAGGCATACATCGACCCTCAGCAGGAGCAGCACCTTGCGCCTGTACGGAAGTTCGAAGTGTCCGAAGTACCGTATGTATGCGCATCGGAGTGCGTAAGTTATGGCGAAACGGGCGTTGAATGGCAGGAGGATGAGGAAGAGATAGAAGAAGATGGACTGGAGGTGGGGGAAGGGGAGCAGGAGGTGGTGGTGGTGCAGGAGGCAGAGCAACAAATCGTACAGGAGCAGGAGGAGCAGCAAGAATGGCAAGAAATGAAATACACCTCAGCAGGGTGCGTGATGGAGCGTGCGGCGGTCACATCGACCAAAACTAGCGCCATGATGACGAGCGTCATTCAAAAAACTCCACAAACACCGCCCGCACCAGCAGCCGCATCTTCGCCTGACGACACGAAGATGGTGAAGATACTGCTGCCGACAACGGTCACACCGAAAGCGAACGCTATGGCGATTGGCCAGCAGTCCCAGCCACCGCAGGCGAACAATAGCACCGGTGGTAAGCAATCCCGCCACACGCTGGCGGAGGTCGTTTGTACAACGGCTGCCCAGCAACAGCAGCCGGGCGGTGAATCGGCGACGGCCGCCGTCATACAGAAGACGTCACCGATCAAGCGGGAGGTGATGCGCCAGGCGGTGGGCGAAATACGCCCGTACGAGATCGATGTCGGTGCGTATAACATCTCGTACGTTGGGGAGGCAGGTGAAACGCACTACTATCCGCTGCCGAAGAATGAGGAGGAGATCATCCTGGTGAGCGACGTTGGCAGTGGCAACAGTGTTAGCGACAGTGGTGCCCAGCTTGTCCCGGAAGAAGCCGAGCTGGGCGTGATGCGGATGCAAGCCTCCAAAATGCGCTCCGGAAGCGCCCCTCCCTACTACGAGCAGAGCGGAAAGCAGCAGAGCGGAAAGCAGCAGAGCGGAAAGCAGCAGCACGCTGAGTACACCGCCTCATCCGCCAACGAGGGCAACGTCGCACCGCCCAAGATGCTCCAAGGGCACACGGTCGCCCGCAAGCGCAGCGTCACCATGATCGACGCGGAAGACGAGGACGAGAAGGATGGGAGGCACCGCTACGCGAGCACGCAAGCGTCGAAGTTCGCGTCACATGTGCGAACGCTGCCAGTGGAAGTAACAGCGATGGATGGGATGGATCGGGACCAGCTCGAGGCTGGACCGTCCTCGTCGTCGTCGTCCGCATCCGGTGACGCCTACGTACCTCGGCGTCCGAAGATACGCATCACGTCCGCACCGGGATCGTACTGGCACGGGAAACAAACGCCTGCGCCTTCTGCCAGCGGCGAGGAAGCGGTACCGCCGGTGCCGGCGAAGGTAGAACGTGAGGAACCGGTGCCGTCGGCGGGCGAAGCGGCATGCATCTACGAGGAGGACACTTCGGGCGCTTCCTGCTCCTCGACGGCCACCTTCTTGCGCAAGCGGGGCGTTGCGATCGCGGTCGTGACTGCGAGCGCCAGTGCCACGACGGTAAACACCGTCAGCACCGCGACCACGGGTGGTGTGTCCGGAGGCGAAGGAGAAGGCACCGGTGCCTCGACCGCCCACGAGGAAACGACGGCTAAAGCGAGCGCCAGCTGCTCCCAACACTCCAACTCCTCGTCGTCGATGTACTCGTCCAACGCGACCGTCACCACATCGAGCTGCTCGAGCGCGTCGGCCGCGAGCCTGCTGATGGAGCGTGCACCGTCCACCGAGAGCCTGAACATCCGCACCGACGAGAAGATGCCGGCGAAGGGCGAAATCTCCGAGCAGGAAAGCAATGGCGACATGGATGTCACGTCCTGGAATCATCGGCTGTACGCGGTCGGCGACAACATGCCGATCTATCCGAGCTCGTACGATCTGTCCACCGCGCAGGAGTGCTGGAATCTGAGCAGCCGCACGCAGAGCATGTTTGCGGGCAACAACGTGCAGTTTTACTACACGCCGCCGGAGCAACCGCAGTTTGGTAGCGGCAACAGTGGGCAAATTCCGCTAACAAGGGTTGCATTCCAATTTTCGGCAACCTCAGCATCGTTGCACCAGCAGCAGGGAGGTCCGCACATGCAGCAGCAGCAGCACCAGCCGCTGGGACTCGCACCGGAGCACCTGCCGATGGGTGGAATCGGAATCATAGCAACGGCAGGGAAGATAGAACCGCAGCAGCAGGACCTCGCGCTGCTGGATCAGCAGCAGCATCACCAAGCGCACCAGGATCACGACATCGATACGGACACGGCCGACATGGACGAAACGACACGCAACCGTTTGATGAAGAGCACCCTCCAGAACTTGATCGTATACGAGGATGGGGCTCCCCAGCAGCAGCAGCAGCAGCAAAGCGTCCTGCCAATGTGCGAAACTAAGTACGAGGAAGCGGGCCACTCGTCGTCCGCGTCGTTCTTCGGTTTGAGCGAAAAAGTCACGCTGATGATGGCGGAGGGTGGCGGCAACGGCGGTTCGGCTGTTCAGCGAGCCCAACGCGGACCAAAGCCGTCCGGTAGCGGTGTGTCCCGCACGTACCGGTGTGCGCACTGCCCGAAAACGTTCGGTTCGATCAAGCTGCGACGCGTCCACCAGCAGGCGGTGCACGCGGACGAGATGCGCCAGATGCTGATGTCGTTTGCGGCGGCCGGTGCTTGTGGTGGTGCTAGCGAGACGGTTGAGGCGGAGGCGGGCGCACTGTCGGTGGTGGCGCATTCGTCGTCGGTAAAGCGTCTGCCGCCGGTGGTGATGAACTACGAGTGGATGCTGCAGGAGGTGCAGCGCAAGTCGATGCTGGTGAAGAGCACGTTCATGGTGATGCCGAGCACGAGCGGTGCGATGGAAGCGGTGGCCGGTACGAGCGGTACGAGCGTGATGGGTCTGTCAGCGGGCGGGGGCGAACTGGTGCCGGTGGAGCAGAAACCGGAGCTGGTGCTGGCGCGTCTCCCGGGCGCCGACGGTTCGTCGAGCGGTCCGTTCTTGGGTGCCGCCGGGCGCAATCGCAGCTACCAGTGCAGCACCTGTCGCCACCAGTTCGAGCGGTTCAACCTGTTCAACGAGCACCTGCTGGAGCATCCGGTGACGTGCGGTTCGTGCGGCCGGCAGTTCAAGCAGTGGCGCAACTTTTCGCTCCACGTGAAGCGCCACCTCGGCATCAAGGAGCACGAGTGCCGCACGTGCGGCAAGCAGTTCGTCATCAAGCAGAAGCTGATCGAGCATATGCGCGTGCACACCGGTTACGCGCCGATCAAGTGCAAGCAGTGCAACCGGTCGTTCAAGCGCTTCTCGAACCTCGCCCAGCACCGGAAGCGCAACCACCAGAATCGCACCGCCGCCAAGGAGGACTACGTGTGCCAGCAGTGCGGCGAGGTGTTCCACAGCGTCGCGAAGATGGAGTGGCACAAGGAGACGCACGAGAAGAAGCCGAAGGCGTGCCCGTACTGCCGCGAGAAGTTCATCCACCGGAACAGCCTGACGCGCCACATCCGGCTGTCGCACACCGACAAGTACGCGCAGCTGGAGGAGACGCGCACCGAGCCGTGCACGATCTGCCAGCAGCCGTACACGAAGACGAGCATGCGCCGGCACCTCGAGACGCACACGAAGGAGCGGATGGCGTACGCGTGCGGCATCTGCAACAAGCGGTTCACCACCAACTGGAACCTGAAGCAGCACAAGTGGACGCACGCGAACCCGACGCTCAAGCCGTACCAGTGCACGCACTGCCCGAGCGCGTTCGTGCGCGAGTCCGACTACGTGACGCACGTGAACGCTCACCGCTCGATCCGGCCGTACACGTGCAACCACTGCGGCTGCCAGTTCATCCGCAAGTACAACTGGCTGCGGCACACGCGCGAGCACGAGAGCAACAAGGGCTACCGGTGCGACGAGTGTGGCCGCGAGTTCCACCGCAAGTACTACCTGACCGAGCACCAGCGCATGCACACCGGCGAGCGCCCGTTCACGTGCAACATCTGCGGCAAGACGTCCGCGACCAAGACGAACCACAACAAGCACGTGCGCATCCATCACGCGCGCGATCCGCTCACGGCGGAGGGCTAA
Protein Sequence: MEIECPVCTLYLRSGMNLAEHLDTHPKEKVISALVKSWLLTKNGPPSEVIEIEGAEETPPVATKTTTSTTVVLSDSPPASSRQMSSSYEAAQSIYLDGAGSASALLGNPSTMSAPIVVKTMNAYGVPGFQLNNVTFFKGQVIPQEPIPVAASTSVTSISSEEEYAVELQPGTSNGRGPATAGSTSAIYPRYTNELYSGPPPPYSRAVTSTVTTNTHIAPASQPSATFQLSKAITLSEPFSKPASNDGSETGLKVEQSFSTVSTGSATTSNTAAISGSQSSTNLTPPKTNMVQVLSDVKLQSDLKDFQDIITHLNAGNMAIVGDKTALIPHQSDQRGSSASAGGRSLLAFSSQRSSSQPVQAYIDPQQEQHLAPVRKFEVSEVPYVCASECVSYGETGVEWQEDEEEIEEDGLEVGEGEQEVVVVQEAEQQIVQEQEEQQEWQEMKYTSAGCVMERAAVTSTKTSAMMTSVIQKTPQTPPAPAAASSPDDTKMVKILLPTTVTPKANAMAIGQQSQPPQANNSTGGKQSRHTLAEVVCTTAAQQQQPGGESATAAVIQKTSPIKREVMRQAVGEIRPYEIDVGAYNISYVGEAGETHYYPLPKNEEEIILVSDVGSGNSVSDSGAQLVPEEAELGVMRMQASKMRSGSAPPYYEQSGKQQSGKQQSGKQQHAEYTASSANEGNVAPPKMLQGHTVARKRSVTMIDAEDEDEKDGRHRYASTQASKFASHVRTLPVEVTAMDGMDRDQLEAGPSSSSSSASGDAYVPRRPKIRITSAPGSYWHGKQTPAPSASGEEAVPPVPAKVEREEPVPSAGEAACIYEEDTSGASCSSTATFLRKRGVAIAVVTASASATTVNTVSTATTGGVSGGEGEGTGASTAHEETTAKASASCSQHSNSSSSMYSSNATVTTSSCSSASAASLLMERAPSTESLNIRTDEKMPAKGEISEQESNGDMDVTSWNHRLYAVGDNMPIYPSSYDLSTAQECWNLSSRTQSMFAGNNVQFYYTPPEQPQFGSGNSGQIPLTRVAFQFSATSASLHQQQGGPHMQQQQHQPLGLAPEHLPMGGIGIIATAGKIEPQQQDLALLDQQQHHQAHQDHDIDTDTADMDETTRNRLMKSTLQNLIVYEDGAPQQQQQQQSVLPMCETKYEEAGHSSSASFFGLSEKVTLMMAEGGGNGGSAVQRAQRGPKPSGSGVSRTYRCAHCPKTFGSIKLRRVHQQAVHADEMRQMLMSFAAAGACGGASETVEAEAGALSVVAHSSSVKRLPPVVMNYEWMLQEVQRKSMLVKSTFMVMPSTSGAMEAVAGTSGTSVMGLSAGGGELVPVEQKPELVLARLPGADGSSSGPFLGAAGRNRSYQCSTCRHQFERFNLFNEHLLEHPVTCGSCGRQFKQWRNFSLHVKRHLGIKEHECRTCGKQFVIKQKLIEHMRVHTGYAPIKCKQCNRSFKRFSNLAQHRKRNHQNRTAAKEDYVCQQCGEVFHSVAKMEWHKETHEKKPKACPYCREKFIHRNSLTRHIRLSHTDKYAQLEETRTEPCTICQQPYTKTSMRRHLETHTKERMAYACGICNKRFTTNWNLKQHKWTHANPTLKPYQCTHCPSAFVRESDYVTHVNAHRSIRPYTCNHCGCQFIRKYNWLRHTREHESNKGYRCDECGREFHRKYYLTEHQRMHTGERPFTCNICGKTSATKTNHNKHVRIHHARDPLTAEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -