Afar010217.1
Basic Information
- Insect
- Anopheles farauti
- Gene Symbol
- Mblk-1
- Assembly
- GCA_000473445.2
- Location
- KI915049.1:4440287-4443840[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-14 3.5e-11 42.2 0.0 1 39 17 56 17 62 0.93 2 2 3.3e-16 5.4e-13 48.0 0.0 1 34 496 529 496 532 0.94
Sequence Information
- Coding Sequence
- ATGTGGGCAAAGCCACGCCTGTCACCGATCGGTGGACGTAAAACGTACACCGAGGACGGGCTGCAGAACGCGCTGCAGGACATACTGAGCGGCCGGCTGGGAACGCGACGGGCCGCGGTTCAGTACGGCATTCCACGTTCGACGCTGCGCAACAAAGTGTACAAGATGGCACTGGGAGGAAAGCGCGGTGTGGCGGCACTGCTCGACGACGACGACGACAAGGATTCGCAGGATGGTGACCTCAAGGATGCCGAACTGCTGGACAAGCTGCCCCAGCACGTGCTGGCCGACATGCTGATGAAGATGTACAATGTTGCAGGCGGTGCGGGTGGTGCGGGTGGAATCGGCACTCCCCGAAGCCACGAACCCGCCCTAACGCCGACACCACCTGCCACGGCTACACCACCCGCCCAGCGCGCAACACCCGAACCGGCTTCACTGGACATTGCCGGGATGAGTCTGAAGACGCATCCCCTCCCGGTACGTGCGCCGCCCGTCCCCTCGGCGACTGCGACACCGCCCGCAACGACACAGCCACCGCAATCGTCCCCACTGGTGGCGGCCGCCGCCGCATCTCCCCTGCTCGATCCGAGTCTGGTGATGCAGGTGCAACGCATCCTGCAGGTGACGGCTTCAACGCAAGCACAGACATCGACCGAAACGCAACAGGCGCTGGCCGAGTTGCACGAACTCCTCCGCAAGATCAGCGACCAGCAGCAGCTGCTGGCCGATCAGATCAAGAAGGCAAGCGCCACCGGCGGTGTGCAACCGACGGCCTCACCCTCCCTGCCCGGGCCGGTCGCACTCGGAAACTCGTCCTCCTCGACCTCCGCACTGGACGCAACCCTTGCCCGATCGCCTTCGCTCAGTGCTGCCCTCAACGCAAACGGTCCCCCTTCCCAGGCGGCCGCCCTCGATTCCAAAAACGGTGACCTCGAACGGACGCACCTGCACCACAATCTGACACCTTCGCCACCGACGGCCGCCGCGGCCGCCGTACTGAGCAGTTTCGGTGCGACGGTTCCGCCCCGTGCCGCCCATCCTTCCGCCGCCAGTCCCGGCCAAGCACTGCCCACCGTCCCCTCCGCACCCGCCTCCTCCCAGGTGTCCCTCGCATCGTCGCTATCCTCCTCGTCCCCGCTGTCCTCGCTGTCGGTCGCGTCTTCGGTCGTGCAGCAAAACGATCGCGTATCCCAACCGAACCATCTGTCGGTCATTTCCCCTCCGCTGTTGAACCTCCGGGGTGCGGGAGCTCTGAAAGCCGAGACGGCCATCTCGCCACCGGCCAGTGCGCCGTCAGCCAAATCGTCCACGCTCGGGGACATTTCCCACTTCGGTTCGGCGGCGGCAGCTGCGGCCGCCGGGCTCGCTCCGGTCGGTAGTGCGGCACAGCTGGCGGCAGCGGCGGCAGCCGCCGCCGCAGCCAACAACACCGGCACCGGTGGCAAGGGCACCCGTCCGAAGCGCGGCAAGTATCGCAACTACGATCGCGACAGTCTCGTCGAGGCGGTGAAAGCGGTCCAGCGCGGGGAGATGTCGGTGCACCGGGCGGGCAGCTACTACGGCGTGCCGCACTCGACGCTCGAGTACAAGATGCCAATGTTCGATACGAGCGCGATGGCGGCGCAGCTACCGTACGGTCCGGCCGGTTTCCTGTGGCCGCACGCGTCCGGCTTTGCCGGCATGCCCGGGATGGATTTTGCCCGCGGTGGTCAACCCACCACCGCGGACGGGCTGTTTCCCTCGCCGACGCTGATGCACCGGTTTCAGCAGGATCCCACCGGCCAAAGCCCGATGTCGCCGGGCGATGCGAGGCATCACGGGCAAACCGGCAAGCTGGCCGGTGGTGCCAGCGGCCAGGGCTCGAGTGCGGCGGCCGCCCTACCGAAGGGAAGCATCGTGCGCGAGATGGCCGAACAGCTGTACGATGGTAGCGGCACCAACGGGAGCTCCTTCCTCGACGACATCATCCGGCAAAGCTTGGACAAAAAGTCGGGCGATCTCGCCGCCGGCCACAGTGCGCTGTTTGATCATCTGCTGAAGAGCAGCCTGCGCCCGGACGCGGACGCCCTGTCGAAGTCGGCCACGAAGCGGGCGGCCCCGAGCCCACCCTCCTTCCACCCGGACAGCATCAAACGGGAGCGGGCTAGCCCGGGCGCCTCGTCCACCTCCTCCACCGGCAGCAGCAGCAACCACCACCACCACCCGCACACACACCCCCACCACCAACACCACCACCGAATGGGACACCTGGGCAGCAGCGAGCAACATCACGGGCAGCTGCTGGCGCAAAACGTCGAGAACCTTATGAAACTGCACGAGAACCTTTCGTCAATGTCCGTGGCGCACCTACAGCGGACCGCGATGGAAGAACTCAACGGTACGCAAGGTTCCGGCGGTGGTTCGGTCGGTTCGGTTCGGCGAGGCTCACTGCTCGGTGAGACCCGGACGGTCGATCTACACGGCTCCTCGGACGGGCTGACGGACGACAGCTCATAG
- Protein Sequence
- MWAKPRLSPIGGRKTYTEDGLQNALQDILSGRLGTRRAAVQYGIPRSTLRNKVYKMALGGKRGVAALLDDDDDKDSQDGDLKDAELLDKLPQHVLADMLMKMYNVAGGAGGAGGIGTPRSHEPALTPTPPATATPPAQRATPEPASLDIAGMSLKTHPLPVRAPPVPSATATPPATTQPPQSSPLVAAAAASPLLDPSLVMQVQRILQVTASTQAQTSTETQQALAELHELLRKISDQQQLLADQIKKASATGGVQPTASPSLPGPVALGNSSSSTSALDATLARSPSLSAALNANGPPSQAAALDSKNGDLERTHLHHNLTPSPPTAAAAAVLSSFGATVPPRAAHPSAASPGQALPTVPSAPASSQVSLASSLSSSSPLSSLSVASSVVQQNDRVSQPNHLSVISPPLLNLRGAGALKAETAISPPASAPSAKSSTLGDISHFGSAAAAAAAGLAPVGSAAQLAAAAAAAAAANNTGTGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKMPMFDTSAMAAQLPYGPAGFLWPHASGFAGMPGMDFARGGQPTTADGLFPSPTLMHRFQQDPTGQSPMSPGDARHHGQTGKLAGGASGQGSSAAAALPKGSIVREMAEQLYDGSGTNGSSFLDDIIRQSLDKKSGDLAAGHSALFDHLLKSSLRPDADALSKSATKRAAPSPPSFHPDSIKRERASPGASSTSSTGSSSNHHHHPHTHPHHQHHHRMGHLGSSEQHHGQLLAQNVENLMKLHENLSSMSVAHLQRTAMEELNGTQGSGGGSVGSVRRGSLLGETRTVDLHGSSDGLTDDSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -