Afar000757.1
Basic Information
- Insect
- Anopheles farauti
- Gene Symbol
- retn
- Assembly
- GCA_000473445.2
- Location
- KI915044.1:11590098-11602932[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.3e-17 9.7e-14 51.1 0.1 29 89 4 62 1 62 0.93
Sequence Information
- Coding Sequence
- ATGGCCAAATCGGTTCTGGATCTGTACGAGTTGTACAATCTGGTCATCGCGCGCGGTGGTCTCGTCGACGTGATCAACAAGAAACTGTGGCAAGAAATCATCAAAGGCCTCCATTTGCCCTCCAGCATCACAAGCGCTGCATTTACACTCAGAACACAGTACATGAAGTATCTCTATCCGTACGAGTGCGAGAAGAAGAACCTGAGCACGCCAGCCGAGCTTCAGGCGGCCATCGATGGAAACCGGCGCGAGGGTCGTCGTTCGAGCTATGGCCAGTTTGATTCGCCATCCGTTCAACGCTCGCCGATACCGCAGGGTATCTCACAGATGCCGCCCCTGTCGTTGGTGTCACACGTCACCCAACAGCAGCACCATCATCGACTGCTGCCACCGGTCGCCCAAATACCGAACATGCTGCCGGCCGAGTTTGAGCAGCGCATGCTGAACTACATCAAGATGTTCCAGCCGAAGGAGATGGGTCGTGCCCAAAGTCCGGACAAGCTGTCCGCCCTGAACGCGCTCGACATATCGCGCGTTGCGCTCTGGAACATGTACAATCCCAGCCCGAACAGTCCACCGAACTCGCTCAACACTAGCCCGGAGAACAATATGCAGAGCGCTCTCGATCTCTCGGAATCGCCGGACCACGCAATGCCGGCGATCAAACGCGAGCGGGACCACCCGGTCGACTTTAGTGATCCGCGCGACTACGGCAATGGTTTGGGACCGCCGGCCAAACGCAGCCACCACCATCACCACTCGCATCACAATCGCTCGCTGACGCCGCAGAAGCTGAACAGTTCCTCGCACGACGAAGACGACGCCCGGTCCGGCAGTACGCCGATCAACCTGCGCGAAAACGGCGCCCACGGTCGCCGTCCGACCCTGGACGATGACGGCGACGACGAGGAGGACGACATGGAGGACGAAACGACGGAAGAGGACATGCTGCGGGCCCTAACACCGGACAGTGAGTTACACCATTCGAAGAGTCACCTGTCGACGAGTGGCGTTGGCAGTGGTACGGGATTAACCGATCCCTTCAGCTCCCCGCTTGGCATTACGGGCATGCAGTTCAAGCTGATCAGTCGAGGTGATGCCAGCAAGGGCGACCAGAAGCTTGTGGTAACGATGGAATTCAACGGCGTCCAGTACGAGGGCGTCCTGTTTGCGAACCCGCTCTCGACGGCCAACCTCTCCGCACCGACGTCGACACCACCCTCCTCCTCCGTGTCGGCCACCTCGGCATCCCCGATCGGTTCGATGGTGTCGCCGATGAAATCCTCCACCAACGCCGCCTCCGCTCTCATCTCGCCTCTAGACGATCGTGACACTTCCTCCACCATGGACGTCCCGATGGCTCTGCCGCCATCGAACGGTAGCAGCTCGACACCGACAACGATCGCCGCGTGCATCCCACAGCAGCAGGATGTTGTTGCGAGTCCAGCGATCCAACAGCTCCAGAGCTCAACATCCACAGCAGCGGCAGCAGCAACAGCACCACCACCACCACCACCACCACCACCGACGAGTCCGGCAAGATCGCTTGTGTCTTAG
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQFDSPSVQRSPIPQGISQMPPLSLVSHVTQQQHHHRLLPPVAQIPNMLPAEFEQRMLNYIKMFQPKEMGRAQSPDKLSALNALDISRVALWNMYNPSPNSPPNSLNTSPENNMQSALDLSESPDHAMPAIKRERDHPVDFSDPRDYGNGLGPPAKRSHHHHHSHHNRSLTPQKLNSSSHDEDDARSGSTPINLRENGAHGRRPTLDDDGDDEEDDMEDETTEEDMLRALTPDSELHHSKSHLSTSGVGSGTGLTDPFSSPLGITGMQFKLISRGDASKGDQKLVVTMEFNGVQYEGVLFANPLSTANLSAPTSTPPSSSVSATSASPIGSMVSPMKSSTNAASALISPLDDRDTSSTMDVPMALPPSNGSSSTPTTIAACIPQQQDVVASPAIQQLQSSTSTAAAAATAPPPPPPPPPTSPARSLVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -