Aepi007678.1
Basic Information
- Insect
- Anopheles epiroticus
- Gene Symbol
- -
- Assembly
- GCA_000349105.1
- Location
- KB669615:28302-30928[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 1.6e-05 0.00097 18.9 2.7 1 23 369 391 369 391 0.97 2 9 7.2e-06 0.00044 20.0 0.5 1 23 397 419 397 419 0.98 3 9 4.8e-05 0.0029 17.4 1.2 1 23 428 450 428 450 0.97 4 9 0.87 53 4.0 0.5 1 20 456 475 456 479 0.87 5 9 3.3e-07 2e-05 24.2 1.0 1 23 517 540 517 540 0.98 6 9 0.0015 0.093 12.7 2.5 1 23 544 566 544 566 0.92 7 9 3.3e-05 0.002 17.9 1.7 1 23 572 595 572 595 0.97 8 9 6.3e-06 0.00038 20.2 0.3 1 23 642 664 642 664 0.95 9 9 0.029 1.8 8.6 0.1 1 20 673 692 673 696 0.94
Sequence Information
- Coding Sequence
- ATGAAGTGCTGTGTGTCTGGCTGTGACACAGACGATAACGTCGTCAGTTATACGTCTGTGTTTTACGTAAACTGCCCGAACGATCCAGTCACACAACAGCAATGGTTCACGCTGTTGCAGGTAAGCGACGCCGACGGCATGCGGGCGTTGTTAGAGGGCAAGGCGAAAGTATGCAGCTGCCACTTTGCGGAGGAAAGTTTCGCGCAGCATCCAGTGTACGGGTATCGGTATTTGCTGCCGTTCTCCTTACCCACTATATTCCCTCCGCAAAAGGAAATTATAGAAACGAAACCCGTAGGCATTGAGCAAGAGAAGGATCCTGCGCTGGACTGTTTTCTGGTGTATCTCGACAATTCTGCCGAACCGGCCCTTCTTGATCATGCAGCAGTAGCAGAGATGACCCATGGGACACAGATAAATTTGAATGAAAATTCCGCTTTGTTGGAGCCGAATCAAGAGGAAAAAGTGGTCGTTGAGGACGAGAATGCAACAAGCATAGAAGAACCGAGCGATGTTGCTGATGGCGATCCTGGTGATGGTGTTGACGATGAAGACTATGACGCAATTGAACAGATCGGTATTGAGTATGCGAATGGAAAGTACTACTTTCTTAGGCTGGATGATGATATTACTCCCGACATAGATCCTAATCGAGAAGGAAGCGAGAACGTTCCGCTGCAGGAAACATCGAAAAACACTATACCGAAGGCACAGCAGAACAGAAGCATACATGAAACAGATGGGCTTGTTATCGAGCCTGATGATAATGAGTATGACGATTTCCAAGGGATGGATATCAGCGACAGTGAGAATGATCGCCTTGACATTAAGCAAGTGTACCCAGAAAGCAGAGAAATGGTCGATGGAGAAGAAATTTTATCAATGGGAGACTCGGATGGCACAGCAGAGTCGGCAGAGTATAAAGCAGTATCCTTGAAGGCCGAATATCTGATGGGCAGTGAGCCGGAGAACGAGCAGAACGATAAAAAGTTCGTTCCTGGTACAATGAGTGAGGTAGACTATGGTCTGATTGAGGTACTGGATGATCAATCGGTGTGTGATGATAAAGTTCAGGTCACAGAAAAGAACAATGGCAAAGATCACTTCTTTTGTGAGTTTTGTGGGAGAGGATTCCGCTACAAAAGCTTACTGGAACGTCACCATCTGGTACACACGAAAGTGAAAAAGTTTAGCTGCGCAGTGTGTAAAAGAGGGTTTACTCAAAAGGTTAACCTAGACATACACATGCGCCAGCACACGGGTGAATCTGCACCGAAAAAGTACACCTGCCAGATCTGCGACAAGCAGTGCATCCGATTGAGCGAACTCAAAGGCCACATGACGGCTCATCTGCGCAAGTTCCCGCACGTTTGCCCGCTCTGCACGTCTCGCTACTCGGATGCGACCGGGTTTTACGACCACTTTGTGGGCGAGCACCGGCATGAGATGACGTTAGGCGAGCTGGTAGAGCTATTGTCACAGAATCAAAATACCATCATCGTCTCTGAAAAGGAAGAACCACCCAACATTCTGCGCGACGATGGCAAGTACGAGTGTACCGTGTGCGGTAAAGCATACCGGCAAGAGTCCTACCTGGAGCGGCACAAACGTAAGATGCATGTGAAAATTTTCAACTGTCCACACTGCCCGCGCAAGTTTCTGTACAAAAGCCTGCTGACCAAGCATCTACCTACCCACACGCTCGAGAAGCCGTACCAGTGTCCGCACTGTTTGCTTTCCTACACGCAGCGCGTCAACTTAAGGGTGCACCTGGAGCGAAAGCATCCGGAGCATCACCCAGTCGAGCAGTCCGCGGCTGCCGAGAACAACGGTGGCATCGATGAAAGTGTCGATTTGTTAAAATCCAATGATGGCGAGCTACTGATCGAAAAATCAAAAACAACCGACGGACGCAAGCGAACGTACGACTGTAGACTGTGTGGCAAAAGGTTTGCACGAAGCTCTTCGCTAATGCAGCACGTGGAAGCACACAAACGGGAACCGAACCCGGTCACGTACGATTGCGAGGATTGCGTAATTTCGCTGTCGACAAGAGTAGCGTTGGAAAAGCACCGGTGGCGTTTGCACGGCGAGCATCGGAACAACATGAACATGATCAGCAATCTCGGTTTGCGTAACGTTACGATTGTACGAACCGATGACGATCAGTACGTGGAGATCGACTTTTCCGACACTGTGTCGGAGGATTTAGACAACGAGTTTTAG
- Protein Sequence
- MKCCVSGCDTDDNVVSYTSVFYVNCPNDPVTQQQWFTLLQVSDADGMRALLEGKAKVCSCHFAEESFAQHPVYGYRYLLPFSLPTIFPPQKEIIETKPVGIEQEKDPALDCFLVYLDNSAEPALLDHAAVAEMTHGTQINLNENSALLEPNQEEKVVVEDENATSIEEPSDVADGDPGDGVDDEDYDAIEQIGIEYANGKYYFLRLDDDITPDIDPNREGSENVPLQETSKNTIPKAQQNRSIHETDGLVIEPDDNEYDDFQGMDISDSENDRLDIKQVYPESREMVDGEEILSMGDSDGTAESAEYKAVSLKAEYLMGSEPENEQNDKKFVPGTMSEVDYGLIEVLDDQSVCDDKVQVTEKNNGKDHFFCEFCGRGFRYKSLLERHHLVHTKVKKFSCAVCKRGFTQKVNLDIHMRQHTGESAPKKYTCQICDKQCIRLSELKGHMTAHLRKFPHVCPLCTSRYSDATGFYDHFVGEHRHEMTLGELVELLSQNQNTIIVSEKEEPPNILRDDGKYECTVCGKAYRQESYLERHKRKMHVKIFNCPHCPRKFLYKSLLTKHLPTHTLEKPYQCPHCLLSYTQRVNLRVHLERKHPEHHPVEQSAAAENNGGIDESVDLLKSNDGELLIEKSKTTDGRKRTYDCRLCGKRFARSSSLMQHVEAHKREPNPVTYDCEDCVISLSTRVALEKHRWRLHGEHRNNMNMISNLGLRNVTIVRTDDDQYVEIDFSDTVSEDLDNEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00099707;
- 90% Identity
- iTF_00099707;
- 80% Identity
- iTF_00099707;