Basic Information

Gene Symbol
ZNF219
Assembly
GCA_000349105.1
Location
KB671528:133507-139537[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 2.7e-05 0.0016 18.2 0.6 1 23 131 153 131 153 0.99
2 11 7.2e-05 0.0044 16.8 2.8 1 23 159 182 159 182 0.96
3 11 1.6e-06 9.9e-05 22.0 0.4 1 23 188 210 188 210 0.99
4 11 4.6e-06 0.00028 20.6 0.2 1 23 216 238 216 238 0.98
5 11 0.0063 0.38 10.7 3.0 1 23 244 266 244 266 0.98
6 11 7e-06 0.00043 20.0 3.1 1 20 272 291 272 295 0.95
7 11 0.022 1.3 9.0 5.5 1 23 301 321 301 321 0.97
8 11 8.5e-06 0.00052 19.7 0.1 3 23 329 349 328 349 0.98
9 11 1.2e-05 0.00073 19.3 1.1 1 23 355 377 355 377 0.99
10 11 2.6e-05 0.0016 18.2 0.7 1 23 383 406 383 406 0.97
11 11 0.012 0.73 9.8 1.2 1 20 412 431 412 432 0.92

Sequence Information

Coding Sequence
ATGAAGAAATCAACGCGCCAAACTCGAATGTCCCGGTACGTGGGTAAGCACTCGCCTAAGATCGCGACACCGGAAGAAAGCAACAATAACATCAAACCAACCAGCAAAAAACCAATCGAAACTGTCGCTACAATAGTCAGTGGTGATGACGAGATGTCGATGGTGGACCTTTCTTCTTACATTGCGGAAAAACCGATTACATACGACGAATCGTCCGTAGACGATGAGGAGGATGACAAATCGGTTGTGAAGAAGCTGGTGAACGCGAGTGACGATACGGCAGAGGGAAGAGATGGTGTAGAGTCTGGTAGCGGAACTGATGCGACATTTTCATCTACTGGTGGGTCTTCGTCATCGAAACGTGGACGAAAACGACGAGAGCGGAAATTATATCAGTGCGAGGTGTGCCAAAAGGACTTTATGGGCACGAACGATTTGCGCAAGCATTTGCGAATACATAATGATGAACGGCCGTATCCATGTCCACACTGCAAAAACCGCTTCCGACAGGCGGGATGCCTGAAAAATCACATTGCTTCACAACACGGTACGGATGAGCAATATACGTGCGATCTGTGCGGTAAGTCATTTCCGATCAAGGAACGGCTACGGTTACACATGCGCATCCATACCGGTGAAAAACCATACAGTTGTTCGCTTTGTCCAAAAACCTTCGCGCGTGGCGGACAGCTGACGCAGCATCTTGCTACTCATAATGGCGTGAAGAAGCACAAATGCGATCAATGCACCGCTGCTTTCTCCTGTGCAGCTAACCTGAAGATGCACCTTAAAAGTCATATGGATATTCGCGACTACACGTGCCATATCTGCGGACGAGGATTCTATCGACCAGATGCACTGAAAAAACATTTGCTTTGTTATCATGCTAATCTGAAGGCATTTCATTGCAATATATGCAATAAAATGTTTAAGGGACACTTGCCACAACACATGCGAACGCATATGAAGGTACGTCCTCATGGTTGTGCAGTGTGCGGTTCGGTATTCTCCCAACGATCACAGCTGATCGTGCACCAGCGAATTCATAGCGGTGAACGCCCTTATCGCTGTCAGGTTTGCTGGCAAGCATTTGCACACTCAAGTGTGCTGAAGTTGCACATCCGAAAGCATACTGGCGAAAAACCATTTGAGTGCCCACTTTGTGTATCAAGTTTCTCGCAGCTACCACATTTAAAGAAGCATATGCTATCTATCCATCAGCAGGACAAATCTTACCTTTGTCAAAAGTGCAAAGAGTTTTTCAAAACTAAGATGGACTACCAACTGCACGTTACAGCTTGCTACAAGGACCCGGCAGCTTTGAAGAATCTCGACAATATGATGGATCCAATGTACCGACCGACCGAAAACAACGGGATTGACCCACCCATGACTATCTCTCGAATGCGATTTCTAGTGGCCATTTTGCTaaaaaaaaTTTCTAACGATGATCGTTTGAAGGAGCTGGGCTTCGATAAGCGATTGATTGACAATGTACTAATTGATTCATTGAAATGTGCTGGACGCAAGGTATGCGATGACAAATCGTACGATCCACTGGAACGATTGAAGTTAAATGTGCAAGAGCTTCTCGAGTGGACAGTACCATCCAATTACATGGAAGAGTTTCGCGGAGCGAATCGCAGTACTGAAGAGTTACTTGAAGAATTAACAAACTAA
Protein Sequence
MKKSTRQTRMSRYVGKHSPKIATPEESNNNIKPTSKKPIETVATIVSGDDEMSMVDLSSYIAEKPITYDESSVDDEEDDKSVVKKLVNASDDTAEGRDGVESGSGTDATFSSTGGSSSSKRGRKRRERKLYQCEVCQKDFMGTNDLRKHLRIHNDERPYPCPHCKNRFRQAGCLKNHIASQHGTDEQYTCDLCGKSFPIKERLRLHMRIHTGEKPYSCSLCPKTFARGGQLTQHLATHNGVKKHKCDQCTAAFSCAANLKMHLKSHMDIRDYTCHICGRGFYRPDALKKHLLCYHANLKAFHCNICNKMFKGHLPQHMRTHMKVRPHGCAVCGSVFSQRSQLIVHQRIHSGERPYRCQVCWQAFAHSSVLKLHIRKHTGEKPFECPLCVSSFSQLPHLKKHMLSIHQQDKSYLCQKCKEFFKTKMDYQLHVTACYKDPAALKNLDNMMDPMYRPTENNGIDPPMTISRMRFLVAILLKKISNDDRLKELGFDKRLIDNVLIDSLKCAGRKVCDDKSYDPLERLKLNVQELLEWTVPSNYMEEFRGANRSTEELLEELTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00100454;
90% Identity
iTF_00105288;
80% Identity
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