Aepi005371.1
Basic Information
- Insect
- Anopheles epiroticus
- Gene Symbol
- -
- Assembly
- GCA_000349105.1
- Location
- KB671555:111434-119482[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.00065 0.04 13.8 1.9 1 23 273 296 273 296 0.92 2 26 0.00022 0.013 15.3 0.4 2 23 303 325 302 325 0.96 3 26 0.0019 0.11 12.4 2.9 1 23 331 354 331 354 0.95 4 26 9.3e-05 0.0057 16.5 0.5 2 23 361 382 360 382 0.96 5 26 0.024 1.5 8.9 1.2 1 23 388 410 388 410 0.92 6 26 0.0001 0.0062 16.4 0.5 1 20 415 434 415 436 0.95 7 26 0.011 0.66 10.0 0.2 1 23 683 706 683 706 0.96 8 26 0.00063 0.038 13.9 0.5 2 23 713 735 712 735 0.96 9 26 6.5e-05 0.004 17.0 2.7 2 23 742 764 741 764 0.96 10 26 0.0007 0.043 13.7 0.3 2 23 771 792 770 792 0.97 11 26 0.0015 0.094 12.6 1.8 1 23 798 820 798 820 0.96 12 26 0.00013 0.008 16.0 5.7 1 23 825 848 825 848 0.98 13 26 9 5.5e+02 0.8 0.1 3 9 1135 1141 1134 1145 0.87 14 26 0.00043 0.026 14.4 0.5 1 23 1158 1181 1158 1181 0.94 15 26 0.00022 0.013 15.3 0.4 2 23 1188 1210 1188 1210 0.95 16 26 0.002 0.12 12.3 1.5 1 23 1216 1239 1216 1239 0.96 17 26 0.00071 0.043 13.7 0.8 2 23 1246 1267 1245 1267 0.96 18 26 0.027 1.6 8.7 4.2 1 23 1273 1295 1273 1295 0.96 19 26 1.5e-06 9.1e-05 22.1 1.5 1 23 1300 1322 1300 1322 0.98 20 26 0.61 38 4.5 0.2 3 23 1553 1570 1552 1570 0.86 21 26 0.0012 0.074 13.0 0.3 1 23 1576 1599 1576 1599 0.93 22 26 0.026 1.6 8.8 2.4 2 23 1606 1628 1605 1628 0.96 23 26 0.0013 0.079 12.9 1.8 1 23 1634 1657 1634 1657 0.96 24 26 0.00051 0.031 14.1 0.5 2 23 1664 1685 1663 1685 0.95 25 26 0.3 18 5.4 2.8 1 23 1691 1713 1691 1713 0.92 26 26 2e-05 0.0012 18.6 2.3 1 23 1718 1741 1718 1741 0.97
Sequence Information
- Coding Sequence
- ATGGATAGGATGCCGCGCGAAATAAGCAAGCTCTGCCGGCTTTGCTTGAGCGAAGACGAAGGAATTCTGTTCCCCGCATCGAAGCTAATCGATTCCACGCTAACCGTTGACGATATCGAACGGTTCACCGGTGTACGGATCGAAACAAAAGATGGTGTGCCATACGCCGTGTGCATTGATTGCCATAGCCAGCTCAAGAAATTCTGCTACTATCGATCGTTCTGCTTGAGCAATGATCATCAGTTTCGGAAGTTGTTTTCGTTGACCTCTGCAGATGATTCCACGGACAAAATTGTGATTGACACTGCAGTAGATTCACCAGCCATCATCGAAACTATTAAGGAGGAAGTAATTGTTCAACAATACGATATTACCGATCCACATGGGTCTATCGATGAGGCAattcaatcaaacgaggaaaagatagcggtcattgaatcgaatgaggaaaagatagcggtgtgtgaatATGAGGAATACGATGAAAGCACAAACGACGATACCGTTGAAGAGCTGCATGAGGAAATTGAACACATTGCGGAAGATGGTTCGGACCAGGAAGAAAAACCTCACATACACAAATTAACGATCGATAGATTTGAGACAAACGATACGTTGCCAACTAAATATTGGGCTTATCAAAGGAAACAACCCAGTAATTGGGTCACAACTTCTACCATACAAAGAACAAAAGAGAGCAACACTGAAATACAGATCAGGAAAAAAGAACCACCTGCGAAGCAGCTTTGTCCGCTCTGTGGAAAGCTCATACATTCGCTGAACGATCATATGCTCTCACACACAAAAGAACCACGCTTTTCGTGCAAGCTCTGCCCAATGAAATGCAGCCGTAAATCGTACCTGAAGCTGCACATCGATGCTGTTCACATGAAAAGAGTCTTAAAGAGGTGCGAACAGTGTGACAAAGGATTCAGCTACATAGAATCGTACGAGGCTCACATGCGAGCAAAACACAACTTCGGAGAACCGTTTGAGTGCAAAATATGTAACCTAAAGTTTCGACACAAGGGTGGGCTGCGTGGACACAACAATCGGAAGCATAACGATCAAACCAACTGCTCTTGCCCAGTTTGTGGAATGAAGTTTGAAGACAAGAAAGGGTTGATTAACCACGGTCGTGTGCATTCGGACGAGAAACCGTTCGCCTGCAAGTTCTGTCCAAAGCGATTCAAAAGTCCCAACGCGCACAGAGCGCACGAGCTGATCCACCAGGGTGTTGTGTTTCCGTGCACGTTGTGTGATAAAACGTACACCTACAAATCGTTGCTCAATATGCACATTTTTCAAGACTCAAAGATTTCCTACGCAGTTTGTATAGATTGTCATAACAAGCTGCAAAAGTTTGCTGCCTATCGGAAGTGCTGCATGAACAACGACGTACGCTTTCGACGCATGTTTCCGATGATATTCTTAAAAACGGACGGCGATGAGTCAACTACGGATGAGGGCTTGAAAGTGGAAACGGAACCACAATACATCGAGACCATAGATCATAGCTACTGTGTAGAGACGTCTGAAAGTGCGCCCGAAAGGGAGGAAGGTGCACCAGTCGACCAAAAGGATCAAATCTTTTCTGAATACGAAGAGCTTGAGGAGCTGGAAGAAGCTACCGAGACAAATGAGGAGATTGAAGAAATAGTGCAAGAAGAGATTATGATACAGACAACAGAAGACATACAAATGAACCTGGAGGAAGGGAGAGAATCAGCTTTATGTGAGGAGTGGCTACCGGCGCAGGAAACGCAGGCGCATGATTTATCATTTCAGATAATGGATGGCTATGTACAGGAAGCAGAACTAAGTGAAGACACTCAAGATCCGCCCTATACAAGCGAACTAAGCGCTCAGCAAAGTGTTGAAGAAGAGAGTGAATTTGACTGGCCCGAACAAGACCAAAGTTCAAAGACAAAAAGAAGAACCATTGAAGCTAACGGGAAAACGGATAAAAAGCAGCTATGCACACTGTGCGGGAAATTCGTTAGCTATCTACCAGATCACATGCTTACGCACACGAAGGAGCAGAAGTACCCGTGTGACCGTTGTTCGTTCATATCGAGTCGGAAGGCAAATTTGATAATGCACGTGAAAAATGTACACCTGAAACGGATCGTCAAGCGATGTGAACAATGTGATCGAGGATTTAGCTACGTTGACTCGTACATCTCTCACATGCGTGCCAAACACAACCTTGGGGAACCATTACAGTGTAAATTATGCCCGAAGAAATTTCGCCACCGAAGTGGATTGAATGGTCACATAAATCGAAAGCACAACGAGGAAAGCAACGTGCAGTGTCCAGTGTGTGGTATCGTGTGTCAGGATAAAAAAGCGCTGAAGGATCACAACAGAGTACATTCGAATGAAAAGCCGTTTGTATGCCGGCACTGTCCGAAGAATTTCAAAAGCCCGTACGCACGCAGAACGCACGAGCTCATCCACCAGGGCGTTGTGTTCAAGTGTTCGGTGTGTGATAAAACGTACAAATATAAATGTCAGTTGGTGTTGCACATGaaaaaaaaGCATCCATCTGAGGAGACCCACAGGTATAGCGTATCGAAACAACCAAAAAACTCCGTTGAGTTCGTATGGTTGTTGTTTTCCCAAATGCATGATCAGCAGCAGCTCGTGGAATCGCTGCTTAACATATTGCAACTGTCAAACCTCTTCCCGCTCAGTGAAATGCTCAATCGCACTATTACTGTGGAAGCTATCGAACGATGCACAGGAGTACTGATAGCTGAGGAGAAAAGCATACCATACTCTATTTGTGAAGATTGCTACAGTAAATTGAAAATCTTTGTCCCGTTTCGTACCTTGTGCCTGTCCAACGACACTCGATTCAAAGAGCTTTTTGGAGGAGTGTTTGACAACGGTCAGCACGATGGTCAATCCGACGATGAACAATATCTACAGACAACGGAAAGCGGAGATGAGACTAAGCTAAGCATTGCTGACCATGTGGGCTACATTGCAACGTACGAGGGACAAACGGTTGAGAGCAAAATAGCTAACGTTGAATATCTCGAGCTGGACGATGAATCTTCCGTCAGCAGCAGCATAAAGTGGGTAGATGGTTCAGGTATGGAAGATGATTTAGAAACCAAAGCAGAAGGTGATGAAATGCTTCTAGAGGATTTGAGCTCCCAAAACTCTACAAACAGCTGTGATACACCACCAAAACCTAGGACGGACAGTGGAGAAGAAAATGAACGTCCAGACAAAAAGGCTCCTTCAGAAGCTGATCCGCTTGGGAAACAATGTTTACAAAGTGTGGAAACCGCCGATGCAGATTCGTATGACGAGGCTAATGACACAGAAGACTCATCGTGTGAAAGTCGTaaaaaaaGCACGTCAAATGATATAAAATCCAGAAAGCAGCTTTGTCCGGTGTGTGGCAAAATGGTGTACGACGTAGCGGACCACACCATTTGCCACACGAAAGAGCGAAAGTTTGTTTGTCCGCATTGCTCTATGGCATATGGACGAAAAACGTATTTGAAAACGCACATCGAAGCAGTCCACCTAAAGAAGGTGGTAAGATCGTGTGAGATCTGCAAACGAGACTTTACGCAAAGAACGGGCTATGAGGCACATATGCGAGCACAACACAACATAGGTAAATGGTACGAATGTAAGTTGTGCAATGTACAGTTCCGTCACCCGGGAGGTTTACGGGAGCACAACAATCGGAAGCACAATGACGGGGCCAATTGCTCGTGTCCTGTGTGTGGCATGGAGTTCCAGAGCAAAATCGGACTGAAAAACCACAGCAGAGTACATTCTTCCGTGAAGATGTTTGCCTGCAAGTACTGCTCAAAACGTTTCAAAAGTCCCAACTCACACAGGCAGCATGAACTTACACATCTCGGTGTCACCTTTCCCTGTCCCATTTGTCAAAGGACGTATCGTTACGCGCACAACCTGAATGTACATATGCAAAAACACAAAACTAAAGAAAAAATGGCGAGTGTTGTGCGAGTAATAGACAGTATTTGCCGGTTGTGTTTGTCGGAAAATGAAGCAATTCTGCTGCCCACATCGGAAGTTATCAATTCCACGCTAACCGTCGACGATATCGAGCGATGTACCGGTGTACGGGTGGAAGAAGAACATGCATCGTACGTTATTTGCGAGGTGTGTCACGATAAACTGCAAAGATTCACCGCGTACCGTTCGTTTTGTATGAGCAATGATGTGCGCTTTAAGGATCTGTTCGCAGCGATAGGTGAAAGTGAATATGACGAGATTAAACGCTCTTGCGTTGCGTTTGAGCACACTTACTTTACAAGCGAACAGTCCCATACAGGCGAACTGAATGGCTCCATGGATCCTGGCGAAGGTGTGATTGAAACTTTAGAGGAACATTTAAACTTTGAAGAGGATGTAGAATTCATCCAGCAGGAAGCTACCATTAACGAGAGACTGTCACTGTCGGAAGAAGAAATTGAATCGTCAAGTGAAGAGATAGGTAAGGTGTTCGATCTACCCGAACCGCCGAAAGCAGTTCCCGATCGTCGGTACGTTCGCAAACGTATCATCACGAACAAAACGGCTAAAGAGCACAGTACTGAAAACAAAAGACCACGACCACGACCTGCCAAAAAACGCATACAAAATAAACCGCCAAGACAGCTTTGTCCAATGTGTGGCAAGATGGTAGTACAGTTAAAGAATCACTTAGCAACGCACACGCAGGACGAAAGGTACTCCTGTGAATACTGCTCGGCAAGCTTTATCCGCAAATCGTACATAAAGCTGCACTTGGAAGCGGTACATCTGAAGAAGGTGGTCAAGTCCTGCGAAATATGTGGCATGGGATTTACGCACATATCCAGCCACGCCTCACACATGCGCTCACAGCACAACATTGGGAAATGGTACGAGTGTAAGCTGTGCAACATGCAGTTTCGCCATCCGGGAGGCTTGCGAGAGCACAACAATCGTAAACATAATGTGCACAGTAACTGCGCGTGCGAGATCTGCGGTATGCAGTTTCAGGACAAAAAATCACTAGAAATTCACGGTAGGGTGCATACGAACGAGAAACCGTTTGTGTGTCGCTTTTGTTCGAAGCGTTTCAAGAGTCCGAATGCGCACCGGACGCATGAACTAATCCATCAGGGCGTCATTTTCACGTGTTCCTATTGTGAGAAAAGCTATCGGTACAAATCATTGCTCAACATGCACGTAAAGAAGGTTCACCTAAACCAGGGGACGGACAGTGACCAGTGCTGA
- Protein Sequence
- MDRMPREISKLCRLCLSEDEGILFPASKLIDSTLTVDDIERFTGVRIETKDGVPYAVCIDCHSQLKKFCYYRSFCLSNDHQFRKLFSLTSADDSTDKIVIDTAVDSPAIIETIKEEVIVQQYDITDPHGSIDEAIQSNEEKIAVIESNEEKIAVCEYEEYDESTNDDTVEELHEEIEHIAEDGSDQEEKPHIHKLTIDRFETNDTLPTKYWAYQRKQPSNWVTTSTIQRTKESNTEIQIRKKEPPAKQLCPLCGKLIHSLNDHMLSHTKEPRFSCKLCPMKCSRKSYLKLHIDAVHMKRVLKRCEQCDKGFSYIESYEAHMRAKHNFGEPFECKICNLKFRHKGGLRGHNNRKHNDQTNCSCPVCGMKFEDKKGLINHGRVHSDEKPFACKFCPKRFKSPNAHRAHELIHQGVVFPCTLCDKTYTYKSLLNMHIFQDSKISYAVCIDCHNKLQKFAAYRKCCMNNDVRFRRMFPMIFLKTDGDESTTDEGLKVETEPQYIETIDHSYCVETSESAPEREEGAPVDQKDQIFSEYEELEELEEATETNEEIEEIVQEEIMIQTTEDIQMNLEEGRESALCEEWLPAQETQAHDLSFQIMDGYVQEAELSEDTQDPPYTSELSAQQSVEEESEFDWPEQDQSSKTKRRTIEANGKTDKKQLCTLCGKFVSYLPDHMLTHTKEQKYPCDRCSFISSRKANLIMHVKNVHLKRIVKRCEQCDRGFSYVDSYISHMRAKHNLGEPLQCKLCPKKFRHRSGLNGHINRKHNEESNVQCPVCGIVCQDKKALKDHNRVHSNEKPFVCRHCPKNFKSPYARRTHELIHQGVVFKCSVCDKTYKYKCQLVLHMKKKHPSEETHRYSVSKQPKNSVEFVWLLFSQMHDQQQLVESLLNILQLSNLFPLSEMLNRTITVEAIERCTGVLIAEEKSIPYSICEDCYSKLKIFVPFRTLCLSNDTRFKELFGGVFDNGQHDGQSDDEQYLQTTESGDETKLSIADHVGYIATYEGQTVESKIANVEYLELDDESSVSSSIKWVDGSGMEDDLETKAEGDEMLLEDLSSQNSTNSCDTPPKPRTDSGEENERPDKKAPSEADPLGKQCLQSVETADADSYDEANDTEDSSCESRKKSTSNDIKSRKQLCPVCGKMVYDVADHTICHTKERKFVCPHCSMAYGRKTYLKTHIEAVHLKKVVRSCEICKRDFTQRTGYEAHMRAQHNIGKWYECKLCNVQFRHPGGLREHNNRKHNDGANCSCPVCGMEFQSKIGLKNHSRVHSSVKMFACKYCSKRFKSPNSHRQHELTHLGVTFPCPICQRTYRYAHNLNVHMQKHKTKEKMASVVRVIDSICRLCLSENEAILLPTSEVINSTLTVDDIERCTGVRVEEEHASYVICEVCHDKLQRFTAYRSFCMSNDVRFKDLFAAIGESEYDEIKRSCVAFEHTYFTSEQSHTGELNGSMDPGEGVIETLEEHLNFEEDVEFIQQEATINERLSLSEEEIESSSEEIGKVFDLPEPPKAVPDRRYVRKRIITNKTAKEHSTENKRPRPRPAKKRIQNKPPRQLCPMCGKMVVQLKNHLATHTQDERYSCEYCSASFIRKSYIKLHLEAVHLKKVVKSCEICGMGFTHISSHASHMRSQHNIGKWYECKLCNMQFRHPGGLREHNNRKHNVHSNCACEICGMQFQDKKSLEIHGRVHTNEKPFVCRFCSKRFKSPNAHRTHELIHQGVIFTCSYCEKSYRYKSLLNMHVKKVHLNQGTDSDQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -