Aepi003557.1
Basic Information
- Insect
- Anopheles epiroticus
- Gene Symbol
- bab1
- Assembly
- GCA_000349105.1
- Location
- KB670770:223059-226242[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.5 3.7e+03 -2.9 0.0 29 36 233 240 233 247 0.80 2 3 5e-13 7.4e-10 37.8 0.0 1 45 482 526 482 526 0.95 3 3 0.02 30 3.8 0.8 4 20 656 671 655 671 0.93
Sequence Information
- Coding Sequence
- ATGGGTAGCTCCGAAGGACAAACGTACTGTCTGCGATGGAACAACCACAAATCGAACCTGGTCGAGATACTGGACGCACTGATCAAGATGGAGTGCTACGTAGACTGCACGATCTACGTGGACGATCAGGTGCAGTTCAAGGCGCACCGGGTCGTGCTGGCCGCCAACTCGCCCTACTTTCAGTCGATCCTGCAGGACGTGCCGATGGACCACTGCAGCATACTGTTCCCGGGCGTGCAGGAGTTCGAGATGCGCGCCCTGCTCGAGTACATGTACACCGGCGAGGTGAACGTGACGCAGGCCCAGATCCCGCGCATCATGAAGATAGCCGAGCAGCTGGAGGTGAAGGGACTGTACGACATGGCGGATCTGAAGGGGCGCTTCAACAAAATGGTCGACGTGGATCATCTGATGCGTGATCGCGATCCCGCCACGACACTGCTCGCCAGCAACAACAACTACAGCAGCAAGGGTTCTTCGGCGACCGGGTCGGCCTCGGCCACTGCCTCGTCTTCGTCCGCGTGGAAGGATGTGCCACCGACCAGCAGCAGTGGTAGCAGTAGTGGCGGAGGCGTTAGTGGCAGCCATTACTCGCACCATCATCAGCAGCACCAGTCCTCGCCTGTCATTTCGACCTCGACCAACATATCGATAGCACAGAGCAGCAGTTCCTCGCCTCCGTATTCGTACAAATCGCCCTACTCCAGTCTGTACTCCCGCAGTCCCGGTGCAGTCGAGCGTGATCGGGAGCGGGAAGAGCGCAGTCGCGATCGGTCCTCCTCCTTCTCGCACCCGGCCACCTCTCCCCATCGCATCCAGTCCACCTCCGGTTCGACGGCATCCTCAGTATCGGCTCAGATTGCACTACAAGCATCGCAGGTAGGCGGCAACCATCAATCGTCCACACATCAGTCAGGCAGTTCCTCGGGCGCTACTTCCGCAACCTCAGCTCAACCGTCGACGGCGGCAGCGGCCGCAGCACTGGCGGCCGGTTGGCCCGGTCTCGGCCAGACACAGCTGCACAGCATGCTCAGCTCGGCGTACGACTCCAGCACCGATATGAACCCGCTCAAGCGCAAGAAGCTGCAATCGATGTCTAGCATGCTGCGTGACACCCCGATACTGCGCAATGTGCTGGCTCAGGCGAACCCGGCTGATTCGTCGCAATCGACCGCGGGCGCACCGGCCAGTGCAGCAGCAACCGTCGCCACGATACAGACGATCCAGGGCAGCATGAAGCCCGACCCCGAGCGACCCAGCAGTCATCACTCAAATGGCAGTGGTTATAAGTCAATCAAGGAACCATCGCATTCGCCCTACGCGGACAAATCCTTCGATGATGATCTGCTGGACTCGCCGCACAACTTCAGCGGCGACGCTCGGTTGGCTTCTTATGTGCCCCATCAGCAGCAGAAGCCGGAGTGGAAGCGCTACAAGCAGTACACTCGCACGGACATCCTCAACGCAATCGAGTGCGTGCGCAAGGGTATGAGCGCACTGCAGGCATCGCGCAAGTTCGGCGTTCCCTCCCGCACACTCTACGACAAGGTGAAGAAGCTGGGCATTACCACCGGTCGGCCAATCAACCGGGCTCTTAAGCGTTCGCCCAGCTCGAGTGGAAGTCCAGCTTCCTTCCCGTACGGTTTGAGCGGTGCGAGTCACATGTTCGGTCCGGGCAGCGGTGCTCCCGGTGGACCTCATCCGGGCGATCACCATCAGCAGCTACCCTCCCAGTCGCAGCAGCAGGACGAGGAAGCTTCCGCGGCAGCAGCTGCGGCGGCCGCAGCTGCCGCCATGGCGCACCACGAGGCGGGTCGCATGATCAAGCTGGAGCACGGCAGTCACCACGGGCTGCCGCCGACGATCCCGCACCCGGCCGCCGCACTGCTCGATCCGTCCTTCCTGCAGCAAGCGTTGGAAGCGCGCGGTGGAGACATTGCCGGTCGGGAAGCGCTGCACGCGATGGCTTTCGCGGCTGCGGCCCATGCCGCCGTAAATGGTATGAGCACGTCGCCGGGTACGCACGGAACGGCCCGTTCACCCAGCCCGAGCGTTCTTATGAAGTACATGCGCTCTGTTTCGATGAGTTCGCCCGAGGACGAACGTCACCATGCGGTACAACAACAACGGGAACGCGATCTGATCGAGGCGCGCGATCGTGAGGGTCATCACCACAATGGTTCCGATCCTGGGTACGCACGGCACGACCATCCTATGGAGCAGGACTCGATCGACGAGACGGGCAGTGAGTGTGGAGAACGACCACCCAGTGCTCCCGAAGGTCCGGTCCAAGGCCCGGACGATCATGTCGAGGATCTGTCAATGGGCCCGAAGCGTGACTCTGAAGAACGAGGATCATCGGTATCGCCACCACCATCAGCACCGGCGTCCGTCGTTCGGACAACGCAACGGTCCCGATCGCCATCTCCCCAGCCGGCTCCACCCTCGCTACCGCCCCAGCAGCAGGGTGTCATCGTGCCAGCGCCCGGTAAGTTAAAGGAGGACTACAACATCTCGATCAAGCGGGAAATCATCGCCGACAGTAACGCACCCTCGGAATCGTCGTAG
- Protein Sequence
- MGSSEGQTYCLRWNNHKSNLVEILDALIKMECYVDCTIYVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQEFEMRALLEYMYTGEVNVTQAQIPRIMKIAEQLEVKGLYDMADLKGRFNKMVDVDHLMRDRDPATTLLASNNNYSSKGSSATGSASATASSSSAWKDVPPTSSSGSSSGGGVSGSHYSHHHQQHQSSPVISTSTNISIAQSSSSSPPYSYKSPYSSLYSRSPGAVERDREREERSRDRSSSFSHPATSPHRIQSTSGSTASSVSAQIALQASQVGGNHQSSTHQSGSSSGATSATSAQPSTAAAAAALAAGWPGLGQTQLHSMLSSAYDSSTDMNPLKRKKLQSMSSMLRDTPILRNVLAQANPADSSQSTAGAPASAAATVATIQTIQGSMKPDPERPSSHHSNGSGYKSIKEPSHSPYADKSFDDDLLDSPHNFSGDARLASYVPHQQQKPEWKRYKQYTRTDILNAIECVRKGMSALQASRKFGVPSRTLYDKVKKLGITTGRPINRALKRSPSSSGSPASFPYGLSGASHMFGPGSGAPGGPHPGDHHQQLPSQSQQQDEEASAAAAAAAAAAAMAHHEAGRMIKLEHGSHHGLPPTIPHPAAALLDPSFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGMSTSPGTHGTARSPSPSVLMKYMRSVSMSSPEDERHHAVQQQRERDLIEARDREGHHHNGSDPGYARHDHPMEQDSIDETGSECGERPPSAPEGPVQGPDDHVEDLSMGPKRDSEERGSSVSPPPSAPASVVRTTQRSRSPSPQPAPPSLPPQQQGVIVPAPGKLKEDYNISIKREIIADSNAPSESS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00101774;
- 90% Identity
- iTF_00099760;
- 80% Identity
- iTF_00099760;