Aepi000937.1
Basic Information
- Insect
- Anopheles epiroticus
- Gene Symbol
- ttk
- Assembly
- GCA_000349105.1
- Location
- KB670014:246507-248078[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.79 1.2e+03 -1.2 0.0 7 20 85 102 84 102 0.85 2 4 3.2e-08 4.7e-05 22.4 0.2 2 37 295 331 294 337 0.88 3 4 0.0003 0.43 9.7 0.0 23 42 365 384 350 386 0.88 4 4 7e-13 1e-09 37.3 0.0 4 38 406 440 404 443 0.94
Sequence Information
- Coding Sequence
- ATGGAGTACCCCAGCTCGTGCCTGCGGTGGCTCAACTTTAGCGAGCACATGCTGAACATCTACTACGGCATCTTCCAAACGCACGAGTACACCGATTGCCGACTGGTTGTGCCCGATGGTGAGCTGTACGCGAACCGTCCCATACTGTCCATGGCGTCCAGTTTCTTTGAGACAATATTCAGTGGTGTCGAGAACGGGCTTCTCTCTACCGGGACGGAAATGGTTACCGTTCTTTTACCGGATCTGAAGCTAGCAGCATTACGATCCGTACTGCAGTTCGTCTACACGGGCGAGGTTAGTGTGCGGCCATACGAGATGGCCCCGTTTGTAGAGGCGTGCAGTTTTCTGCAGATACGAGGAGTACGGTTTGTCGAGGATCGCATTGTGGGTGTTCGATTTGGAAAGGCCATCAGCTTGATATCGGACGAGCCGAATCCTCAACACCATGCTACGGATTCGGGCGAATGCCGTACAGCAGAATTCTGTGTTGAAACGGAGCAAGAGCGAGAGAAACAATCAAATGCGCTTCAAGTACCGACCGTGGCTCATGATTTTCCCATTCGAGAAGCGATTACCACTGACCCTCCACCGGAAAGTGGGAATGAAAGCAGTGAGATCGCTCCGGACACTATGAACGTATCGCCAGAACCGTATACCCGCAAACGATCGCACAAGGAAAAGGAAGAATTGCTACCTGCTTGTTTAAAGGCAGTACATGAATTTGCAGAAGATCAGACGTTGTCCGGTGAACGTAGTATCGTTTGTAACGATTTTGTTCCCACGGAAACACCAAAAAGAAGTAAAACTTACACCCTAAACGATGCGATGAATGAGGAGCTGCAGGCGAATTCGGTACCACCGGTGGTAGACCTAAGCAGCTACGAAGCGCGACTGAAAGCTGCAATTGATGCAGTCATAAACCAAGGCATTAGTTACCGCATAGCCTCAGCGCAGTACAGTATCGCGAAAACGGTGCTATGGCGCAAGACGATGAAAATGCACCGGCCGGTACGTGCGAGCTTGCCTAAGATGACGAATCAGCGAAGGGAAGCGATCGACGCGTTGAAATCGGGCGAAAAGCTTGTCCACGTAAGCCGTCGGTTCGAGATTCCTCTTTCGACGCTCCACCGGGAAAAACAACGGCTTTACAGCATGGGCATTCTACCGAGCCACGTGTCGCTGAAGCTTCGCGGAAAGGACGAATCCGTCCGCAAACGGTTGCTGGAGGCGGTGGGCGAGTGTGCTGCCGGCAAGATGTCACTATCAGAGGCAGCCCGCGTGTACGGTTTGCCGAAAACTTCTATCTGGCGAAGGGTACGATCGTTGCAAACATGCGGCACTGAAACTAAGGGTATAATGTCTACAGTTGAGCAGACTGACCATCTATCGATCCCTGGGGCATCTGGTGGACCGGAAAAAACAATGGATGATCTGTTGATGGGAACCGATGCTCTAGCGGTTGGTGAAGTGTACCTGACCGATGAGACCATTTCTGTGAACGAGCTAGCACAGCTACGGATCCAGCTGGCCTCTAGCTATGATCAGCATGCATTGAATGATTCTTCACAATAA
- Protein Sequence
- MEYPSSCLRWLNFSEHMLNIYYGIFQTHEYTDCRLVVPDGELYANRPILSMASSFFETIFSGVENGLLSTGTEMVTVLLPDLKLAALRSVLQFVYTGEVSVRPYEMAPFVEACSFLQIRGVRFVEDRIVGVRFGKAISLISDEPNPQHHATDSGECRTAEFCVETEQEREKQSNALQVPTVAHDFPIREAITTDPPPESGNESSEIAPDTMNVSPEPYTRKRSHKEKEELLPACLKAVHEFAEDQTLSGERSIVCNDFVPTETPKRSKTYTLNDAMNEELQANSVPPVVDLSSYEARLKAAIDAVINQGISYRIASAQYSIAKTVLWRKTMKMHRPVRASLPKMTNQRREAIDALKSGEKLVHVSRRFEIPLSTLHREKQRLYSMGILPSHVSLKLRGKDESVRKRLLEAVGECAAGKMSLSEAARVYGLPKTSIWRRVRSLQTCGTETKGIMSTVEQTDHLSIPGASGGPEKTMDDLLMGTDALAVGEVYLTDETISVNELAQLRIQLASSYDQHALNDSSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00099774;
- 90% Identity
- iTF_00099774;
- 80% Identity
- iTF_00099774;