Adir010074.1
Basic Information
- Insect
- Anopheles dirus
- Gene Symbol
- Zbtb41
- Assembly
- GCA_000349145.1
- Location
- KB673423.1:3870119-3873551[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.0076 0.42 10.6 1.3 1 20 156 175 156 179 0.90 2 16 0.48 27 5.0 1.6 1 21 191 211 191 212 0.92 3 16 0.072 4 7.6 0.7 1 20 220 239 220 241 0.95 4 16 0.021 1.2 9.2 2.8 1 16 399 414 399 421 0.83 5 16 3.2 1.8e+02 2.4 1.3 2 22 476 496 476 499 0.88 6 16 0.0011 0.061 13.3 0.2 3 21 514 532 512 533 0.95 7 16 6.9 3.9e+02 1.3 1.1 1 20 540 559 540 564 0.82 8 16 1.4 79 3.5 0.5 1 23 591 615 591 615 0.87 9 16 0.01 0.58 10.2 0.2 1 20 639 658 639 660 0.94 10 16 0.051 2.9 8.0 0.1 3 23 668 688 666 688 0.96 11 16 4.3e-05 0.0024 17.7 1.6 1 23 694 716 694 716 0.97 12 16 2.5e-05 0.0014 18.4 3.9 1 23 721 744 721 744 0.92 13 16 0.00017 0.0094 15.8 0.0 2 23 750 771 749 771 0.94 14 16 0.067 3.7 7.7 0.3 1 23 777 802 777 802 0.93 15 16 4.8e-05 0.0027 17.5 1.2 1 23 808 830 808 830 0.99 16 16 0.0002 0.011 15.6 0.1 1 21 836 856 836 857 0.94
Sequence Information
- Coding Sequence
- ATGAGCATCAAACACTGTCGCATATGTTACGGGCCGGACAACGACGACCTAATCTcggtgcagctggtgcaggATGGTGTAACGATCCACGAGATGATACTCACCATCGCCGGCATCTCTGTGACTGGCGATCGCCGTTTGCCGCAAAACATTTGTCTGCAGTGTCTGGATCGGTTGAAGATTGCATTCGAACTGCGGCGACAGTGCATCAGCACACACGGGCGATTGTGCGAGCAGTTAGGAAGTCCGGAAAAAGATGCTTCATCCCTGGAAGGCGAACTGTCCgttttggaggaaaaaacggGTGAGGAACTGCAAACGTTGCACATTGCAAGGCTTGAAGAGGAATTCGATGAGCCGAAAAGTGATTCTGACTATGAGCGGGAGCAGATTGAGTACGTAGCAATTGAGAAGCAGCACATCGAACCGTGGCGCGAGGATGTACACTTTGTGTCCGTGCAAAGCTTTCCTTGCTGTGGTTGCAGCATGCGCTTCGACACTCGCTACGAGCTGAAGGTACACTCGGTGCAGGTGCACCGGAAGGGAAGATCTCGCACCAAATTCGGCTCCTTTCTATGCACGATCTGCTACCAATCGCACACCGATCAAAGCAGCCTGGATCATCATTTGAAGTTAGCTGGAGTGAGCACAACCATGTACGAATGCTTGCACTGCTTGGAGCTTTTTGCTGACCGGAAGGAACTTTGTGTGCATCTggagcagcagaacaaaaacccaccgatCGAACTGGTGGAAGATGAGGAAATGAGTGAAATGGAGGAAGGATCCTTGGCTCCATCAACGTCACAAGAAGTAAAAACTGACCAGCCAATGAGTGAGCACGAGGAAGAATACTTGCTACTATCAGattctgctgctggagaagatgAATGTTCCATTGACATAAGCGCGAGCGAAGAGGCGAGTGTCGAGCAAGATGAAGAAGCGTGGGAAGAATCGTACGTTAAATCTCACCCAACCGATACCCACGGTGAAAGAACGCACCTTCAGCGAGCAATGTGTCGCATCCCGGAGAAAAATCTTCACATCGTGTCGGACGAACAAACGTACTTGATTGTTGAGCTACTGGGCCAgaggtgctgctgttgcgcgcAACTTTTCAACACAGAAAATCAGCTAAACACACACCTGAACAAGCAGCGGTCGATCGCTCAACCCGATCCGTACGCACGGTACACGTGCGAGTACTGTGGCAAGCCGTTCAAATACTCGCTCAGCTTCGTGTGCCACAAGCGGCTGCGCGAGCAGCGCCAGTTCTACCTCTGCCGGCTGTGCAATACGCTGCTGGACTCGGGAACGCGAATGCTTTCGCACATGCTTATGTCGGAGGAGCACGcgaatttttttaaaattacgCGCGAAAACATCTCCGACCGGTACGAAACGGTTGCATTGCCCGGGAGGCGGTGTTGCAGCTGTAAACAATACTTCGAGGACATGGACGGGCTGCTAGCGCACGTCCATAGTGCCGGCCACCGCTCGGCTCAGGGAGCGCCACAGGGCGCAGGGCGATTCGGTTGCGAAGTTTGCAAGCGTACGTTTCGAAGTGAGTCGCTGGTGGCGCGTCATCTGCGGTACACGATGGACGTTACGCAGTACTACTGCAAGCTGTGCGATTTCGAAACGTACCATTTGAGGCGCATGGAACTGCATCTGTACGGTAGCATCCATCGTGAAACCGTGCTGCCGATGCTGGGCGTCCAGTTGAAAGCACTCGAGATTCGTCCGTCGTCTGTACCTCCCGTACGGTACTGCTGTTTCGATAAGTGCAAAATCCCGTTCCAGGAGCTGGCCGCTCTCAAGCAGCACGCTGAAGCCGAACACCCGGACGAGTTGAGCGAAAACAGAGCGCGAGCGGAGCGTTTGGGTAAAGCTTTACCACCCAAACGCTACCACGAGTGTGACGTTTGTGCGCTGTTCTTCCAGAACGCCAGTACGCTCCAACGACACAAAGCCCTGAGCAGGCGGCAGGACTCCATATGCTCCATTTGTGGCGTGCGAAAGCGTAACCAGGCTGAGCTGCTCATCCACGAGCGTTCCCACACCGACGAGCGGCCATTCGCGTGCGAGGTCTGCTCCAAAGCGTTCTCGTCCAAAGCGAAACTTTGCTCCCATCTCAGCAGCCACAGTACGCGCGACCACCACTGCGACGTGTGCGGGGAACAGTTCAAGCGCAAGGAAAACCTTAAACGCCACACAATCCTGCGGCACGGCGAGGCCACCATACCGTGCGATGTGTGCGGAAAGATGTTTAAAACGGTCACGAAACTCAACATTCATGCGGCGGTACATACGGGTGAGAAGCGGTTCGTCTGTCGGTTCGACGGATGCGACAAGCGCTACATTACGGTGGGCGATCGGCGCCGGCATGAGATGTCGGTGCACACACAGGAACGGCCTTACCGGTGCACGTACTGCAAGGCCGGATTCATCCGGAAGCGCCAGCTTGTAATACACGAACGGCGTCACACGGGCGAGAAACCGCACGTATGTCCGACGTGCGGGAAAGGGTTCTACGATACGTCCCCTCTGAATGCCCATCTTCAGGCTGGTTGTAATCAGGCGAATCCTGTAGCAACGTTGAAATAA
- Protein Sequence
- MSIKHCRICYGPDNDDLISVQLVQDGVTIHEMILTIAGISVTGDRRLPQNICLQCLDRLKIAFELRRQCISTHGRLCEQLGSPEKDASSLEGELSVLEEKTGEELQTLHIARLEEEFDEPKSDSDYEREQIEYVAIEKQHIEPWREDVHFVSVQSFPCCGCSMRFDTRYELKVHSVQVHRKGRSRTKFGSFLCTICYQSHTDQSSLDHHLKLAGVSTTMYECLHCLELFADRKELCVHLEQQNKNPPIELVEDEEMSEMEEGSLAPSTSQEVKTDQPMSEHEEEYLLLSDSAAGEDECSIDISASEEASVEQDEEAWEESYVKSHPTDTHGERTHLQRAMCRIPEKNLHIVSDEQTYLIVELLGQRCCCCAQLFNTENQLNTHLNKQRSIAQPDPYARYTCEYCGKPFKYSLSFVCHKRLREQRQFYLCRLCNTLLDSGTRMLSHMLMSEEHANFFKITRENISDRYETVALPGRRCCSCKQYFEDMDGLLAHVHSAGHRSAQGAPQGAGRFGCEVCKRTFRSESLVARHLRYTMDVTQYYCKLCDFETYHLRRMELHLYGSIHRETVLPMLGVQLKALEIRPSSVPPVRYCCFDKCKIPFQELAALKQHAEAEHPDELSENRARAERLGKALPPKRYHECDVCALFFQNASTLQRHKALSRRQDSICSICGVRKRNQAELLIHERSHTDERPFACEVCSKAFSSKAKLCSHLSSHSTRDHHCDVCGEQFKRKENLKRHTILRHGEATIPCDVCGKMFKTVTKLNIHAAVHTGEKRFVCRFDGCDKRYITVGDRRRHEMSVHTQERPYRCTYCKAGFIRKRQLVIHERRHTGEKPHVCPTCGKGFYDTSPLNAHLQAGCNQANPVATLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -