Basic Information

Gene Symbol
RERE
Assembly
GCA_000349145.1
Location
KB672868.1:439644-635554[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-11 1.8e-08 33.8 0.1 2 45 1665 1709 1664 1710 0.91

Sequence Information

Coding Sequence
ATGGCTGCTGTTAACTCGGTTCCGAATAGCATCCGGTTGCCGCTGGCCGGTCTGGCGCCACCGCGCGTCCTTATGTGCAGTGCCTCGATGGGAGCGGAAGGTTCCGTCACGCTCCAGCTCCGGGAAGCGGTGCAGGCGCCCGATGCGTCCGGTTCGCTCGACGGCGCGCTCACGATCGGCTATCCCGATCCGGAAATGCTGGCCGACATGCTGGGCACATTCCAGGGCGCTTCGACCGGGGCGGCCGACCCGGACGCGACCACGGCGTTCGACCTGCTCCAGGACAGCAACGGCAGCCCGGCCGGGGGGGCAACGCTCCGGGCGACCACCGCCGAACAGATCGAACATCTCACCGGCGCTCTGCTGGCGAAACCGGTCGGAAGCAGTaacggcagcagtagcaccagcacGCCCACCGTAACGATCAAGACAGAACCGGGCACGAAAGCAGCCGCGGACAAGACGAGCGTAACCACCGCGAACCTGCTCAGCCACTCGGCGTCCagcgcaagcagcagcagcagcaccaacagcaccagcagcaacaacctgTCGCCATCGTCGACAGCCATCCTGCACCACGGCACCACGATGGTGACCGTGAAAAGTTCGCCCGGCATCGGCGGTCTCGGTGGAAACGGGGGCAGCATTGCCGCGACCAGCCCCACCAGCCTCGTGCTCACGACGGTTAGCCGGGCCGAGACGGCTTCCGGCAACAGTAGCGCATCGTCATCCCCGTCGGCCGCCTCGTCGCCGGGCGCGGTCTCGCTGAACGGGCTGTCCGGTGGATTGGCGAAGAAACCACGGCCCAAGACGGTCTCCCCTACCCGGCACGGGCCGCAACAGTGTCAGGTCTGCAGCAAAGTGTTCGGGAATGCATCCGCCCTGGCCAAACACAAGCTGACGCACAGTGACGAGCGTAAGTACGTGTGCGGGATGTGCTCGAAGGCGTTCAAACGGCAGGATCACCTCAACGGACACATGCTGACGCACCGTAACAAGAAACCGTACGAGTGTAAGGCGGATGGGTGCGGCAAGTCGTACTGCGATGCGCGGTCCCTGCGGCGTCACACGGAGAACCATCACAGTGCGCTCGGGCTGGCGGCCGGTTCGTCCGACACGGCGAGTCCCGGCCCGGGCGGGAGCAATGCAGGACCACCCGGTGGACTCAGTTTGTCGCCGGCGACGGCGAGCGGTGATGCCAGCTCCCCGCACGGTGCAACGCTCGTCCAGTTCAGTGTGAACGCGGGCAACGGTGCAAATGGCAACTCCTCCAGCAACAGTAATTGCAGCctttcgagcagcagctcgagcagtagcagcagctccagcagcagcagcagtagtagtagcagtagcagcagcagcagcagcagtggaaacGTGAGCGACTCAAGCTCCAGCTGTAAATCGCCCTCGCCAAGCTCACCGGCGCCGGGCACGGGCAACGAGGGCCTAACGCGCCAACAGCTCGATCTCATCTCGCAGATCATGCAGCAGACGAAGCAGGCGAATGCAGCCGTTgccgcggcggccgctgctgctgcgaacgcGAACGGTAGTGGCATCGTCACGACGGTCGCGGCAGCACCCAGCCAGAAGGTTCCGGTACGGCCACGAACCTGGAACATGCAGCTGCAGCTCAGCCAGAACAAGCTGTCCGCAACGACCGcaacgtcgacgacgacactGACATCGGCTTCGGCGGCATCGGCAGCGACGGTGGTCAGTGCAGTGCCCGTGCCTTCAATGGCAGTCACAGTGacgtcggcggcggctgccaccaccagcgccatcaATCCCACCGTCAGCACCCTGCCCATCGGCAGCCTCATCGGCAAGGCGACGAGCGCAAGTGCTGCCGCCGATGCTAATGGACCACTCCCAGCGACGATCACGGTGTCATCCGGGCCCTCCGGCAGTGCGGTCAGTGCGGtttcgacgacgacaacgacgaacACGCCCACAGCTGCGGCGGCGACGGTAACGCCGCCAGTTACCGTGCCGACTGGGAGCCAACCACCTGCTACGCAACAACCTGCCGCCCCTGCcggcaccaccatcaacaccaccaccaccaccaccaccaagctCGAGCAGAAGCCGGTCGAGTGCAATCTGTGCCATCGGAAGTTTAAGAATATTCCCGCTCTGAACGGGCACATGCGGCTCCACGGGGGCTACTTCAAGAAGGACTCGGAGGCGAAGAAATGTGATAAGAAGGAGAACACCGGCCCACCGCTGCAGACGGCCAGCGTTGGCGTGCGGGCGCTGATCGAGGAGAAGATCATCAACAAACGCAGCAAGGATCTGAAGAATCTCTTATTGAAGGGTTCGTTCGTCGTTCCGGCCCCGCCGCTGACCGCCCGCCGGCTGATCGACGCCAACGAAGCATTCCTGTCACCGAAGGCGGGCACGGTCGCGATCGTCTCGACGTCGAATGGTACCACGCAGATCATCAACACCGCCACGCTGCACTCGAAGGCCACCACCGTGCTGAGCGCGAACAGTGCTCCCCAGCCGGTCGCCCCAGCGCCGTCGATAACGATCAACGGGTTGGGGGTAGCGGCAGGCGCGGCCACCAACGCGACGGAATTGAAGGACGCCACCTTGATCGAGCTGTTGAAGCGCGGCACGAAGGTGGCCGTGAAACGGGCTTCCGCGACTGGGGACACCTCGACGATCCTGTCGCTCCAGCCATCGGCCGGTGCGACTCCGACGATCTCCTCCACAGCGACGTCCACCCATGCAACGGCTCAGCTGATCACCTCGGCCAGTagcacacgcacgctcacGGTTCTTCCGGGCGCAACGCTGTCCGCAACGCCCAAGATGACACCCGCGATCACCGGCAACGGCAGTCTGATGGCTAACTCGAGCGGAGATAGCAGCCCCCTATCGCTCACCATATCGCAAACTCCAACCTCAACTCCCGGAGATGTATTCACGCTTGCCTACTCGACCGATTTCGGAGACGGTGATGTGTACAGTGTGAGCGACACGGCCATGCTGCTGCAAGCCGTTGATCCGatccagctgctgcaggattCAAACTCCACCGAACCGCTGGACGAGATCGCCCTGTCCGACTACGGCTCGATCAGCGATCAGGGCTTTACACCGTCGCGTCAGATTCAGGCCGTCCTAGACTCGCCGCTCCCGGAGGGACTGGCCGAGTTCGGGGCACTGCACGCCAAAGACTTCAGCGTCCTGTACGGTGGCACCCCATCGTCCAGTGACACGAACGGAGGGGGCTCATCCTCCACCAACCTACTGCAGTCTTCCCCATCGGGTGCCCATCTCTCCCCGCTGCCCTCACCACTGGCCTACCCGACGCCGCCCGCATCCCACGAAGCCGTGGCGCAAGCATCGCCTTTCCTGGACGACTCGCGCCACTTCACCGACGCGAGCCCGTTCTTCGACGATAAGCGCGGAGCGCAGAGCTTCCTCGACGACGGATTCTTCAAGAGCGAGCCGAAAGACGGGTCGGACGCATCGAAGGTGTCGGACAGCGAGAAGATACTCGCGCTCAAGCACGAACTGCTGGACGAAAACCACGACCTGTTCCGGTCGAACAAACACCTGCTCGACGATCACTGTTCGGAGCTGTTCAAGTCGGAGGATAGCTTCTTCGCCGAATCGAAACCGACCTCGGTCGACGGGTCGTCCAAGATGAACCTGGACTTCCTGGACGACGCGCAGGTGTTCATCGAGGAAACGCGAAACACTTCCTCGCCCCTGTCGAACGCATTCTTCTCCGCGACGATGTCGTCGGCGGCGGAGGTGAAGGAGGCACTGGAGGAAGTGCTGccgaacgatgacgatgacgacatcGGTGTGACGGAGGGTGACATCGATCTCTACTACCTGAACGGCCTTTCTTCGCTGCAATCGCAGATGATGCCCAACTCGGACGATCCGCTGCTGTCGTCATCACCGAAGGACTTCGCCCACCGGCAGCATCAGAAGTTTCTGTTCGAGCAGAGTCAagccgcccagcagcagcagcttcagcagcatcagcaacaactgcagcaacagcagctccaacagcagcagcagcagcagcagcagcaacaccatcaccaccaccaccaccaccaccagcaacagacATCGCTGGGTGTTACCACAACTAACCACTGCATGCCTCCTAGTGCCAAAAAACTGAAACCCTCCGACAGCGACACGAACGCGACGTTCGGTGGCGACGCGAGCAAAGTGCCGCTCACGGTGCAAACCGACCCGATGCCGAAGGATGCGGACAGCGTGTTCCTGAGTCCGAGCAGTCTATCGTCGCACAGctgctcctcgtcctcctcctcgctgtCCCTGTCGTCCGTTGCGTCTCCGAGGTTGCAGCACGCACTCCTCGGCAGCACCAGCTCCGGCGGGTCCGTGTGGCCCCGAAAGCGTTCCCAAACCTCATCCAGCGGTGCTGTCACCGTTCCCAGCCTACCGGCCGGCCAGCGCAAGCCAACGGTCTACCTATCGAAACTGCGTCGCTCGACGAGCTCACTGCTGCCGGCGATCCACTACACGCCCTCACCGATGCTAAATCCCGAGCGTACCGCCGGCACAACCGGTCTGTATACGAGCGTTACCCACGGCCGGATGGCAGGCGCGGCGGACGTCGATCTCGACTCCACCATGGACAGCACGAGCGACATCTTCTCCGAGCCACCGTTGCCGATACGGCCGCGCATCAATCTCGGACCGGACTATCAGGCAACGCTGCCCGACTGTACCCGGCCCCCGTACGGTGGACTGCAGCAGTTCCACGCCACCACCCAGCACGCCCAACGCCTGTGGGATCCGGCGTTGGCCCCGAACGACCGGCAGGTGCAACGGTTCGTCGAGCTGGCGCGCTCCTCGGCCGCTCCGCTCGGTTGCCACTCGGAGGAAAATGCCCTGCGCGCCCTGCTCGAAGCCAACGGGGAGATCCAGCAGGCCGTACTGGGCATGCTGCAGGGCCCGCCGGCCACCATCCACCGTCGCTGGACGGCCGATGAGATCGAGCAGCTGATCCAGGGCCTGGAAGAGTACGGCAAGGACTTCCACCGGATCGCGCGCGACCTCCTGCCCGGCAAATCCACGGCCGACTGTGTGCAGATGTACTACTTCTGGAAGAAGCTCGGCATCGACTACAAGGGCACGTCGCTGGCCGGACCGAAGTATGCCGGGCTGCACACCGGGTCACCATCGCCGGcgccgtcgccaccggccccaccaccaccggtcgaAGATCTGCTGCTGGATCACCTGGACTACACggccaacaccaccaccgtcgggaTGCATCCCAGAACGCCGCACGCCAGTCCGCCCGGCACGACCCAGGCCAGCCTGCCACAGAACGGCCACGGCACTAGTGCGCCCAGCGACGTCCGACCGCATGTCTGTGAGGTTCCTGACTGTTCAGCGAGCTTCTCGTCGAAAGCGGCCCTCCACGGTCACATCCGCATACACTGCATCGGACGTAGCCACGGCGCAGTTCAAAATGGGTATTCAATAAGGTAA
Protein Sequence
MAAVNSVPNSIRLPLAGLAPPRVLMCSASMGAEGSVTLQLREAVQAPDASGSLDGALTIGYPDPEMLADMLGTFQGASTGAADPDATTAFDLLQDSNGSPAGGATLRATTAEQIEHLTGALLAKPVGSSNGSSSTSTPTVTIKTEPGTKAAADKTSVTTANLLSHSASSASSSSSTNSTSSNNLSPSSTAILHHGTTMVTVKSSPGIGGLGGNGGSIAATSPTSLVLTTVSRAETASGNSSASSSPSAASSPGAVSLNGLSGGLAKKPRPKTVSPTRHGPQQCQVCSKVFGNASALAKHKLTHSDERKYVCGMCSKAFKRQDHLNGHMLTHRNKKPYECKADGCGKSYCDARSLRRHTENHHSALGLAAGSSDTASPGPGGSNAGPPGGLSLSPATASGDASSPHGATLVQFSVNAGNGANGNSSSNSNCSLSSSSSSSSSSSSSSSSSSSSSSSSSSSGNVSDSSSSCKSPSPSSPAPGTGNEGLTRQQLDLISQIMQQTKQANAAVAAAAAAAANANGSGIVTTVAAAPSQKVPVRPRTWNMQLQLSQNKLSATTATSTTTLTSASAASAATVVSAVPVPSMAVTVTSAAAATTSAINPTVSTLPIGSLIGKATSASAAADANGPLPATITVSSGPSGSAVSAVSTTTTTNTPTAAAATVTPPVTVPTGSQPPATQQPAAPAGTTINTTTTTTTKLEQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSEAKKCDKKENTGPPLQTASVGVRALIEEKIINKRSKDLKNLLLKGSFVVPAPPLTARRLIDANEAFLSPKAGTVAIVSTSNGTTQIINTATLHSKATTVLSANSAPQPVAPAPSITINGLGVAAGAATNATELKDATLIELLKRGTKVAVKRASATGDTSTILSLQPSAGATPTISSTATSTHATAQLITSASSTRTLTVLPGATLSATPKMTPAITGNGSLMANSSGDSSPLSLTISQTPTSTPGDVFTLAYSTDFGDGDVYSVSDTAMLLQAVDPIQLLQDSNSTEPLDEIALSDYGSISDQGFTPSRQIQAVLDSPLPEGLAEFGALHAKDFSVLYGGTPSSSDTNGGGSSSTNLLQSSPSGAHLSPLPSPLAYPTPPASHEAVAQASPFLDDSRHFTDASPFFDDKRGAQSFLDDGFFKSEPKDGSDASKVSDSEKILALKHELLDENHDLFRSNKHLLDDHCSELFKSEDSFFAESKPTSVDGSSKMNLDFLDDAQVFIEETRNTSSPLSNAFFSATMSSAAEVKEALEEVLPNDDDDDIGVTEGDIDLYYLNGLSSLQSQMMPNSDDPLLSSSPKDFAHRQHQKFLFEQSQAAQQQQLQQHQQQLQQQQLQQQQQQQQQQHHHHHHHHHQQQTSLGVTTTNHCMPPSAKKLKPSDSDTNATFGGDASKVPLTVQTDPMPKDADSVFLSPSSLSSHSCSSSSSSLSLSSVASPRLQHALLGSTSSGGSVWPRKRSQTSSSGAVTVPSLPAGQRKPTVYLSKLRRSTSSLLPAIHYTPSPMLNPERTAGTTGLYTSVTHGRMAGAADVDLDSTMDSTSDIFSEPPLPIRPRINLGPDYQATLPDCTRPPYGGLQQFHATTQHAQRLWDPALAPNDRQVQRFVELARSSAAPLGCHSEENALRALLEANGEIQQAVLGMLQGPPATIHRRWTADEIEQLIQGLEEYGKDFHRIARDLLPGKSTADCVQMYYFWKKLGIDYKGTSLAGPKYAGLHTGSPSPAPSPPAPPPPVEDLLLDHLDYTANTTTVGMHPRTPHASPPGTTQASLPQNGHGTSAPSDVRPHVCEVPDCSASFSSKAALHGHIRIHCIGRSHGAVQNGYSIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00103982;
90% Identity
iTF_00099256;
80% Identity
iTF_00099256;