Basic Information

Insect: Anopheles dirus
Gene Symbol: -
Assembly: GCA_000349145.1
Location: KB672490.1:10248414-10254130[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.72 9.8e+02 -1.0 0.0 27 41 86 100 86 101 0.79

2 5 0.00047 0.64 9.2 0.0 5 35 252 282 251 288 0.90

3 5 1.2 1.6e+03 -1.6 0.0 18 35 364 382 358 386 0.79

4 5 0.00043 0.58 9.4 0.1 5 38 435 468 434 471 0.85

5 5 0.0003 0.41 9.9 0.1 4 26 539 561 538 576 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.72	9.8e+02	-1.0	0.0	27	41	86	100	86	101	0.79
2	5	0.00047	0.64	9.2	0.0	5	35	252	282	251	288	0.90
3	5	1.2	1.6e+03	-1.6	0.0	18	35	364	382	358	386	0.79
4	5	0.00043	0.58	9.4	0.1	5	38	435	468	434	471	0.85
5	5	0.0003	0.41	9.9	0.1	4	26	539	561	538	576	0.88

Sequence Information

Coding Sequence: ATGGAACAGTGGAGCAACCAGTCGACTAGGACAATGGTTATGTGGCTTGACTATAAGCAGCACATGCATAGCACCTTGAGGTGCATTTTCGATCGCCCCCAGTTCACCGACTGTCGACTGATCGTGCCCGGCGGGGAAGTGTACGCCAACAGTGCCATTCTCGGTATGGCGTCCAGCTTCTTCGATAAAATTTTCTGCAGCACATTTCATCTGCCAGCCGCGCTAGCAGCAGAAGCTCCGACCGTTCTTATTCCGGATCTCTCGTACTCCACGCTGCAGCTCGTTATCCGCTTCATCTACACCGGCAACGTGACGCTGCGTTTTGAGGAGATTAAGTCCTTTGTTGAGGCCTGTGCTATGCTTCAGATCCGTGGCATCGATTATTCCGACAACCGTGCGGTGGGCATTCACATCAAGCCTTCGGCGACCCACGTTTCGCCATTGAAAAACACTTCCGGCGCGTCGCCAAAGACGATGGTTCAGCAGCCGAATCACACTCTTCCACAGGATGCTGTGTTTATTGAACTAGAACCTAGTGACGATTTGTTGGAGCTGAAACGGGAAACGACGGATGATTTCAGTACTCTAGAAGCTGGCTATGAAGAGCGGATGGTAGAACCGGACCAAGACCCTTTGGCGACGGGCCGAAGAAAGATCGCAGTGTTCGCTGATCCAGAGACGGGTGACAAGTTCGCTTCGGTAGCGAAGAAACGCGCACGccgaaacgaagcaaagaAAACGTACGCCGTCTGTCTGAAAGCGGCAATCACTGCGGTGCTGGACGGTAGCTTGTCCTGCGTGCAAGCCTCGTTACAGCACAAAATTGCCCGTAACAAACTATGGAGCTGGGCGCAGCAGGTGCACCGTGCGATGGACTCGGTACAGTACGACGAGGACGCGGAACTGCAGTCGGCAATCACATCGGCAATGATCGATTCCGTGCTGGATGAAAGCAAGCGCAACGTGAACGGCATACTGGCAGGCGACGATGAGTGCGCGAAGGCGGCCATGTTGGACAAGTCGGTGAATACGCTAACGTACGACGCGCGCATCATGGCCGCGCACGACGAGATCTTCCAGCGGGGATCAACCATCCGTACGGCCAGCGTGCGGTACAACATCACCTGCCGGGTGCTAGCGAGTCGCGCCAACAATCTCCAGCAGAGGGCACCTCCCGCGCACAAACAGCAGCGGTACCGGCAACGGGAGCGTGTTGGCGGCACGGAGACCCGCAGGTTCGGCTCCGTTGGCCCACTGACCGGTACGGTGCGGCGTGTCTACACACCGAGCGAGATTGTGCGCCTGAAGGCAGCGATCCGGGCGGTCGTCATCGACGGTATGGATGAAACGATGGCGAGCCGCAAATACGATATCAGCCGGAGGTTAATACAGCACCGGGTACGCAACGTGGCCTGTCTATCGCGCACGAACCCGCCGGCCGGTGACGTTCGCTGTTTTACCGAGCGTGTCGACGCGGCGATCGAGACGCTGCTGGCGGACAGGACCGTGGCGAAAGCAAGGCCCGCgacgaagaaagaaacagcGGCCAGAACTAAACCGTCGATGGTGGGCACGATGCTGCGGCGGCTTGATGATCCAAGAGCGTACGCGGCCAGCATGAGGGAGGCGACCAACGCGATCGCTAACGGCGACATGACCTACAGACAGGCGTCCGATCAGTTCCGTCTGCACAGCAGCGTCCTCTGTCGGCAGGTGGCGCGAATGAAGAATCGAATCTTCGCGGACGGTGCACCGCAGTCGTCGGAAGCAACGGAAAGCCTTGGACAGGCGGAAACATTCGAGAGAGTGCCGGAGGTGCAGCAACTGGAAATGGCAGATGTTATTCCCTTCAGCGATGACGATGCCATGGCGTCCGATTGTGAAGTCTCCGTTATTAACAAGCTGGCTAGGGCGGGCAGCAATGACGAGTTTAAAGAGCTCATGACGATGGATATCGAATGCTTCGAGACGCTGCTGCGCAAGGTGGAATGTACTATCGCGAAACAGAAAACTTACATGCGCCACCCAATACCGGCCCGCACTCGGCTCATCGTAACGCTGCGATATCTGGCGACCGGCCGAAGCTTCGGCGATTTGACAAACGCGACGAAAATTTCCAAAGCCGCCTTGTCGAAGCTCATCCCCGAAACGTGCGCTGCCATCATCGACCAACTGGCGGAGTACATGCACtTACCACAGTCGATGCAGGAGTGGGAAGACACAGCCGAACAGTTCGCACTCCGGTGGCAGTTCCCCCATTGCCTCGGTGCAATCGAAGGGAGCCACGTGCTCATCGAGAAACCCCCCAACTCCGGTTCCATGTACTACAACTACAAAGGGACGCACAGCATCGTGCTGCTAGCAGTTGTCGATGCGAACTATCAATTCCTGACGGTATCCGCCGGCATGAACGGACGACTGTCGGATGGGGGTGTGCTGCGCAGTTCCGCATTTGGAACGGCGCTGCTCGAGGAGACGCTGAACCTTCCGCATCCATCGCCGCTGGCAGGCAGCGACCGGGTGGTACCGTACGCGTTCGTAGGCAACGAGGCCTGTGGTATGCACAAACACGTGCTAAAACCTTACCACCGCAGCGAGCTGAACACGGCCGGGCGAGTTGAGTATAACGCCCGGCTCGGTAGAGCAGGCGCCGTTGTGAAGGTCGCTCTCGCTAGGCTTTGCGAGAAGTTCAAGATTTTCCAGCAGCCCATTAGACACGCACCGGAAAAGGCAAGTCTGATTGTGATAGCCGCCTGCTATCTGCACAACTTCCTGCGGCGCGCATCCGATCCCGTGTCAACGACGGTCGGGGATACGTTCGTACCGGCGGAGGAAGTGCAGCTGCGTTTGCTGGAATCCGCCGAGGCAAACGAGGTGCGCGAGGAGTTTTGCGAGTACCTCAACGCAGAGGGCAGAATAAGTAGTTAG
Protein Sequence: MEQWSNQSTRTMVMWLDYKQHMHSTLRCIFDRPQFTDCRLIVPGGEVYANSAILGMASSFFDKIFCSTFHLPAALAAEAPTVLIPDLSYSTLQLVIRFIYTGNVTLRFEEIKSFVEACAMLQIRGIDYSDNRAVGIHIKPSATHVSPLKNTSGASPKTMVQQPNHTLPQDAVFIELEPSDDLLELKRETTDDFSTLEAGYEERMVEPDQDPLATGRRKIAVFADPETGDKFASVAKKRARRNEAKKTYAVCLKAAITAVLDGSLSCVQASLQHKIARNKLWSWAQQVHRAMDSVQYDEDAELQSAITSAMIDSVLDESKRNVNGILAGDDECAKAAMLDKSVNTLTYDARIMAAHDEIFQRGSTIRTASVRYNITCRVLASRANNLQQRAPPAHKQQRYRQRERVGGTETRRFGSVGPLTGTVRRVYTPSEIVRLKAAIRAVVIDGMDETMASRKYDISRRLIQHRVRNVACLSRTNPPAGDVRCFTERVDAAIETLLADRTVAKARPATKKETAARTKPSMVGTMLRRLDDPRAYAASMREATNAIANGDMTYRQASDQFRLHSSVLCRQVARMKNRIFADGAPQSSEATESLGQAETFERVPEVQQLEMADVIPFSDDDAMASDCEVSVINKLARAGSNDEFKELMTMDIECFETLLRKVECTIAKQKTYMRHPIPARTRLIVTLRYLATGRSFGDLTNATKISKAALSKLIPETCAAIIDQLAEYMHLPQSMQEWEDTAEQFALRWQFPHCLGAIEGSHVLIEKPPNSGSMYYNYKGTHSIVLLAVVDANYQFLTVSAGMNGRLSDGGVLRSSAFGTALLEETLNLPHPSPLAGSDRVVPYAFVGNEACGMHKHVLKPYHRSELNTAGRVEYNARLGRAGAVVKVALARLCEKFKIFQQPIRHAPEKASLIVIAACYLHNFLRRASDPVSTTVGDTFVPAEEVQLRLLESAEANEVREEFCEYLNAEGRISS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00099118;
90% Identity: iTF_00099118;
80% Identity: iTF_00099118;