Adir005309.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anopheles dirus
Gene Symbol
bab1
Assembly
GCA_000349145.1
Location
KB672490.1:19328617-19492709[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.6e-17 3.5e-14 51.7 0.0 1 43 626 669 626 671 0.95

Sequence Information

Coding Sequence
ATGCCATCGGacacaccgccaccaacaGCCCCGGTGTCCCATCCGTCACCAGCGTCGTGCCACGACCCGAACGAGCCCGCGCATCCCCGGGAACCGAGCGGCACGGGCCTATCGCACCAGGAAGCGGACCGTTCGCCCGGTCCATCCGACCGGGAGCCGCCCTCGGTGGGGCCGTCCGCGGCAGCCGCCCATCTGCTGCACGCCCCGCACAACACGTCGAgttcctcctcgtccagctcgtcgtcctcgaCGTCCTCGAGCGCGTCGTCCTCGCTGTCGTCGCTCTCGCTgaagcgcgcgctcgcaccggaAGAACCGGCCACGAAGCCGTCGCCACCGTGCTCGCCGCTCACGATGGACCACCATCTGCAGGCACACAAGGCGTCGTCGCGAGCGACGACCGGAAGCCCTGCCGGGCgcaaccaacagcagcaacagcagcagcagcagtcgggcGCGAGTACCACCACCGGTGCAGGCGGTGGCCAGCAGTTCTGTCTGCGCTGGAACAACTACCAGACGAACCTGACCAGCGTGttcgatcagctgctgcagagcGAGTCGTTCGTGGACGTGACGCTCGCCTGCGACGGCCAGTCGATGAAGGCCCACAAGATGGTGCTGTCCGCGTGCAGTCCCTACTTCCAGACGCTCTTCTTCGACAACCCCTGCCAGCACCCGATCGTGATCATGCGCGACGTCAGCTGGGCCGAGCTGAAGGCGATCGTGGAGTTCATGTACAAGGGTGAGATCAACGTGAGCCAGGACCAGATCGGCCCGCTGCTGAAGGTGGCCGAGATGCTGAAGATCCGCGGGCTGGCGGACGTCAGTGGCGAGGGCGGTGAGACGACCGCCGGCGGTCGCTCGGACCGCGACGGTGCCGGAAGCCGTGGTCCGGACGACTTGGAGCGCGACGACCACAAACTGCTCAACCCGCTCGCGATCGTGCACAGCTCGCTGCTGGCGAATGGAGCCAACAGCTCCGCGCCGGGCAGCCTCGTGACCGGCGGCTCGGGTGGATCGCTCGGTGGCAACAGTACGGCGACGAGCGGAGGAGCCGGGGCCgccgtggcggcggcggctgccgcggccgccgccaagAAGCAGCGATCGGGCCGGGGCGATCGCGACACGACCAAAGACCAGCACCGGCTGGACGCGCGCATCAGCGACTTCGCGCGCGATCTGTCGCGCGATGCGCACATCTCGTCGCGGGACATCAGCAgcgtggcggcggcagcggctgcggcggcggccgccgccggacTGGCCGCCGGCGACTGGCCGCTCGGGCCGGCCGGGCTCgaggcggcggcagcggccgccgtCCAGGCCTCCACGCCGAAGAGTGCGCGCAAACGGCGGTGGCCCTCGGGCGAGCGGAGCAGCATCGGCAGCCCGGCCGAAAGTACGCCCGACCAGCTGGACGTGCCGTCCCCGATCCCGCCGACACCGACCGGTATGGCGCAAACGAGCGGGGGCGGTGTTGggggcagtggtggtggtggaggtggggGTGGGGCGTCGAGCAATCCGCTCGCCTCGTTCCCGCTACCACCGGCGCTCGATTCGGCCGCCATGGCCatgtcgtcgctgtcgtcctCGATCGCCAACCATCCGGACGACATGGAGATCAAGCCGGGCATCGCTGAGATGATACGCGAGGAAGAAAGGATTGCTCACGTACCATCCAACGACGTACAGAGAATGgCTAAACTGCTAGAAAACTCCCAGGCATGGCTAGGCGCGTCTACGTCATCAATCGCCGccgaaaGTTACCAATACCAGCTGCAGTCGATGTGGCAGAAGTGCTGGAACAGCCAGAACCTGATCCACCATCTGCGCTTTCGCGAGCGCGGCCCGCTGAAGTCCTGGCGCCCGGAAACGATGGCCGAGGCGATCTTCAGCGTGCTGAAGGAGGGCCTGTCGCTGTCGCAGGCGGCCCGCAAGTACGACATCCCGTACCCGACGTTCGTGCTGTACGCGAACCGCGTCCACAACATGCTCGGCCCGTCGATCGACGGCGGCACGGACCTGCGGCCGAAGGGGCGCGGCCGGCCCCAGCGCATCCTGCTCGGCATCTGGCCGGACGAGCACATCAAGGGCGTGATCAAGAGTGTCGTCTTTCGCGATGCCAAAGAGATGAAGGAGGAGCCCATGATGTACGGGAGACACTCTCCTTTTCCCTTTCAAGACAACCCGCTGAGCTACGCACCGACCGCACCGAACGGCCAGCTgtcggccgccgccgccgcagccgctgccgccgccgccgccgccaccggcaccgtcccGGACGGCATGTCGCAGGACGCGCTGACCGCCGCGACCGTCGCGGCCGTCCGCCAGCAGATGTGCAACATGGTGGCGGCCGCCCAGCATCACCCGGACGCCGCCAACCTGATGGCGGCCGGGTTCAACCTACCGTCCCACTGCGGTGGCACCCCACCGAACCTCAGCATCCAGCATCCGGCGTCGACGGCCGCGGCGgcagctgcggcggcggcggcggccgctgcagcggcggcATCCTCGAACTCGGGTGGCccgagcggcggcggctcgTCCGGGGCGATCCCACTCCCGAAGCTGGGCTCCCCGGCCGTCCCGTCGACCGGCCACGGCAACAACAATGGCGGCTCGGGTGGCATTCAGATGCCGCGGCTCGGCTCACCGGCCGGTTCGAGCGGGCTGGCGAAGGAGCACGACCTGCAGCatcacggcggcggcggtggcatcggaggcggcggtggtggagggggTCCGGCGGGAGGTATGTCCCGCGCCACACCCCCCGGCGTCCGCGAGCGAGCGCTGACGGCACGATCCAACATGGCCGCCAGTGAGTCGGGCCGGAGCAGttccaccggtggcggcggcggcggcaacgtCCACCGTTCGTCACCTTCGAGCAGTGCGGCGTCGTCCatgaaccaccaccaacaccaaccgtCGCATCTGccgcaccatcaccagcaccaccaccagcaccatcaggCACCCCCGTCACACCACGGTCACCACGGCCACCATCTGCCCCACCACAGCAACCCCCTGGCGCATCTCGGGTCCGGCGCGCTCAGCATAACGAAGCTCGGTTCGCCCGGCTCCGCGCACGATCTGCGCATCAGCAACAGCCCGGACGAGATCGGGATGGGGCTGGAGCCGGCCGTCAACCTGGCGCTCGGAGCGCCCGGTTCGCAGCCAACCGACGACGGCCGCCTCCACGTGCCACCACCGTATGGCAGCAAGCCACCGTCGCGCGGAGGAACGGCCGGATACGGCGCCAGCGTGTCGCCACCGCGCCCGGAACACCTGTTCCAGGATCAGGACCTGGCGGCGCTGGTTGCCACGACCCGGGCCGCCTGTCCACCGGCGCGCCTGCCCGACTACAAGGACAGCCCGGTGAGGCCACCGGCATCGATCAAGGTCGAACCGCTCACTGAGTGCCGCGGTGACTAG
Protein Sequence
MPSDTPPPTAPVSHPSPASCHDPNEPAHPREPSGTGLSHQEADRSPGPSDREPPSVGPSAAAAHLLHAPHNTSSSSSSSSSSSTSSSASSSLSSLSLKRALAPEEPATKPSPPCSPLTMDHHLQAHKASSRATTGSPAGRNQQQQQQQQQSGASTTTGAGGGQQFCLRWNNYQTNLTSVFDQLLQSESFVDVTLACDGQSMKAHKMVLSACSPYFQTLFFDNPCQHPIVIMRDVSWAELKAIVEFMYKGEINVSQDQIGPLLKVAEMLKIRGLADVSGEGGETTAGGRSDRDGAGSRGPDDLERDDHKLLNPLAIVHSSLLANGANSSAPGSLVTGGSGGSLGGNSTATSGGAGAAVAAAAAAAAAKKQRSGRGDRDTTKDQHRLDARISDFARDLSRDAHISSRDISSVAAAAAAAAAAAGLAAGDWPLGPAGLEAAAAAAVQASTPKSARKRRWPSGERSSIGSPAESTPDQLDVPSPIPPTPTGMAQTSGGGVGGSGGGGGGGGASSNPLASFPLPPALDSAAMAMSSLSSSIANHPDDMEIKPGIAEMIREEERIAHVPSNDVQRMAKLLENSQAWLGASTSSIAAESYQYQLQSMWQKCWNSQNLIHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKSVVFRDAKEMKEEPMMYGRHSPFPFQDNPLSYAPTAPNGQLSAAAAAAAAAAAAATGTVPDGMSQDALTAATVAAVRQQMCNMVAAAQHHPDAANLMAAGFNLPSHCGGTPPNLSIQHPASTAAAAAAAAAAAAAAAASSNSGGPSGGGSSGAIPLPKLGSPAVPSTGHGNNNGGSGGIQMPRLGSPAGSSGLAKEHDLQHHGGGGGIGGGGGGGGPAGGMSRATPPGVRERALTARSNMAASESGRSSSTGGGGGGNVHRSSPSSSAASSMNHHQHQPSHLPHHHQHHHQHHQAPPSHHGHHGHHLPHHSNPLAHLGSGALSITKLGSPGSAHDLRISNSPDEIGMGLEPAVNLALGAPGSQPTDDGRLHVPPPYGSKPPSRGGTAGYGASVSPPRPEHLFQDQDLAALVATTRAACPPARLPDYKDSPVRPPASIKVEPLTECRGD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00105069;
90% Identity
iTF_00099076;
80% Identity
iTF_00099076;