Adir004206.1
Basic Information
- Insect
- Anopheles dirus
- Gene Symbol
- -
- Assembly
- GCA_000349145.1
- Location
- KB672490.1:10261783-10263219[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.3 1.8e+03 -1.8 0.0 3 21 219 237 218 237 0.82 2 4 1.4e-08 1.8e-05 23.8 0.0 2 35 262 296 261 301 0.90 3 4 0.0019 2.6 7.3 0.0 23 37 334 348 333 355 0.82 4 4 4.2e-10 5.7e-07 28.6 0.1 4 39 375 410 374 414 0.93
Sequence Information
- Coding Sequence
- ATGGCACTTACTACCGCGTCGGACAAATCCAGCGTGAGATGGATCGGTTTCCAGCAACATGTTCGGAGCACCTTCCACGACATCTTTGCGGCATCCCAGTTCCCCGACTGCCGTTTGGTTGTGGCGGACGGTGGCGAACTGTTGGCCAACTGTACCGTCCTCGGCATGGCATCTAGTTTGTTCGGGACAATCTTCTCCGGCACCGCTGTGACGCATCtgccggtgacggtgctgATACCGGATTTAACGCTGCCGGCCGTTCGGCTCGTCCTGCAGTTCATCTACACCGGTGTGGTCAATTTGCGGCCGTTCGAGGTGGCATCGTTTATCGAGGCGTGCGGTTTGTTGCAGATACGTGGAATACAGTTCATTGGCGACCGTGTGGTGGGCATACAGTTCGTAAAGTCTCTTGATTTGGACGTGGAGACGGAATCGACAGGGGAAGTAACTACCTCAACTGAACAGCCGGATGTGGCAGAGGCAATCGACGATCGGACAGAACAAGAGATTGGTCCAAAGGAAGAGCTCCCTGCACAAGTGCACCCTGTACCGAAGGAGGGAACGGTTGAGGAAGAAGCATATGTGGTGCAAGCGATTCCCGGCGATAGTTTGCGGGCCAGTGAGGTGAACAACTGCAGCCCAACAACGTACGACGAGCGTCTGTATCACGCATCGCATGCGATCATCAACGACGGTACGAGCTACCAGCAAACCCTCGTCGCTGGCATGGAACCACCGGTCCCGGTAGCGTCGAACGAACCCTCTGTCGATTTCTCCGACTACGAAGCGCGCATGAATGCGGCAATCGATGCGATACTGCACGACGGCATCAGCTTTCGCGTCGCCTCCCACAGGTACCAGATCGCCAAGACGGTCTTGTGGCGCAAAACGATCAAGCTGCCCCGACCGACCGGCACCCGGCCGGCGGTACCGCTGCTCGGCGCCCGCCGAATCGAAGCGATCGATGCGCTCAAGGCGGGCGAAAAGCTGGTGAACGTTAGCCGGCGGTTCGACATCCCCCTGTCGACGTTGCACCGCGACAAGCTGCGACTGTACAGCAGTGGCGTGCTGCCGGGCGAGGTGACGCTGAAGCAGCGCGACAAGGGTGAACCGTTCAAGCATCGGCTTGTGGAGGCCGCGAACGAGTGCGTTGCGGGCCGGATGTCCCTGTCGGAGGCGGCGCGAGTGTACGCGCTGCCGAAAACGTCCATCTGGCGGAAGGTACGCGGAGTGCAGGCAAGCGCCACCGACTGGGAGGAATTGGGCAGTGGGGAGCTGGCGAGGGATCCAGCTAGTCAGGGAGCGGTGGAAGCCAGCGAACGAGCGCTGGGAGACGTTTTGGACGGTGGTCAGGTGATGCATGAGATGACCGATTTGGCACAACTAAAGATTGATCTGACCGCATCACTCACTCAGTTACTGAATGATGATTTGTAG
- Protein Sequence
- MALTTASDKSSVRWIGFQQHVRSTFHDIFAASQFPDCRLVVADGGELLANCTVLGMASSLFGTIFSGTAVTHLPVTVLIPDLTLPAVRLVLQFIYTGVVNLRPFEVASFIEACGLLQIRGIQFIGDRVVGIQFVKSLDLDVETESTGEVTTSTEQPDVAEAIDDRTEQEIGPKEELPAQVHPVPKEGTVEEEAYVVQAIPGDSLRASEVNNCSPTTYDERLYHASHAIINDGTSYQQTLVAGMEPPVPVASNEPSVDFSDYEARMNAAIDAILHDGISFRVASHRYQIAKTVLWRKTIKLPRPTGTRPAVPLLGARRIEAIDALKAGEKLVNVSRRFDIPLSTLHRDKLRLYSSGVLPGEVTLKQRDKGEPFKHRLVEAANECVAGRMSLSEAARVYALPKTSIWRKVRGVQASATDWEELGSGELARDPASQGAVEASERALGDVLDGGQVMHEMTDLAQLKIDLTASLTQLLNDDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00099124;
- 90% Identity
- iTF_00099124;
- 80% Identity
- iTF_00099124;