Adir004542.1
Basic Information
- Insect
- Anopheles dirus
- Gene Symbol
- -
- Assembly
- GCA_000349145.1
- Location
- KB672490.1:10258997-10261251[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 4.1e-06 0.0056 15.8 0.0 5 36 235 266 234 269 0.92 2 5 0.13 1.7e+02 1.5 0.0 11 38 341 368 332 374 0.78 3 5 0.0053 7.2 5.9 0.0 7 36 425 454 421 458 0.74 4 5 4.9e-06 0.0067 15.6 0.0 7 39 529 562 527 566 0.87 5 5 7.8e-12 1.1e-08 34.2 0.1 2 35 622 655 621 660 0.89
Sequence Information
- Coding Sequence
- ATGGAACAGCTTTCCAGCCAACCGGCTAGGCAGATGTTGACTTGGTTTGACTATAAGCAGCACATGCAGAGCACGCTGAGGTGCACCTTCGACCGCTCCCAGTTCACCGACTGTCGGCTGATCGTGTCCGGCGGGGAAGTGTACGCCAACCGTGCCGTTCTCGGTATGGCGTCCGGCTTCCTGGAGAATGTCCTCTCCAGCACGTCCAGCCTGCCCACAGCGGCAGAAATAACAACGCTGCTCATACCCGATCTCACGTACTCCACGCTGCAGCTGATTATCCACTTCATCTACACCGGCAAGGTGTCGCTCCGATCGACGGAAATGGTGCCGTTCATGGAGGCGTGCAATATACTGCGGATCCGCGGCGTCGAGTGCTACAATAATCTGGTGATGGGTATTTGCATTGAAAGTACGGACATTGTGAAGGAACCGATACCTACGGATTCGGTGGCGATGTCGAGCGACCCGAGATCTCCCGCTCCGTCGATGGACCAAACCGCGGAGGATGTGCAAATGGCGTCGAGCGAAGACCCGCCGGAAACGATGCCACTGGATGAGGTGTACATTAAGGTGGAGCCGAAAGAAGAGCCGGAGGTACTGGAACAGCATGACCCATTCCAGATGGAAGAAGCTTCCACGAGCCACGCCGACAGATCGTTAAAGGCAGTGGGAGAGAAGCCCACACCGTACGCCGTCTGTCTGTCACAGGCGATCGATGCGGTGCTGAACACCCGTATGAGCTTCGAAGAAGCGTCGTTCCAGTACAAGGTGTCGCGAAGCATGCTGTGGCGCTGGACGCGGAAAGTGAAGTGTGCCATCGCACAGTCCAAAGCACCCGATGACACCGTACCGCAATCACCAGCCGTCGTCACAGCAACGATCGAGAGCGTGTTGGAGCAAAGCAAGCGCGAGGTGAACGACATTCTGGATGGGGATGATGAGAGCGCGAAGTTGGCCATGTTGGATAAGTCGATGCTTACGATTACCCACGACGCACGCATCATGGCCGCCCACGACGAAATTCTCCGGAAGGGAGTGAAAGTTTGTGTGGCAAGCGAGCGATACAACGTGTACCGGCCAGTGTTAAGCAAGCGCCTCAACAATCTTGTGCATTACGGTCCGTACACGGAACCGACCCGCGCACGAAAACCCGTCCGCCGCAAACCGAACCAGCGCAAAGCAAAGACACCCCCGGCAGCCCCGCCTAAAAGGGtacataacaaaatattgcaGTGTATCTACACGCCAGAGTTCCTTGGCCGCCTGAAACAAGCGCTCCTGGCGGTCTTCATCGACGGCATGCGGAATGCAGTTGCAGCCCGAACGTACAATATCAACCGCAAGAGTTTGCTTAATCACGCGTCCAAAGTGGCTCTGCGTATACGCATGAAAAAAGCAGACGATTCACGCAACAGCGCGGAACAGGCGGAAGCTGTGATCGAAATGCTGCTGGCCGAATATGCAAAACCCAATCTTCCGGCCATGAGCACCGCGGCTGTGCCAGTTGTTCCAAAGCTACAGCGATCGGAcatgctgctgcggcggctaCACGATCCGTCGACGTACGATCTGCTTGTGAAGAAGGCGATCCGTGCGGTCACTACGGGTCAGTTAAACTATTCGGAAGCGTCGAAATTTTTCCGACTGCCTAAGAGCAGCATCTGGAACAGTGTTCAGAAATCGAAAAACAGTTCGCCACTGGCAACCGAACACGCACCCGCACCGGCTATGCCGATGATTCCGATGCTGAAGCCAATCTCACCAACGGCAGACCTGCACCGGGAGGAAAGCGCCGGGGACGTTGCACCACCCGCCGACGTACCGCTGCCGGAGATGCCGGAATTGATTCCCTTCAGCTTGGACGAACGGTTGGCGGTTGCGGTTAAGGCGATCGCTGAGCGGGGCATGAGCTACCGGGAGGCATCGACGCGGTACGACATCCCCAAGGCGACCTTGTGGCGAAAGATGAGCGAACAGAAATGA
- Protein Sequence
- MEQLSSQPARQMLTWFDYKQHMQSTLRCTFDRSQFTDCRLIVSGGEVYANRAVLGMASGFLENVLSSTSSLPTAAEITTLLIPDLTYSTLQLIIHFIYTGKVSLRSTEMVPFMEACNILRIRGVECYNNLVMGICIESTDIVKEPIPTDSVAMSSDPRSPAPSMDQTAEDVQMASSEDPPETMPLDEVYIKVEPKEEPEVLEQHDPFQMEEASTSHADRSLKAVGEKPTPYAVCLSQAIDAVLNTRMSFEEASFQYKVSRSMLWRWTRKVKCAIAQSKAPDDTVPQSPAVVTATIESVLEQSKREVNDILDGDDESAKLAMLDKSMLTITHDARIMAAHDEILRKGVKVCVASERYNVYRPVLSKRLNNLVHYGPYTEPTRARKPVRRKPNQRKAKTPPAAPPKRVHNKILQCIYTPEFLGRLKQALLAVFIDGMRNAVAARTYNINRKSLLNHASKVALRIRMKKADDSRNSAEQAEAVIEMLLAEYAKPNLPAMSTAAVPVVPKLQRSDMLLRRLHDPSTYDLLVKKAIRAVTTGQLNYSEASKFFRLPKSSIWNSVQKSKNSSPLATEHAPAPAMPMIPMLKPISPTADLHREESAGDVAPPADVPLPEMPELIPFSLDERLAVAVKAIAERGMSYREASTRYDIPKATLWRKMSEQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00099115;
- 90% Identity
- iTF_00099115;
- 80% Identity
- iTF_00099115;