Basic Information

Gene Symbol
Xbp1
Assembly
GCA_000349145.1
Location
KB672846.1:1933812-1935043[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.5e-14 1.6e-11 43.5 10.1 2 62 76 136 76 139 0.94
2 2 1 6.6e+02 -0.1 2.5 28 53 137 159 134 166 0.64

Sequence Information

Coding Sequence
ATGGCAACACCAATCTTCATCACCGTACCGACCAAGTACATCCCAATTAACGTGGCCCCAGCGGCGACGGTCGTGGCAAAACCGTCGGCAATCAAGCCACTGGTGGCCAAGCGGCCATCACCGCCTCCCTCGTCTGTGGCCTCGGACGAGGAGGAGTCATCCTCGATGGATGAGTTCATCGTGCGCGGGGCGGGCAAGAAGCGTCGCCTCGATCATCTCACCTGGGAGGAGAAGATCCAGCGGAAGAAGCTGAAGAATCGTGTCGCCGCCCAGACGTCGCGCGATCGCAAGAAGGCCAAAATggaggaaatggaaagcacGATCCAGGAGCAGTCGGAACAGATCGAACAGCTCCAGCACCGGTGCGCCGCACTCGACACGGAGAAGAACGCCATCTACGACAAGTATCTCAATCTCGAGCGACGCTTCGAGGACTTGCAGAAGCGCCTGGAGGCACAGGAGCAGAAGGTGAAGGAGGAACCGCAGGAGGAGATGGAGAACGGAGgagaaaccaccaccacgacggcCGCCACCAACGCTGGCGGCAGTGTGGGTTGCGTTACTGCCGGGCGTACGACCACGGGATCAGCAGCATCCCCACGATGCCCTCAGCAGCAGGGACTGTACAAGTGCGGTCCGGCGGAAGCGCAAACGACACTGCCCCCAGCACCGGTGGCGAACGACCCGCGGCTGGCGGCCCTCTGGAGGATCATTGCCCTCTGCCTGCTCTACAGGACCTGTTCGAAGATTTCGACGTGtcccagctcgagcagcttgCCGAGAGCCTGCTCGCCGGTGTCGACGCAGACCTGGCGCTCGCTGATCACGCAGGCCGCCCGGCTGATGCCGAAGGCGACCGCCCCGGCCAGTGCCTGCCTGGATCAGTGGTGGGGCCCGCAGCAGAACTCCTGGAATCCGGTCGACCGGCGACCGATCAGGGGGAAAGCCGCCTAA
Protein Sequence
MATPIFITVPTKYIPINVAPAATVVAKPSAIKPLVAKRPSPPPSSVASDEEESSSMDEFIVRGAGKKRRLDHLTWEEKIQRKKLKNRVAAQTSRDRKKAKMEEMESTIQEQSEQIEQLQHRCAALDTEKNAIYDKYLNLERRFEDLQKRLEAQEQKVKEEPQEEMENGGETTTTTAATNAGGSVGCVTAGRTTTGSAASPRCPQQQGLYKCGPAEAQTTLPPAPVANDPRLAALWRIIALCLLYRTCSKISTCPSSSSLPRACSPVSTQTWRSLITQAARLMPKATAPASACLDQWWGPQQNSWNPVDRRPIRGKAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-