Adar007328.1
Basic Information
- Insect
- Anopheles darlingi
- Gene Symbol
- ttk
- Assembly
- GCA_000211455.3
- Location
- scaffold:11849-33943[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4 6.3e+03 -3.7 0.1 14 24 257 267 257 267 0.87 2 2 1.3e-17 3.5e-14 51.5 0.0 2 45 680 724 679 724 0.95
Sequence Information
- Coding Sequence
- ATGATGTCTGTTCAGCAGTACTGTTTACGGTGGAACAACCATCAACCGAACTTCATCTCGGTCTTCTCGACGCTCCTGCACAATGAGAGCCTGGTCGATGTTACGCTGGCCGCCGAAGGACGACAGCTGCAGGCGCACAAGGTCGTCCTTTCGGCGTGCAGCTCCTACTTTCAGTCACTGTTCACCGCCAATCCCTGCCAACATCCGATCGTGATACTGAAGGACGTACAGTACAACGATCTGAAGACGATGGTCGACTTTATGTACTACGGCGAGGTGAACGTGTCGACGGAGCAGCTACCGCAGGTGCTAAAGACGGCCGAAATGCTGAAGATCAAGGGCCTTGCGGAGATGCCCGATGCGTCGGCCGTCTGCAAAGCGGACCTGAGCAAGCTGGATCCCTCCGATTTGATTCAGGGCACCAACGTGGTAACCGGTGCGACCGGCGAAGCGATATGGGCCAGCGCGgaatctcaacagcaagcgcaacagcagcagcaacaacaacagcaacagcagcaacaacagcagcagcagcagcagcaacaacaacaacaagcacaacatcatcaacagcaagcgcaacaacagcagtatcaccatcagcagcaacagcaacaacaacagcaacaacagcagcagcaacaacagcaacagcaacagcaacagcaattacatcaacaaccgcaactgcgacgttctccttcacccaccacgaatatgtcgccggcggcgcgaagaaagcggttacgaaagacttcgaccggttctggttccctgtctaccgagcgactcgcccagcaacagcagcaacagcaacagcagcaagccgccgctgcagcagccgctcagcaacaagcagcggccgttgcagcggccgcagcagcggcagccgctgcccaacagcagcagcaacagcaacaaTCAGATGAGCATGGTACCAATACCGATGGTACGCTCAATCTGGTACCGCACCTGCACATCCAGCAGCAGGTGGACAACATATCGTACAGTACGGGGCATGGCACGCTAGCGTTGGGTGCGGCCACTGCTGCGGCTGCTGCAGCAGCGGCCGCGGCAGCCGCCGCTGCCGGTAACAACATCCGCATCATCAAGGAGAGCCCCAGCTCGGACGTGGATCAGCAGCAGCACGAGTCATCGCAGGAAAGCGTCGACGAGACGGGACACCACATGCCCAGCATCATCAAAACGGAGGACCTAAGCGGCGTCACGCAAACCATACCGATGGACATTACGACTACACCAACAACCGTGAACATAACGCAGTCTCAAACGCAACACACCGGTGGGCAATGGACGGTAATCGATACGAATTATCCGCGGTTTGGCATTGCGTCCTGTCAGACGAATTTAGGACTgcagcagcagcagcaacagcagcagcaacaacagcagcaccagcaacagcaacagcatcagcagcaagtacagcaggccgtgcaacagcagcaacagcaacaacatcatcagcagcagcaagcgacccagcaacaccatcagcagGCGGATAGTTTAGGTGGCCAGGCTAGTGCCGGAAGTGGGGCCAATGGAGCAGGCAATGGTACGGGCGGTGTCAATAACGGGGCGACGAATGCAATCACGAACGCGGCAGCCGCGAACTCGAACGCCACGACACCACAACCGACGACTCCTGTGCAAATCTATCAGCAACACCCCTTCTCACCGCAGATCATCTCGGTGAACCCGAACAGCATGGTTAACAGCTATCAGACGGCCAACATCTCTACTCCCACTTCACCGCAGGCTGGTACGGAAACGGGCCTCGTGTACAGTACCGGCACACCGAACCAATCGCCCCTCGGTGCTACGACCAGCGCCGTCGTCGTGGCCGCTCAGCAGCAACAAGCGCAGACAGGCAATGGACCAACCGGAGCAACGGGCGCAGGTACGGGCAATGGTGCAGGCACGACGGGAGCAAATGCGGCAGGTAATGTGGCCACCACCGGAACCGTAGTGCAGCCGGTCAAGCGGAAACGCTCCGTCAATCCGCAGGGCGATGAAAACTTTCTGCGAGCGCTCGAAGCGGTACGGTTCGGTGGTATTGGGTTCTGCAAAGCGGCCCGCCTGTACGGCGTCAACAATCGGACACTGTGGCTTGAGTACAAGAAGCGGGGTTACCCGATCAGCCGACCGAGCATTAAGAATCGCATCAAGCTAGAACCGAACATATCGCCACCACCGACGGCAACCACACCGCCAGGCGATGAAAACGCTTCAATGGAGCACTACGATACGGCTCTATCCTCTCCGGCACTCAACATGTCCCTgcagcaacaacaacaagcccagcagcaagctcaacaacaagtccagcaacagcaacaacagcagcagcaacagcagcagcaacaaacaacacagcaacaggtgactgctgtccagcaacagcaaacgcagcaacagcatcaacaacaacaagcccagcaacagcagcagcaaggaaacgacacgacgaatgtggcagcagcagcagcagcggccgccgctgcagtcgcTGCTTCGTCTACCCCGCTCATGTGCCCACCGCACGGCCATCCGATGGGTGTGATGGGTTTCCTCGATACCCGGCACGTCGACTTCACCACGGCAGCCGGTATCCATCAGATGACGCGCCAACGTTACCCGGACACCACGACGGTCAACATGAACGCCGGTGCGGTCAATCTGCAGGGTCTCAATTTTAACTCCATGTAA
- Protein Sequence
- MMSVQQYCLRWNNHQPNFISVFSTLLHNESLVDVTLAAEGRQLQAHKVVLSACSSYFQSLFTANPCQHPIVILKDVQYNDLKTMVDFMYYGEVNVSTEQLPQVLKTAEMLKIKGLAEMPDASAVCKADLSKLDPSDLIQGTNVVTGATGEAIWASAESQQQAQQQQQQQQQQQQQQQQQQQQQQQQAQHHQQQAQQQQYHHQQQQQQQQQQQQQQQQQQQQQQQLHQQPQLRRSPSPTTNMSPAARRKRLRKTSTGSGSLSTERLAQQQQQQQQQQAAAAAAAQQQAAAVAAAAAAAAAAQQQQQQQQSDEHGTNTDGTLNLVPHLHIQQQVDNISYSTGHGTLALGAATAAAAAAAAAAAAAAGNNIRIIKESPSSDVDQQQHESSQESVDETGHHMPSIIKTEDLSGVTQTIPMDITTTPTTVNITQSQTQHTGGQWTVIDTNYPRFGIASCQTNLGLQQQQQQQQQQQQHQQQQQHQQQVQQAVQQQQQQQHHQQQQATQQHHQQADSLGGQASAGSGANGAGNGTGGVNNGATNAITNAAAANSNATTPQPTTPVQIYQQHPFSPQIISVNPNSMVNSYQTANISTPTSPQAGTETGLVYSTGTPNQSPLGATTSAVVVAAQQQQAQTGNGPTGATGAGTGNGAGTTGANAAGNVATTGTVVQPVKRKRSVNPQGDENFLRALEAVRFGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKNRIKLEPNISPPPTATTPPGDENASMEHYDTALSSPALNMSLQQQQQAQQQAQQQVQQQQQQQQQQQQQQTTQQQVTAVQQQQTQQQHQQQQAQQQQQQGNDTTNVAAAAAAAAAAVAASSTPLMCPPHGHPMGVMGFLDTRHVDFTTAAGIHQMTRQRYPDTTTVNMNAGAVNLQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00105905;
- 90% Identity
- iTF_00098468;
- 80% Identity
- iTF_00098468;