Basic Information

Insect: Anopheles culicifacies
Gene Symbol: -
Assembly: GCA_000473375.1
Location: AXCM01005993:5434-7190[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 3.6e-05 0.0021 18.1 0.1 1 23 70 92 70 92 0.97

2 8 8.4e-05 0.0049 17.0 1.7 1 23 98 120 98 120 0.96

3 8 0.54 31 5.0 0.9 1 23 166 187 166 187 0.90

4 8 3.4e-05 0.002 18.2 1.4 1 21 199 219 199 220 0.94

5 8 1.5e-06 8.9e-05 22.4 0.6 2 23 392 414 391 414 0.96

6 8 4.2e-06 0.00024 21.1 0.5 1 23 420 442 420 442 0.99

7 8 0.0021 0.12 12.5 0.4 1 23 448 470 448 470 0.93

8 8 2 1.2e+02 3.2 0.1 2 23 476 498 475 498 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	3.6e-05	0.0021	18.1	0.1	1	23	70	92	70	92	0.97
2	8	8.4e-05	0.0049	17.0	1.7	1	23	98	120	98	120	0.96
3	8	0.54	31	5.0	0.9	1	23	166	187	166	187	0.90
4	8	3.4e-05	0.002	18.2	1.4	1	21	199	219	199	220	0.94
5	8	1.5e-06	8.9e-05	22.4	0.6	2	23	392	414	391	414	0.96
6	8	4.2e-06	0.00024	21.1	0.5	1	23	420	442	420	442	0.99
7	8	0.0021	0.12	12.5	0.4	1	23	448	470	448	470	0.93
8	8	2	1.2e+02	3.2	0.1	2	23	476	498	475	498	0.94

Sequence Information

Coding Sequence: ATGGAGACGGACACGGCAAACGAGGCGAATAGGAAACTCCCTGCGTACTACTATCTGCAACCATCCAAAAATGGTGACGAAGAAGCGGAGGAGGAATTGTACGATTCCAATGGGACGCACATTACATCCGACTATCTAAACGATATTGTCGCCGAATCCATGTCCGACAAGTACACCGTCGTACAGGACGCTTCCGACACCCCACAGTATAAGTGTAACGAGTGCGATAAGATTCTTGCCAACACTGGCCACCTGATAGCGCACATTGTGGTTCACACGGGCGAAACCCCATATTTGTGCAGCCTATGCCAACGGTCGTTTGCAAACTCAACACGACTCAAGTTGCATCTGAAAACGCACTGCATTAAGAAGTTGCACCCAGGATTGACGGTGACGAGAATTACGAAGAATGCCCCAGTGTCTGCTTCCGCTTCTCCCAGCACCAGCATAGTGGAAAATGTGGAACAAAGTCCAACGACCGTAAAGCCAGCCACGTTTCGTTGCATTGAGTGTGAGCAGACACTGCCCAAGGATACGCTCTATCGGCATATGAAACAGCATCTGCAGGAGAAGAACATTTTTGCACAGAAAACACACAAATGTACCCATTGCGGGGAGACGTTTGCTAAGGTATCAACACTACAGCAACACCAGGAATCGTGTAACGCGTCATCCATAAAGGTAACGTCGGAGGTGGATCTTGTACCGATTAGCAAGCAAGAAGCGGGCTCTAGCTTTAAAAAGCAAATCGAATCCAATCCCATCCTATCGGGACTGCTAATGAAGGAATCCCAGGAACCACCAATCTCCATTACCACCATAGAAGTCGATCATCAAGAGTCAGACGTGCTGGTTGATGATACGCCAGCAAATGTTGGAGAGAAGGCTCCTACAGAGGAGACGCAGGATCATGTCGAAGTGCAAATAGAGTCAAAACAACCGGAAGAAGCGAATGTACCATCGGAAGATGATGATAGTGTGGTACCAAACTCCTCCACAGGATTTGTTATCAGTTCGGTAGCAACGGTAGATCAGCAATTTCTCGAAAATCTTGCCCAAATGGAACTGCAGGCACGAACACCGGAACTGGAAGAAATGCCTCCCGACGATTCAGGCACCCTAGCCGCTTCACAGCCCGGATCACTGCCTGGATTCAATCCGGCAACACCGACTACCTGTGGTTTGTGCGGTAAATCGTTTAGTGAAAAATTTGGCCTCCGGCAGCATATGCGCATCATGCACGCGGACACCAAACCGTTCAAATGCCCGGAATGTAGGAAGCGGTTCGCCAAAGAGAACTCCCTCCTGATCCATCTGCGCGTGCACACAAGCAATCGGCCCTTCATGTGTATCGTGTGTTACAAAACGTTCACCCGCGCCACTGCACTGAACGGCCATTTGTCCTCCCATTCGCACGATGCACTCAAGTGTTTCTCCTGCGAACAGACACTACCGAACGTGCAGAAATACGCGAACCACATCGAGGTAGCTCATCCCCAGTTCCCGGAGGTGTTGTACCGGATACGGGCGGAAAAGCCAGAACACGAACGGATCAAACTGTTGCGTCGGTTGTTACTGCAACATCAACCCACTGCATCGTCGACGCACGACACATGA
Protein Sequence: METDTANEANRKLPAYYYLQPSKNGDEEAEEELYDSNGTHITSDYLNDIVAESMSDKYTVVQDASDTPQYKCNECDKILANTGHLIAHIVVHTGETPYLCSLCQRSFANSTRLKLHLKTHCIKKLHPGLTVTRITKNAPVSASASPSTSIVENVEQSPTTVKPATFRCIECEQTLPKDTLYRHMKQHLQEKNIFAQKTHKCTHCGETFAKVSTLQQHQESCNASSIKVTSEVDLVPISKQEAGSSFKKQIESNPILSGLLMKESQEPPISITTIEVDHQESDVLVDDTPANVGEKAPTEETQDHVEVQIESKQPEEANVPSEDDDSVVPNSSTGFVISSVATVDQQFLENLAQMELQARTPELEEMPPDDSGTLAASQPGSLPGFNPATPTTCGLCGKSFSEKFGLRQHMRIMHADTKPFKCPECRKRFAKENSLLIHLRVHTSNRPFMCIVCYKTFTRATALNGHLSSHSHDALKCFSCEQTLPNVQKYANHIEVAHPQFPEVLYRIRAEKPEHERIKLLRRLLLQHQPTASSTHDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00101899;
90% Identity: -
80% Identity: -