Acul005729.1
Basic Information
- Insect
- Anopheles culicifacies
- Gene Symbol
- Zfy2
- Assembly
- GCA_000473375.1
- Location
- AXCM01000793:12811-24276[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 1.1e+02 3.2 0.3 3 23 257 278 257 278 0.96 2 19 4.5 2.6e+02 2.1 0.4 6 23 287 304 287 304 0.91 3 19 0.00044 0.026 14.7 0.2 2 23 309 330 308 330 0.93 4 19 0.0086 0.5 10.6 9.2 1 23 338 360 338 360 0.99 5 19 0.0061 0.36 11.1 0.1 2 23 364 386 363 386 0.96 6 19 0.014 0.8 10.0 0.7 3 23 394 414 392 414 0.95 7 19 0.02 1.2 9.4 0.9 2 23 424 446 423 446 0.96 8 19 0.16 9.6 6.6 1.4 2 23 453 475 452 475 0.92 9 19 9e-05 0.0052 16.9 0.7 1 23 481 503 481 503 0.98 10 19 0.0015 0.085 13.0 1.5 1 23 509 532 509 532 0.97 11 19 4 2.3e+02 2.2 0.1 6 23 804 821 804 821 0.93 12 19 7.4e-05 0.0043 17.1 1.3 2 23 826 848 825 848 0.95 13 19 0.0012 0.068 13.3 1.3 1 23 856 878 856 878 0.96 14 19 0.00031 0.018 15.2 1.1 2 23 882 904 881 904 0.93 15 19 7e-06 0.00041 20.3 0.5 1 23 910 932 910 932 0.96 16 19 0.0014 0.079 13.2 4.4 2 23 942 964 941 964 0.94 17 19 0.012 0.69 10.2 0.5 1 23 971 994 971 994 0.96 18 19 6.2e-08 3.6e-06 26.8 0.7 1 23 999 1021 999 1021 0.98 19 19 0.019 1.1 9.6 2.5 1 23 1027 1051 1027 1051 0.96
Sequence Information
- Coding Sequence
- ATGTTTGTTCATCGAACCCTGCACAACAATAACAAACAGCTGTCAAACAATTGTCAGCGCTGTTGTTGTTGGTACTTGCCCAAGCTCCAAACAAGCCAGGAATGCGTTTTATTGGTTTTATTCATTTTCACAATGAGTAGCGTAGACGAAGTTTGTCGCCTTTGTTTGCGTACATTTGCCCGAGTTGCCAGAGGAAGAATCGCCATCACAAATGAAGTGTTTCAGCCAAAGTTGCAAGCGGTATTTCCGTTTCCCATATTACCAACGGAAACCCTTCCGAGTGATGCCTGCCGTGGATGCCGTGTGATGGTAGAACAATTTTTCGAATACAGTGAAAAGGTCCGATCCAATCAGGCAGATTTAGATGCGGCATTGCCAAACAATGATGAACCCGATTCAGTTGAAGAGGTTAAAGCGGAATTTACCGATACGGCTGCAAGAACACTTTCGGTTGAGACTGACTCCGTCGCGTCCAACGAACATTTACACATCGAACTGCTGAAAGTGGAACCTTTGGTGCAAAGTGCACAACGGGAAGAAAATGCCGAAACAGAGCTCTCAGAACATTTAATTAAATCGGAATCAAACGAAAGTTTGGACGATGATTTCGACGATAATCAAGTTGATGCGCTAACAATGTCCCCGAACGAACAGCCCTGGGACAGTCCGCGTAGGAAGGAACGGAAAGCTCTGGAACCGGTTGCAAGGAAAAAGAAAAGACCCCGAGCTGAGGACGAAATACTGTTGCGCGAACATTTCCATCTTGGGTGTGAAATGTGCACGTTTATGTCAGACACGGTTCCCGATCTCTTTCAGCATTATCGCCAGGAGCACAAAACCGCGGGTTACATTCAGTGCTGCAATCGAAAGTTCTTTCGGCGTGCGCGTTTACTAGAACATCTCGGAGCGCACCTGGGTTCGATAGTGTGCGACATCTGCGGCAAAGTGTTCCGGAATACCTTCTCGCTCGATCTACACAAACTAGACCATGAAGCACCGGATGCGAGACAGTTCAAGTGTGACCAGTGCAGTTTTTCGTTCCACAAACTGTATCATCTGAAGCAGCACCAAAAGCGTCACGAGCGCGTACGCTGCACTATCTGCGATAAGGTGCTGGCGGGTGAGAACGGACTGAAAGGGCATATGCAGAAGATGCACGGAAACGACAACAAACAGATCTGCCCAACCTGTGGGAAAGAGTTTCGTTGCAGTTTGGCGATGGAACGGCACATTAAGGCACACTTGGGCCTTTTAAAGATCGAACGTGTGCAATGTGACCGGTGTGATAAGTGGTTCGGCAGTAAGCTTAACCTCCGGAATCACTTCAAGCGCGTGCATGACGAAGCGGGACCGATTCAGTGTGACGAATGTCAGCACGTAAGTCCCAATCGGAGGGCGCTTCACAATCACAAGGTACGTGCGCATGGCCAgaaacaatcgtacgagtgtgagtactgcggcaagaaactcaacacgaagctcacactgaaggaacacttgtctatacacacgaatattccgctctactcgtgcgagttttgcggcaTCACTTTCAATTCCAACGCGAACAAGTATGTCCATCGTAAGAGCAAACATCCGAAAGAATGGGAGGCTCAAAAGCAACAGAAGCTGTTGAAAAGAATGAGTGCGCCCCGGCGGCCGCTTGCAAACAATGGTGTTCGTCGTAAAAAGCTGTGCACCACAACAGTATCCAAGCGTAAAATGAATGAAAAATGCCGCCTCTGTCTCGGAAATGTATCGAACGAAACGCAAATATCTATACGGGATGCCGCCTTTCACGTGGAATTGAAAAATGTGTTCCATTTTGAGATCGGGCACGACCTGCAACTGCCGCAATACGTGTGCGGTGAATGCAGAGGAACGGTAGCATACATCGACTCATACTGTCAGCAGGTGCAAAACAATCAGGCGCAGCTGATCGGCCAAGCAAAGGAATGCATTCTTCAACCGGTGGAAAATGTAAAAGTGGAATCCCTTCACGATGCTGACTGTTTCGAAGCGGAAGAAAACAATTCAAAAAATGAGCCTAAATTTGGTCGGGATATTCAAACAGCTGTACCGGATAGAACGGTTGGTTCTAATGATGAGAAAGCAGTGAAACAAGCGACAAGGAAAGTTGCAAACTGTGTGGATAAACACAGAACAGGACAAGAAAAATCGTGGCGACGGGATCGCCGAAATATTAGAGAAAAAATAATCATAAGCAGAGAAAATACAGAGCAGGACAGCTCGACGCTAAATGGCCATTCAAAGCAGCTAGAAAATGATCAACTTATAAAAGACTTCTTCACCCTTGAGTGTGAGATCTGTTCTGCACCATTGGAAAGCTTCGTAATGCTGCTGGACCATTATCGGTGTGCACACGATACGAGGGGCTACGTACGCTGCTGTGGTAAGCAATTCTTTCGTCGCTACATACTAGTGGACCATATTGCAGCACACCGTGGGTCAACTCGTTGTGAAATTTGCCAGAAAACGTACAAAACCAAACGCTATCTTATGCTGCATATAGCCAAAAGTCATAGCAGCGAAGAGGAACGACCATTCAAATGTGCCAAGTGTCACATTTCCTATCCCAAACAGTACTTGCTTCGAGCACACGAGCTGCTACACGTCCAGCAACAGTGCCACATTTGCCAGAAGGTGCTCTCGAACAACCAGTCGCTTAAGGTACATCTCGCCCAAATGCACAGTGATGATGGAAATCACATTTGTGACACGTGCGGCAAGGTGTTTCGCACCAAACCGGCCATGGAACGGCACATCAACGAGCATCAAGGGTTGGATGTGGTCGAGCGACTGCAATGCGAGCACTGCCATAAGTGGTTCAGCGGCAAGTACAATCTGAACAAGCATGTACGCTTTCTGCACATGCAAGATGGGCAAGTGTTTCGGTGCGATGTTTGCCAACATGTTAGTCCGAATAGTCGCGCCCTAGCGAATCACAAGCTGCGGATACACGTGGAGGAAAGATTTGAATGTGAGTACTGCGGGAAACGGTTCAAGCGAAGACCGAACTTGCGGGAGCACATTGCAACACACACGAACGTTCCGTTGTATTCGTGTGAAATCTGCGAGAATCGTACATTCAATTCGAAGGCGAATTATTTTACACATCGGAAAAACAAACACCCCCAGGAATGGGAAGCACGTCTTGACAGCTATAGTTGA
- Protein Sequence
- MFVHRTLHNNNKQLSNNCQRCCCWYLPKLQTSQECVLLVLFIFTMSSVDEVCRLCLRTFARVARGRIAITNEVFQPKLQAVFPFPILPTETLPSDACRGCRVMVEQFFEYSEKVRSNQADLDAALPNNDEPDSVEEVKAEFTDTAARTLSVETDSVASNEHLHIELLKVEPLVQSAQREENAETELSEHLIKSESNESLDDDFDDNQVDALTMSPNEQPWDSPRRKERKALEPVARKKKRPRAEDEILLREHFHLGCEMCTFMSDTVPDLFQHYRQEHKTAGYIQCCNRKFFRRARLLEHLGAHLGSIVCDICGKVFRNTFSLDLHKLDHEAPDARQFKCDQCSFSFHKLYHLKQHQKRHERVRCTICDKVLAGENGLKGHMQKMHGNDNKQICPTCGKEFRCSLAMERHIKAHLGLLKIERVQCDRCDKWFGSKLNLRNHFKRVHDEAGPIQCDECQHVSPNRRALHNHKVRAHGQKQSYECEYCGKKLNTKLTLKEHLSIHTNIPLYSCEFCGITFNSNANKYVHRKSKHPKEWEAQKQQKLLKRMSAPRRPLANNGVRRKKLCTTTVSKRKMNEKCRLCLGNVSNETQISIRDAAFHVELKNVFHFEIGHDLQLPQYVCGECRGTVAYIDSYCQQVQNNQAQLIGQAKECILQPVENVKVESLHDADCFEAEENNSKNEPKFGRDIQTAVPDRTVGSNDEKAVKQATRKVANCVDKHRTGQEKSWRRDRRNIREKIIISRENTEQDSSTLNGHSKQLENDQLIKDFFTLECEICSAPLESFVMLLDHYRCAHDTRGYVRCCGKQFFRRYILVDHIAAHRGSTRCEICQKTYKTKRYLMLHIAKSHSSEEERPFKCAKCHISYPKQYLLRAHELLHVQQQCHICQKVLSNNQSLKVHLAQMHSDDGNHICDTCGKVFRTKPAMERHINEHQGLDVVERLQCEHCHKWFSGKYNLNKHVRFLHMQDGQVFRCDVCQHVSPNSRALANHKLRIHVEERFECEYCGKRFKRRPNLREHIATHTNVPLYSCEICENRTFNSKANYFTHRKNKHPQEWEARLDSYS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -