Basic Information

Gene Symbol
-
Assembly
GCA_000473375.1
Location
AXCM01009859:412-8693[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.2 12 6.3 8.5 1 23 838 861 838 861 0.96
2 26 0.0022 0.12 12.5 3.8 1 23 867 889 867 889 0.99
3 26 0.064 3.7 7.9 0.2 1 23 931 954 931 954 0.93
4 26 0.00075 0.044 14.0 1.0 2 23 962 983 961 983 0.96
5 26 0.0078 0.45 10.8 0.4 1 23 1020 1043 1020 1043 0.94
6 26 0.22 13 6.2 0.0 1 23 1056 1079 1056 1079 0.96
7 26 1.8e-05 0.001 19.1 1.0 1 23 1147 1169 1147 1169 0.99
8 26 8.8e-05 0.0051 16.9 1.0 1 23 1256 1278 1256 1278 0.98
9 26 0.00064 0.037 14.2 3.5 1 23 1285 1307 1285 1307 0.98
10 26 3.2e-05 0.0019 18.3 1.8 1 23 1319 1342 1319 1342 0.98
11 26 1.3e-05 0.00074 19.5 0.9 1 23 1397 1419 1397 1419 0.98
12 26 2.9 1.7e+02 2.7 0.1 1 23 1433 1456 1433 1456 0.87
13 26 0.35 20 5.6 2.0 1 23 1541 1563 1541 1563 0.98
14 26 0.00058 0.033 14.3 1.0 2 23 1592 1613 1591 1613 0.98
15 26 0.0041 0.24 11.6 5.1 2 23 1644 1665 1643 1666 0.94
16 26 0.00012 0.0068 16.5 5.3 1 23 1672 1694 1672 1694 0.98
17 26 0.00013 0.0073 16.4 0.2 1 23 1763 1785 1763 1785 0.99
18 26 0.18 10 6.5 11.3 2 23 1818 1839 1818 1840 0.95
19 26 0.065 3.8 7.9 7.6 1 23 1846 1868 1846 1869 0.95
20 26 0.00015 0.0089 16.1 0.8 1 23 1941 1963 1941 1963 0.98
21 26 0.00095 0.055 13.6 0.4 2 23 1998 2019 1997 2019 0.96
22 26 0.31 18 5.7 3.2 2 23 2235 2256 2234 2257 0.94
23 26 0.0065 0.38 11.0 5.8 1 23 2263 2286 2263 2286 0.96
24 26 0.0025 0.14 12.3 0.4 1 23 2302 2325 2302 2325 0.96
25 26 0.00088 0.051 13.7 1.5 1 23 2331 2353 2331 2353 0.96
26 26 0.11 6.6 7.1 2.6 1 20 2362 2381 2362 2383 0.89

Sequence Information

Coding Sequence
ATGACAACCGGCCTTGGGCATCATCATCATGGGGCACAAAATCCGTTGCAGGGTACGGCGGACGTTGTCGTCGGACCGAATGCGTTCGTTACGCACGGTTACGGCAATGAGACGGCAACGCAGGGTCACCAGCGCCGGATGATGCCGTCGGTCGGTGTGAATCAGTATGCCGGTAGCCGTGGTGTTGATACATCTGGTGCGAGCACTTCCGGGGCTTCCTACTTTCACGATCAGCTCGGTACGCATGCCCAGTCCGTGGTCGGAACAACGATGGGACACTTTGTCGGGGTGGAACAAACGAATGCTGGAACCTACGGAAGTGGAGGTGTGGTGACGGGTGGAATAGTCCCAGGCGGTGGTCGTACGGTTGGCCCAATGGTAGCGAGCCCAAATGCTGCTTCACCTACGGGAGTGGCTGGAATGGGAGGCGCAAATGCGTACGGTCATTCGGCAGGTACACCGACACATGTGGCTTCTTACATGCAGCAGGGTTCCCCTAGCGGCATGCAGCGTATGAACGACATGGGCACGATGCAAACATCCGTCGGTTCGACCGGTTCGATCGTTGCCCAGCAACAGCAACAGATGGTACCGGAACATCGTCGAGCGCAGTTGCCGATGCATTCCGATTTTGGATCCAATGCGTCCCGGTCCCCCTTCCAGACGGGAGTATCACTCCCCTCGTCGAGTCCCTGCATGGTAGATGCGGCCGCAGCGGTAACTGGACAGATGGCCTCCTGTTCGAAGCCTTCCGATATGGTCATGAATAATGATCCACTAAAGGCGGCAAACCAAATGCCAGTTATTGGCCAACAGCAGACAAGAGCATCCCAAATGTACGGTCTGCAGGGAGCTGCTCCGATGGAAGTTTCGTTGGAGTCGGAATTTACCTTTCCGGGGGTGGACCAAAGCGCTACAGATGGCGTacaacaacaacaccagcaacaacaacaacaaTCACTTTCGTTAGCCCTTGGTGGTAATGGTCCAGCACCAGTTGCCCGGACGGATCCTCCCAACGAACGTATCACACGCTCTGCTACTGCGAATAGCCGTGCCGCTGCCCGTTTGGCAGAGGAAGCTTCCGAGGATTCGGAAGCCCTTGAAGAGGTAATTCCATCAGATCCACTTGCAACCAACGACCTCAATTCGGTGCTGGACAGTAAAATGCTACAAGGAAATAGCTCGACCAAATCAAACAGCATGTTGGCCCAGTCGAGTGGCATCAACGATGGACAGCTTGCACCGGCGATGGTCCTTTCGCAAACAACCGACCAGCCACGGAAGCGTTCCGTCAAGCATGTGCGCTTTATGGAACCGACCGAGGACAACTCCTTCGATGGTATGCAACAATCGCGCGTCAACGTAGTTTCGCCGCATCCACTCGGACTTGACCACCGTGATGAGGAGGAGGGGCAGGAAGAAGAAGAAGATGATGATATGGATGGGCTTTCGTTGATGCAGAATCTGCCACCGGTCGAGAGCCTGTTGGTGGAAATGGATGAAACCCTGGACGATGGTGATGATAACGATGATGAGGAGGTGGAAATGGAAGATGACGATGATAATGGGGGACGGCGCAGAATGTCGGGTCGCAGGCGGGAACAGCTCGCGGTACATCGTGGTCGCTCGAAGCATAATGAATCTATTGAACTGGAGCTGGAACCGCTGCTGCCGGAAATAGAGATGGGCGAGAGCggtggtggtggtggtgttggtgATCAGAAAGGCGACGACAATCGGATTGCACCGGTGGCACACGTCTGCCGGGTGTGCCTGTGCGACGAGAAGACGGACGGTGCCGATGGTGAGCAACAACGGCCAATGGAATCGCTCTACTGTACGGTTGTGCCCAAGTATCAATCGCGCAGCCTTTACTCGATACTGATCGCTGTCTGCCATCCGTTACATCTCGGCAGCAATGCCGGTATGCCGGACCGAATATGCGGTCCCTGCAAAACGAAGTTGCTGGCCGCGTACGAACTGTACGATATGTGTTTGCGCAACGACGAGATGCTGCGCCGGAAGTATCAGGAAAAGTTGCTGCTCGCATCCAGCGCTGCTGGCGGTGGCGGTGAAATGCGCCGCATCAAGAAGGAAAAGCTGGACAATAACGGTGTCGATGCGCTCGGGGATGACGATGAGGATGACTATTACCGTGGAGGTATCTCCAAACGTGGTTCAATGCAAATGAATGATCATGATGATTCGTATCTGTACGATCGGCAATATCCGCTTCATGCGGCTAGTACCGCGCGCAGAAATTCTACCATCGCAGCCTTGCAATCACGTTTCCAGCAGCAGCAACAACAATCCCCCGCCAAATGGGGCAAATATCATCGGCAATCGCAACTCGGTTCATCGAGCCACCTGCGCATACATCAGGTGGCCAATGGGCCGGAAGCATTGCGGCAGCTGCACGATGGCAGAACGAAACAATCAGCGGCCGCACGGGCATCACCGGCAACGTACGATTACAACTCATTCCACAGAGTACTGCCAAACGGGAGCCACCAGTGTACGAAGTGCTTCCGAGAGTTCAAATACCACAGCTACTACAAAAATCACTACATTAGCCAGCACGATCCTAGCAAACCATTCAAGTGCCGCAAATGTCACTACACCTTCCTGACCGAACGGTGGCTGATCGTACACATGCGTACGCACATTGCCGCGGGTGACATGATGTCGATCAACAGCGTCAGTACGATGGGTAACGATTCCGGCACGATGGATTCGTTCGACTCCTCCATGGACGGTAGCATGGATCGGCGCAAGGGTGTTAGAGGATTCGAATGCTATTACTGCGACATGTCCTTCCCGGCGATTACGCTGCAAAAGCGTCACATGCTAGCGGTGCACGCGGATAAACATCGTGGCCTGGAATGTCCAATTTGTCAGTGTCGTTTTGCAAATCAATCAAGCTTCTTGCTGCATCTGCAGGAGCACAAGGATCAGAAGCGAATGCGCAACAACGTGAAGCAGGAGGATGCGGATAATGATCCACAGGCGAAGGGTGAAGGCGAAGCAACGGGAGGTGTGCAAGTTAAGCGGGAACATATTTGTACCGTATGCACAGTGTCCTTTGGACGCGAGGCACTGCTGTTCGAGCATATGCAGGAGCAACATCCGGACGCCTTTTTGGAACAGCATACCGAGCTGGCATTCATGTGTGGCGTTTGTTTGGCGGAATTCAACGATCGTGCTGCGCTCGACAACCACACGGCGACTACGCACACTGAGGCAGAGCTGGCGGAAGCAGCCACGAAGGAAAAACCGGAAGCTGACGGAAAGGAAGGCGAATTGATAGATAACATCAAAAAGGAAGAAGAAAGTAATTCGGACGAACCGAACGAAACGGATGGTGGTGCGAAGAAAGAAACATTGGACGATGAAACGAAGGCAGATGATAAAGCGCCGGAAGGTTGTTCGGTGGTATATAAGTGCAAGATGTGCCAGGCACGCTTCGTAACGAAAAGCTCGCTAGCCACCCATCTGGAAACGCATGTGGCAGCGATGAAGCGTACCAGTGCAAAGCGACCGTACAGTGACACGATGGATAATGATGGAGCTGACCTGGGAGATAGTGTTGCCGACGATGATGAGTACAGCGGtgaggaggacgatgaggatgatgaggatgCGACAGGAGCCGAGAAGCGTCAAAAGCGCACGAAAACACAGGATGAGGATGATGATACGACGGAAGAAATTCCGATCGATCCCGATGAGATTTCGTTCAATCCGGATACGGGCGAGCAGATCTTTACGTGTCAGGTGTGTGGCAAGGTCATTAACACGGTATCGCAGTTCCGGCGTCATAAGCGCGTTCACTCGCCGAAAGGTCGGCCCTTCGAGTGTCACATATGCTTCTATCGATTTGCCATGAAGTACAGCTACACGGCACATATGTTGCGGCACGAGCTCGGTTGCAATCCCACTCAGCCCACTACCTACCGCTGCACCAAGTGTTCGGAGACGTTCACGCGCAGGAAATTACTCAGCCAGCATATCGCTACCATGCACGGCCGTTGGTCAGCTGCTTCGGGTAGTCCGATGTATAGTACCGGCATTGGTGGTGGCGGTATGTCGAACCATGGAGCGAACCTTTCGGCTCGGGCAGCCATGGCACAGCAAATGGGTGGCGGTACATCGGCAATGGCTGGCAGTGGCAGTGGCAGAGGCACTCACACCTGCCCGATCTGTTCGGAGTCGTTCACACGCGAAAGCGTACTCAATGGTCACATGAAGACGCACAGCCTAGAGGCGGCACAGATGCTACACTCGGAGGTGTGCTACCTGTGCCGGGTGTGCAGTAACGAGTTTGAATCTCGCGAACTGTACGAAGCGCACGCAACCGAGGCCCATCCGGGTACGAAGATGGATCTTATCGAATCGGGCGTAGCTTCGGACGAACCGGAGGGTACGGAACTGCCAATGGATGGTGCCGGAACGGCACAGGATGGTACGGATGCTTCAATGAAGAATCTGGAGCGCACCATTAAGGGTGAAGTCGGGGTAGACGATGAGCCAACACGggaggaaggtggtggtggtgaggaggaggaggaggaTGAAGATAACAAAAACAGCGCGAAGAATGGAGGATTCACTCTCATCTTCAAGTGCAAACTATGTTCGGGACGGTTCCTGAAGAAGAAATCACTCGACTGGCACCTGCAAACACATCGATCCATTGCGAAACAGGGTGACGGTGTAGCGATCCTTCCCGACATTGGTCCTGACGCGATCGCTGACCATCCGAAGATGAGCAAGTGTACGATTTGCGGCCAGATATTCGACAATGAGATCCTGTTCCACGAGCACATGCGTTCGCACCAGAGAGGACCGTCTCGTCCGATGCATATGGGATACGTTACACAATCGCCCCCGACGAGGCGCCGGCGGACGGGCGGCCGCAGCATCATCCAGTGCGAACTGTGCAAGAAAACGTTCATGTATCGTAGTCAGCTGCATCAGCATACCATGCTGCACCATCAGCCGGGCAAACCGTACGAGTGCAAGGTGTGCCACTATAGCTTCGTCCACAAGCTGAACCTGAAGCGCCATGAGCTGACACATCTGCGAGAACCACCACGACCACAAATGCTTGATCAGGAGAATCAAGATCAGGATGATCAGATGGACAACTCACTGTTACAGCCACTGGTGCTGATGGATGGTCCAGAGGATGATACGAACGGAGGTGGTCGTCAAACGGAACAGACCGATGGCAACAATGATCAACTGTCCGGATCGGTTGGAAGTGGACGTACATGGAAGAAGTTCAAGTGCGTCGTATGCTCGCTGGTGTTTACAAAGCAGGAAGAGCTCGTTGTGCATCTGCAGACCCACATCGAGCGCATCAACGAGGCAAAGCAACGTGGCACTACGACAACCGCCTTAACAACAACATCGTCAGTGGATATAGGAATCGCACCCACCGATCGGCAATGCAAGCTGTGCCACAAGGTGTTCAAGTTTAGCTGCCAGCTCAAGCAACACCATCTGCTGCATCATGCGCGCGAAAAGCCATTCGAGTGCCGCACCTGCCACTATCGGTTCGAGTTCAAGGGACACTTGGTGCGACATCGGGCCAATCATCATCCGAACGAGGCGAAGGACGACCACAGTATGGATATGACGAGCCCATACCTAACGTCCACACCGCTCCGTGGATCGGCTGGGCGAGGTGGGAACTATGGTGAGGGTAGTAGCCAAAGTGTGCCAAAGTATGGCGGCTTGGTAACGGACGATGTAATTATTGCCCCGACCACCTCATCCCCACGCTCGGAAAGTGGATCGGCCGGTGTGCCAACTCACCAGTGTCCGATGTGTTCGCTGAAGTTCATCAAGGCACGCTCCTTGGCGATGCATATGCGGATACATCTCGGTGGTCGTAAGTTGCGCCGCGTCATACCGGCGTCCACGGCTGCAGCGTCACCACCGGCCGAAGCACAAAGCGGTACGTCAACCGGTTCCGATAAGCTGGTGTGCCGCATTTGTGCTGGCACGTTCCCAACGGCACACGAGCTGAAGACGCACATGATGACGCATATTGGAAGCGAAGCGATGGATCTGGAGGTTCCGTTCGGTATCAGTGCGTTCAATATGCTGCACGAGAATATGTTTAACGATTCGATGGGAGGCGGTGGTGAGGGTGGTTCCTCCGGTGGTCCCATCGGGCCCGAGGATCACAGCAGCATGGGTGGTGAAGGAGGTAACAACAGCCGGACGGAAGGTGGAAGCACCGATGGGGACTACCAGCAGGATGATGGTGAAGATGGTAGCGGAGGCGATCCGTTGTTCGACAGTTCCAATCTAGAGCTTGTGCTGGATGATAATATTCTGGATAAGGACTTTAGCATGCGATACCAGCAGCAAAAGCGACGGGCGACGAAAACAGGCCACAACAATGGTGATGGTGGAGAGGACGACGGAGAAGAGGAGGACGACGATGATGAGAATGAGGACGATATCACGGACACGAACGATGGGGATGGTGGGATCGGCGACGATGACGACGAAGAGGACGAGGGCGAACAGTCGTCCGCATCAACGATGGCAAGCTTCCAGCGTAACATGAATCTGATGGCAACGCATCGCTCGAGGTTGGCAGCGACCGCCGCACTATCGGCACGCCTGCAAGCAACACCGTCCGCATCTTCCTCACAATCATCGTCATCGAACAAGGGAAAAATTGTGTGCGAGCTGTGCAAGAAGGAGTTCCTGTACCCGTGCAATCTCAACCAACACAAGCAGCTGCATCATTCGAAGGATAAACCGCACGAGTGCCGCGTCTGCCACTATCGGTTCGAGTACGTCGGCCACCTGCAACGACATATCCGGCAACAGCACGAATCGATGGCGGAGGAACTGTTGACACCGGCAGAACCGCAATCGTTCGATTGTAACTTTTGTGGCGAATCGTTTGATGCGAAGCCTCTGCTAACGGCACACGTCCACACTATGCACAGAGGAGAGAAGCCGTTTCAGTGTGACAAGTGTCCGGCAACGTTTAGCTATAAGAAATCGTACGAAACTCACCGAGAAGAACATTACTTGAAAGCCAGTAATGGAGCCTTCAAGTGTAGTTTCTGTAAGAAAACTTTCAACAGCGCACAAAAAGTAGACAACCATGTTTGCATTCAATAG
Protein Sequence
MTTGLGHHHHGAQNPLQGTADVVVGPNAFVTHGYGNETATQGHQRRMMPSVGVNQYAGSRGVDTSGASTSGASYFHDQLGTHAQSVVGTTMGHFVGVEQTNAGTYGSGGVVTGGIVPGGGRTVGPMVASPNAASPTGVAGMGGANAYGHSAGTPTHVASYMQQGSPSGMQRMNDMGTMQTSVGSTGSIVAQQQQQMVPEHRRAQLPMHSDFGSNASRSPFQTGVSLPSSSPCMVDAAAAVTGQMASCSKPSDMVMNNDPLKAANQMPVIGQQQTRASQMYGLQGAAPMEVSLESEFTFPGVDQSATDGVQQQHQQQQQQSLSLALGGNGPAPVARTDPPNERITRSATANSRAAARLAEEASEDSEALEEVIPSDPLATNDLNSVLDSKMLQGNSSTKSNSMLAQSSGINDGQLAPAMVLSQTTDQPRKRSVKHVRFMEPTEDNSFDGMQQSRVNVVSPHPLGLDHRDEEEGQEEEEDDDMDGLSLMQNLPPVESLLVEMDETLDDGDDNDDEEVEMEDDDDNGGRRRMSGRRREQLAVHRGRSKHNESIELELEPLLPEIEMGESGGGGGVGDQKGDDNRIAPVAHVCRVCLCDEKTDGADGEQQRPMESLYCTVVPKYQSRSLYSILIAVCHPLHLGSNAGMPDRICGPCKTKLLAAYELYDMCLRNDEMLRRKYQEKLLLASSAAGGGGEMRRIKKEKLDNNGVDALGDDDEDDYYRGGISKRGSMQMNDHDDSYLYDRQYPLHAASTARRNSTIAALQSRFQQQQQQSPAKWGKYHRQSQLGSSSHLRIHQVANGPEALRQLHDGRTKQSAAARASPATYDYNSFHRVLPNGSHQCTKCFREFKYHSYYKNHYISQHDPSKPFKCRKCHYTFLTERWLIVHMRTHIAAGDMMSINSVSTMGNDSGTMDSFDSSMDGSMDRRKGVRGFECYYCDMSFPAITLQKRHMLAVHADKHRGLECPICQCRFANQSSFLLHLQEHKDQKRMRNNVKQEDADNDPQAKGEGEATGGVQVKREHICTVCTVSFGREALLFEHMQEQHPDAFLEQHTELAFMCGVCLAEFNDRAALDNHTATTHTEAELAEAATKEKPEADGKEGELIDNIKKEEESNSDEPNETDGGAKKETLDDETKADDKAPEGCSVVYKCKMCQARFVTKSSLATHLETHVAAMKRTSAKRPYSDTMDNDGADLGDSVADDDEYSGEEDDEDDEDATGAEKRQKRTKTQDEDDDTTEEIPIDPDEISFNPDTGEQIFTCQVCGKVINTVSQFRRHKRVHSPKGRPFECHICFYRFAMKYSYTAHMLRHELGCNPTQPTTYRCTKCSETFTRRKLLSQHIATMHGRWSAASGSPMYSTGIGGGGMSNHGANLSARAAMAQQMGGGTSAMAGSGSGRGTHTCPICSESFTRESVLNGHMKTHSLEAAQMLHSEVCYLCRVCSNEFESRELYEAHATEAHPGTKMDLIESGVASDEPEGTELPMDGAGTAQDGTDASMKNLERTIKGEVGVDDEPTREEGGGGEEEEEDEDNKNSAKNGGFTLIFKCKLCSGRFLKKKSLDWHLQTHRSIAKQGDGVAILPDIGPDAIADHPKMSKCTICGQIFDNEILFHEHMRSHQRGPSRPMHMGYVTQSPPTRRRRTGGRSIIQCELCKKTFMYRSQLHQHTMLHHQPGKPYECKVCHYSFVHKLNLKRHELTHLREPPRPQMLDQENQDQDDQMDNSLLQPLVLMDGPEDDTNGGGRQTEQTDGNNDQLSGSVGSGRTWKKFKCVVCSLVFTKQEELVVHLQTHIERINEAKQRGTTTTALTTTSSVDIGIAPTDRQCKLCHKVFKFSCQLKQHHLLHHAREKPFECRTCHYRFEFKGHLVRHRANHHPNEAKDDHSMDMTSPYLTSTPLRGSAGRGGNYGEGSSQSVPKYGGLVTDDVIIAPTTSSPRSESGSAGVPTHQCPMCSLKFIKARSLAMHMRIHLGGRKLRRVIPASTAAASPPAEAQSGTSTGSDKLVCRICAGTFPTAHELKTHMMTHIGSEAMDLEVPFGISAFNMLHENMFNDSMGGGGEGGSSGGPIGPEDHSSMGGEGGNNSRTEGGSTDGDYQQDDGEDGSGGDPLFDSSNLELVLDDNILDKDFSMRYQQQKRRATKTGHNNGDGGEDDGEEEDDDDENEDDITDTNDGDGGIGDDDDEEDEGEQSSASTMASFQRNMNLMATHRSRLAATAALSARLQATPSASSSQSSSSNKGKIVCELCKKEFLYPCNLNQHKQLHHSKDKPHECRVCHYRFEYVGHLQRHIRQQHESMAEELLTPAEPQSFDCNFCGESFDAKPLLTAHVHTMHRGEKPFQCDKCPATFSYKKSYETHREEHYLKASNGAFKCSFCKKTFNSAQKVDNHVCIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00105281;
80% Identity
-