Acul003510.1
Basic Information
- Insect
- Anopheles culicifacies
- Gene Symbol
- ken1
- Assembly
- GCA_000473375.1
- Location
- KI424123:7890-9327[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.2 6.6e+03 -3.4 0.0 2 12 13 23 13 25 0.80 2 5 0.44 8.9e+02 -0.6 0.0 2 12 220 230 220 231 0.87 3 5 2e-07 0.00041 19.7 0.1 2 37 231 266 230 272 0.89 4 5 0.0061 12 5.3 0.0 23 35 301 313 286 321 0.86 5 5 2.7e-12 5.6e-09 35.3 0.0 4 38 342 376 340 381 0.92
Sequence Information
- Coding Sequence
- ATGGCGAACGTATCGTGCGTAAAGTGGGACAACTTTGAGGAGTACATGGTGCGTGCTGTACATGAAATCTTTGAGAATCATCAGTACACCGATTGCCGATTGGTCGTACCCGGAGGAGAGTTGTGGGCAAATCGAGCAATACTCTGCACCGCTTCAAGATTCTTCGCTTCAATCTTTACCAGTACCAAGAATATGCCTACCATGGACGCGGGTCGCCTGACGGTTCTAATTCCGGATCTGAAGCTTTCGTGTTTACGATGGGTTCTACAGTTCATCTACACCGGGGAGGTTTATTTACAACCTCACGACGTAGAACCGTTTCTAGAGGCTTGTCGTTTTCTGGAGATACGAGGAGTCCCGTACAACAAAGATCCAACGGTAGAGATTAATTTAGGAACATTCATCAACCCACTGCAGGAGGTGTCGACTGCTGACAGCAACGGTTCTGAAGCTACAGAAAACTTTGTACACGGATGTAGACAAGAAGATGATCAAGAGTGTGATGTAGCTGGGACAGACGAACGGGTTAATGCCTTGAAAGCAGAAAATGAAACAGAAAATATTCTGTACGAGGAAGTGGAATTAGGCGAGCCAGTGATGGAGAGCAGCTCTTCGATGGATTATCCGATGGAAAATGAAGATAGTGATCCGACATTTCCAGATCTGTTAAATGAAGCATTAGAAGCCTACGAAGCTCGACTTAATGCGGCCATCGATGCGATCGTAAACCGTGGCGTAAGTTATCGTATTGCATCGCAACAGTCCAACATCTCCAAGACTGTACTTTGGCGTAGAACGATGCGAATGCCCCGAATGCCTCGACCGACTTCACCGAAGCTAGCTAACCAGCGAAGCGAAGCCATCGACGCACTTAAATCCGGTGAAAAATTGCTCCACGTAAGTCAGCGTTTCGAGATTCCACTGTCGACGCTTCACCGGGATAAGATACGGCTGTACAAGAAGGGTATATTACCGGGCATAGTAACAACGAGAAAGCGTGATAAGAGTGAGCACTTTCGGCAACGGTTGGTAGAGGCGGTGAACGAATGCCTAGCAGGACGCATGTCACTTTCGGAAGCGGCCCGGGTATATGATTTGCCGAAAACGTCCATATGGAGAAATGTTCGTTCGTCACAAGCGAAAACTAGCGGTACAGATGGAAAAGATCCCAAACAGGCGAAATGGATGCAGAACTCGCGGCAGTTAAACGCTACATTACAAGATGGTTCTGCATGCATATCCAACCGGAACATGGACGTttctgggacagaattaacgcaggattctattattctgggacagaattaa
- Protein Sequence
- MANVSCVKWDNFEEYMVRAVHEIFENHQYTDCRLVVPGGELWANRAILCTASRFFASIFTSTKNMPTMDAGRLTVLIPDLKLSCLRWVLQFIYTGEVYLQPHDVEPFLEACRFLEIRGVPYNKDPTVEINLGTFINPLQEVSTADSNGSEATENFVHGCRQEDDQECDVAGTDERVNALKAENETENILYEEVELGEPVMESSSSMDYPMENEDSDPTFPDLLNEALEAYEARLNAAIDAIVNRGVSYRIASQQSNISKTVLWRRTMRMPRMPRPTSPKLANQRSEAIDALKSGEKLLHVSQRFEIPLSTLHRDKIRLYKKGILPGIVTTRKRDKSEHFRQRLVEAVNECLAGRMSLSEAARVYDLPKTSIWRNVRSSQAKTSGTDGKDPKQAKWMQNSRQLNATLQDGSACISNRNMDVSGTELTQDSIILGQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00097889;
- 90% Identity
- iTF_00097889;
- 80% Identity
- iTF_00097889;