Basic Information

Gene Symbol
ct
Assembly
GCA_000473375.1
Location
KI423106:30552-34332[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.17 8e+02 -0.2 0.0 31 50 146 165 139 168 0.80
2 3 3.7e-32 1.8e-28 98.1 0.0 3 77 398 473 396 475 0.96
3 3 6.1e-31 2.9e-27 94.2 0.0 3 77 690 765 688 767 0.96

Sequence Information

Coding Sequence
TTGCTTTGCTTCTACTTTACCGCAGCCACGCCACACGGCTGGCCCAATGTCGCTGGTTTATATGACAGATGTATACTAATTGCAGGTGCAGAACCCGGAATGCCATCTTACGGTCGACCAGACGGAGATCTTAGCGATGACCGCATGCAGCAAATCCTGTCCGAAGCCTCCATGATGAAGCGAGGCGATCAGCCAACACCCCAACAGCAGGCGCACCATCAGCAGCAAATGCGCGAACAGATGCAACTGCAGCAGCATCAGCTACAGCAACTTCACCTGAGCGGGCTGGATGACTCTACGCAGCATAGTGACAATGATTCCAAATCTCCACACAACCGTGATGTCCATTCACCCTTCTCCAAAGACTATCTCAGCGGGCGTCTGGGCAGTACGGGACGGCCCAAAAAGTACGATAACGACGACATCTCGCAGGATAAGATCGCAAAGATCTACCAGGAAGAATTCTCCAAACTGATGCGCAGTCCTCGAGAGTTCCCAAACGGTGGTATGCCACCAATGGATCGCGTACAGGACGATAATCTCCGGATGGCATTCGAGGCCTACCATCGAGAACTGGCCAAGCTGCAACAAAACGCATCTGCTGCCCTTCCAGGCATGCCCAACATTTCCAACCTTCCCAACTTCTTGGCACTCcaacaccagcagcagcagcagcagcaacaacagcagcaacCATCCCAACCTTCCACACCGTCGGGACAGCCGTCGACTCCATCATCTCAACCTTCGCAGCACACTACGACCGGGTTGAACGGAGGCTCTGTTCAGGATCTTTCCCTGCCAAAGGAGAAGCAATCGTCCTCATCTAAGCTGAACGGTACGATATCCGATGCCGAGTCCGATGCCGACATGAGTCAGAAAGAGCTGGACGAAAGCATGAAACACAGCGCCTTCAGTCTGGTGAAACCAAAGCCTTCGGAACCTTCGGGTATCTGTACGCCAACTACGACCGCGTCCTCAGCGGCGCCCAGTCCCATCGGCAACAGTATTCTTCCCCCGACAATCACACCTACGGACGATTTTTCCGTGGCTGCCAGTCCACTGCAGCGGATGGCGTCGATCACCAACTCGCTCATCACGCAACCACCCGTTACGCCACATCACACGACACAGCAGCGTCCTCTGAAAGCTATCCTGCCACCCATCACCCAGCAACAGTTCGACCTGTACAACAATCTCAACACGGAAGACATTGTGCGACGCGTCAAAGAATCACTCTCGCAGTATTCCATCAGCCAGCGACTGTTTGGCGAGTCCGTCCTGGGTCTCTCGCAAGGTTCGGTCAGTGATCTGCTTGCCCGACCAAAGCCCTGGCACATGCTGACCCAGAAAGGCCGCGAACCCTTCATACGCATGAAGATGTTCCTGGAGGATGAGAACGCAGTGCACAAGCTAGTCGCCAGTCAGTATAAGATCGCTCCGGAGAAACTTATGCGCACCGGTAACTACAGCGGTACGCCTCAGCTGCCCGGATTACACATGCAGAAGCAAATGCCACCGACCATGCCGAAAATGTTGAGCGACTCGATCAGCAAGCTGCAGCAGGATCAACAGAAAACGTTACTCCAGCTACAGATCTCCCAAATGCAGCAGCAAATGCCCACGGCCCAAGCCGCTCAAGCCGCTGCCCAGCATCAGCATCAACTGGCCGCAGCAGCTGCCGCCGCGGCCGCTGCCCATCATGCAGCCCAGGTGCAGGAAGTCCAGCGCCATTCGGCACAGCAACCACCTTCCTCTCAGCCATCGCCACTCGGTGCCATGGGCTCCCAGAACTCCTCCTCACAGCAACGGCCTCAGCAACCTTCTCCGCAGACAATGCTCCTGACGCCTCCGGGCATTCCTCCCCAGCATGCGATTGCTCTGCAGGGTCATGCGGGAACGCAAGAGAAGAAGTCCTCCATCATGATGCCAATCCACTCGCCCGTTCCGCAAGGTCCACCCGGTTCCGTTGGACAGCATGCGTCCCAACCGGGTGCACCAAACTCCATGCGAGGATCCCTCCATCAGCATATCTCACCGACGGTGTACGAAATGGCCGCACTAACGCAAGACCTCGATACGCAAGTGATCACGACCAAGATCAAGGAAGCACTGCTGGCGAACAACATTGGCCAGAAGATCTTTGGTGAGGCTGTACTCGGACTTTCACAGGGTTCCGTTTCGGAATTGCTGTCCAAACCGAAACCCTGGCATATGCTGAGTATCAAGGGTCGCGAACCATTCATCCGCATGCAGCTATGGTTGAGCGATGCGAACAACGTCGAGCGACTGCAGGTGCTGAAGAATGAACGGCGCGAGGCCAGCAAACGGCGTCGATCGACCGGTCCCGGTGGACAAGACAATAGCAGCGATACCTCGAGCAACGACACGTCCGAGTTCTACCACTCCAACTCACCCGGACCCGGTTCGGTTGGATCGGCTACGGCTCCTCCCAACAAAAAGCAGCGTGTGCTGTTCTCCGAGGAACAGAAGGAAGCTCTCCGACTTGCTTTCGCCCTCGATCCATACCCCAACGTGCAGACAATCGAATTTTTGGCTAGTGAGCTTGGACTGTCGACTCGCACAATCACCAACTGGTTCCACAACCATCGAATGCGGTTGAAGCAACAGGTTCCCCACGGTCAACCCTCCGAACCGATTCCTTCGCGCGAAAACCAATCCGGAGCACCGTTCGATCCGGTACAGTTCCGCGTTCTGCTTGGCCAGCGGCTGATGGAAATCCAAAAGGAAAGGTTAGGTCTCAGCGGCATGCCACTACCCTATCCGCCTTACTTCGCAGCTACCGCGCCTGCTACCAATCTGGCCGCTCTGATCGGCCGCGGATTCATGCCCGGTAGCGAGGCGGATCTGGCGGCCCTCAACAAGAGCATCAGCGAACAGATGAGTGGTCTCGATCTGTCCATGCCATCCACGTTGAAGCGCGAAGGTGATGACGACTACGAGGATGATGCCGAAAATGAAGAGGAAGCCGGCAGTGGTCACATGAGTGATTCGGAATCCATGGACGGTAGTAGCAAGCGCGGTGGCGATGATGACGATCTCAAGACGTCCCTATCGCTCGCCAGCTTACAGGCCATGTCTCGGATCAGCCGGCGCAAGCCAGCCGCCCCACAATGGGTCAACCCAGACTGGCAGGATCCGGACAAGAAGACGGCATCCGTCGCATCGGCAGTCTCCAACATTCCCTCCGCCAAGAAGGATGCCGCGGACGCCATCATCAATGGGGTGTGTGTATTGCAGCCGCCCGATGGTGTGCCTTCGGTGCAGCAACGTTTCGCCGCGGCCATGGCAGCAGCAGCAGCTGCTGCTGTTGCGGCGGCCACCGGTGCAGGAGCGACCGTGCCTTCCCAAAGCCAAGACGACCCATCGAGTGACGCGGAAAACGAAGACGATGACGCAAAGTCGACACACTCGAAACACTCCTCGTACGGTTCGGACGGAAAGCTGGACGAAGATCGACCAAGAACTTCCAACGACGAATCGGAATCGGAAGCACCGTCGGATGCGTTACGACCGGCGGAAGAGACGCCCCTTTCGGGTGCACCGGAAGCGACACAGGAGAGTAACGGAAACCGATCGGGCACCGCAAGTCCCGCTTCTTCCTCTGTAACGGTCAAGAAGGAGATCCTCGACGATAACAACGGTGATCGATGGGATGCGTACTAG
Protein Sequence
LLCFYFTAATPHGWPNVAGLYDRCILIAGAEPGMPSYGRPDGDLSDDRMQQILSEASMMKRGDQPTPQQQAHHQQQMREQMQLQQHQLQQLHLSGLDDSTQHSDNDSKSPHNRDVHSPFSKDYLSGRLGSTGRPKKYDNDDISQDKIAKIYQEEFSKLMRSPREFPNGGMPPMDRVQDDNLRMAFEAYHRELAKLQQNASAALPGMPNISNLPNFLALQHQQQQQQQQQQQPSQPSTPSGQPSTPSSQPSQHTTTGLNGGSVQDLSLPKEKQSSSSKLNGTISDAESDADMSQKELDESMKHSAFSLVKPKPSEPSGICTPTTTASSAAPSPIGNSILPPTITPTDDFSVAASPLQRMASITNSLITQPPVTPHHTTQQRPLKAILPPITQQQFDLYNNLNTEDIVRRVKESLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGTPQLPGLHMQKQMPPTMPKMLSDSISKLQQDQQKTLLQLQISQMQQQMPTAQAAQAAAQHQHQLAAAAAAAAAAHHAAQVQEVQRHSAQQPPSSQPSPLGAMGSQNSSSQQRPQQPSPQTMLLTPPGIPPQHAIALQGHAGTQEKKSSIMMPIHSPVPQGPPGSVGQHASQPGAPNSMRGSLHQHISPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPGGQDNSSDTSSNDTSEFYHSNSPGPGSVGSATAPPNKKQRVLFSEEQKEALRLAFALDPYPNVQTIEFLASELGLSTRTITNWFHNHRMRLKQQVPHGQPSEPIPSRENQSGAPFDPVQFRVLLGQRLMEIQKERLGLSGMPLPYPPYFAATAPATNLAALIGRGFMPGSEADLAALNKSISEQMSGLDLSMPSTLKREGDDDYEDDAENEEEAGSGHMSDSESMDGSSKRGGDDDDLKTSLSLASLQAMSRISRRKPAAPQWVNPDWQDPDKKTASVASAVSNIPSAKKDAADAIINGVCVLQPPDGVPSVQQRFAAAMAAAAAAAVAAATGAGATVPSQSQDDPSSDAENEDDDAKSTHSKHSSYGSDGKLDEDRPRTSNDESESEAPSDALRPAEETPLSGAPEATQESNGNRSGTASPASSSVTVKKEILDDNNGDRWDAY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00099478;
90% Identity
iTF_00094935;
80% Identity
iTF_00097661;