Basic Information

Gene Symbol
GATA-B
Assembly
GCA_943734635.1
Location
OX030880.1:42142257-42164602[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-17 5e-14 51.4 3.6 1 34 698 730 698 732 0.97
2 2 8e-19 1.6e-15 56.2 5.7 1 35 774 807 774 808 0.97

Sequence Information

Coding Sequence
ATGCCGGAAAAGGATTCGTTCGACGGTGCCGAGCCGAGTTATGGTGCGATCGTGTCGGCGTACAAGTCGGCAGTTGTTGTGTCACCGCAAACCAGTGCACAACATCAGCTCAGCCAGCAGCAACAACAGCGTCACGATAACGGCCACCACTCTTCGCAACCGATCGACGGCCAGCAGCAGCAGCAGCAGCACCCGGACACGTTCGGAACCGTGGACCAGGAACGCGATCGGCGTTTATCGGTGGCCGAGCCGACCGAGCACGATATCGGCGAGCCGAGCCTGATAAGGGCGGCGACGCACACAGGTGAACAGGCCACGAGTACCGGTGCCCTCACCAACACCCCCTCGGTGATAACGTCCTGCGCGAAGGTGTTATCGGGAGCCGGCGCCGTGAAGTTGTCACCGTACGGCGGCAGCGATCAGCTGGCCAGCGATAGCGGCTCACCTCCACGCTTCTCCACGCTACACACCGTCATTAGCAGCAGCAACAGTAGCACCAGCTACGGTCATTCACCCGTCACCCCGTACCACCATCACCCGCAGCAGCATCATCCGCCGCAGCATCACTCGGTGTGGCCTTGCGACCTGAGCTACAAGCCGGTGGTGGACAAGGCCCTGAACCCGTCACCCGGACCGGGCGACCTGTCACCGCCACCGCAGCCGCCTCAGCCGCAACCACCACCGCACGCATCGCACCCTCGCTACCTCGGCGAACCGGACGGTGGGCCCGATCCGGCGCTCCTGGCCGGAATGCGCGGCAGTCTGCTCGCGATGTATCCTTCGTACGCGTCGCCGAACGGTGCCGGCGGCGGCGGCGGGTGCCTTCAGCTGGGCGATACGACCGTACTCCAGCATCAGCGGGAAGAGGAGATGGCCTCCCTGCACCACCATTTGCACCATCATCAGCATCACCAAGAGGCGATGGCCCAGCAGCACAGCATCGACGAGATGATTGCCGACACGCTCAAGGACGAGCAGTGCTCGATCGTGGACAGCTACCTCACCCCGCACGGGACGCTGGTGGTCGGTGGTGGATCGGTGGCGGAACACCACCTCAACCAACAGCATCAACAGCCGCCAGGGGAACACGCCAGCCATTTCGAGTACGCCAGCATTTATCACAACAACAATGACAAGAGCGTCATCAACTACAACCACGCGGCCCAGCATCAGCAGCATCAGCAGCATCAGCAACACCACCACCACAACCATCACGCCGGGGCCCACACGCACACCACCAGCAGTGAGTCGCGCAGTCCGGACTACTCGCATGAGGAGTACGATGGTGGGCTGCAGAGCTTCACCCAGTTGATCAACGTGCCTCGGGCGAGCGATACCGCTTCGTCCTCGTCGTCGGCGGCCGCCATGTACCATCATCAGCATCCCCATCATTCGCAGCATCATCAGCAGCAGCATCATCAACATCAGGTGGCCGCAACGACCGCCGCCGCTGCCGCCGCCGCCGCATCGGCTGCGCTGGCCGGCCATACCACCCCAACACCCTCGATGACGTCGTCGCCCACGTCGTCCGGCGATCACCTGGCGCACCCGGGCGCGATGGTCGGTAGCACCTCGATCCTGCACTCGGCCGCCGCCGCCGCCGCGAGCAACGGATCCGGCAGTGGTGATCCGGCCGGGATGTCGGCGCTCTACGATACGCTCCAGGCCGGTGTCCTTCCTGGCGGCCCATCGTACGGTCGTTGCTCGTTCTCGACGATGCAGTACTTCAACGGCAGCCCATCGCAGGAGGCGGCCCACCTGTGGACGAGCGGCGTCGGTGGGCTCGACGCCGACTACATGAAGGGCACCCTGCCAGGGTTCCAGCGAATCGCTTCCGGGGCCGGCACGGCCCGGGGCAACCCGTACAGCTCGATCTCGGCGGCACCGTACGCCCAACAGAATGAACCATGGTCGCAGGTGTACGACACCAACAGCATCGCGTACAGCGTGGCCACCTCCAGCACCACCACCCCGGCCACGGTCAATCGGGGTCGAACGAGCGTCCCTACGACCGCCTCGTCCCACTTCCCGGCCGCGGCTTCGCTCACAGCCATGGGCCTCGACGCGGACCTGTACACGGAGGGACGAGAGTGCGTCAATTGTGGGGCCATCCACACGCCCCTCTGGCGTCGCGACGGAACGGGCCACTACTTGTGTAACGCGTGCGGACTCTATCACAAGATGAACGGCATGAATCTGGCCGCAGAACAGGGCGGGGATCTCTATAAGAACAACTATGCCTACAGTAACTTGACCACTCGCACCACCGAGGAAAAGCAAAGCCGGCGCATGAGCTCGGCACGGCGAACGGGACTGCAGTGTTCGAACTGCAACACTACGAACACCTCGCTGTGGCGGCGCAACCAGGTCGGTGAACCGGTATGCAACGCCTGTGGCCTCTACTACAAGCTACACAACGTCAACCGTCCGCTGGCCATGAAGAAAGATAACATTCAGTCACGCAAGCGGAAACCGAAGGGAAGTAAGAACAGCGACGGAAGCACCACCAAAAGCAAACTGAAATCAGAAGAGCTGAAAATTGTGCACATTGGCGAGGCGTCCAGCTACGACAAGAGCGTCCGATCGTCCCCATCGAGCGAGGGAAGCAACCAGTCGCCGTCACACCATGGCCACCTGTCGCCAATATGCTACACACAGCAGGTTCCGTCGCCGATCACGAGCACGCCGTCGAACGCGGCCACCGGCGGCAAGTACGGTGCAGCGGTGCAGCCGAAGAACAACAGTAGCGGCGGCGTGTACATGATGTCGTCACCGTCGCCGATGAACTCACTGTTCGGTGGTAGCCCATCGAACGCGGTGTCTTCCCACCACCACCATCAGTCGCCGCTGAGTCCGGACGGTGGCAGCTACTCGCTATCGGGGGGCGTCGGAGGTACGGGCCACGCCGGAAGCAACGGGTCGACAATGGTGAGCCCCAAGTACCACCAGAGCCCTCCACAGTCACCGGTCACCGACCAGATGTACTACGAGATGCCAGGGAGTGAGATGCTGCCGGCGGACGTGCCGGGGATCAAGATGGAGCCGATGGGCGGGAACCACTACGGCGGCGGGGCATACCAGCAGCAGCACGACCACATCCTCGGCGGGCTCGGTGGCGGGCACAGTCAGAGCCGCAGCCCCTCGTCGGTGGCGGAGGACGACGGCGAGCAGGCGCACTCGGCGCAGGATTTGGTCGAGAGCAAGCACAACATCAATCGTCCCACCGTCGTGTCGATGTCCAGATAG
Protein Sequence
MPEKDSFDGAEPSYGAIVSAYKSAVVVSPQTSAQHQLSQQQQQRHDNGHHSSQPIDGQQQQQQHPDTFGTVDQERDRRLSVAEPTEHDIGEPSLIRAATHTGEQATSTGALTNTPSVITSCAKVLSGAGAVKLSPYGGSDQLASDSGSPPRFSTLHTVISSSNSSTSYGHSPVTPYHHHPQQHHPPQHHSVWPCDLSYKPVVDKALNPSPGPGDLSPPPQPPQPQPPPHASHPRYLGEPDGGPDPALLAGMRGSLLAMYPSYASPNGAGGGGGCLQLGDTTVLQHQREEEMASLHHHLHHHQHHQEAMAQQHSIDEMIADTLKDEQCSIVDSYLTPHGTLVVGGGSVAEHHLNQQHQQPPGEHASHFEYASIYHNNNDKSVINYNHAAQHQQHQQHQQHHHHNHHAGAHTHTTSSESRSPDYSHEEYDGGLQSFTQLINVPRASDTASSSSSAAAMYHHQHPHHSQHHQQQHHQHQVAATTAAAAAAAASAALAGHTTPTPSMTSSPTSSGDHLAHPGAMVGSTSILHSAAAAAASNGSGSGDPAGMSALYDTLQAGVLPGGPSYGRCSFSTMQYFNGSPSQEAAHLWTSGVGGLDADYMKGTLPGFQRIASGAGTARGNPYSSISAAPYAQQNEPWSQVYDTNSIAYSVATSSTTTPATVNRGRTSVPTTASSHFPAAASLTAMGLDADLYTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYHKMNGMNLAAEQGGDLYKNNYAYSNLTTRTTEEKQSRRMSSARRTGLQCSNCNTTNTSLWRRNQVGEPVCNACGLYYKLHNVNRPLAMKKDNIQSRKRKPKGSKNSDGSTTKSKLKSEELKIVHIGEASSYDKSVRSSPSSEGSNQSPSHHGHLSPICYTQQVPSPITSTPSNAATGGKYGAAVQPKNNSSGGVYMMSSPSPMNSLFGGSPSNAVSSHHHHQSPLSPDGGSYSLSGGVGGTGHAGSNGSTMVSPKYHQSPPQSPVTDQMYYEMPGSEMLPADVPGIKMEPMGGNHYGGGAYQQQHDHILGGLGGGHSQSRSPSSVAEDDGEQAHSAQDLVESKHNINRPTVVSMSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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