Acru006290.1
Basic Information
- Insect
- Anopheles cruzii
- Gene Symbol
- -
- Assembly
- GCA_943734635.1
- Location
- OX030879.1:58197451-58198909[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 2.2 1.3e+02 3.1 0.1 2 9 162 169 161 174 0.90 2 10 0.083 5 7.6 0.2 12 23 181 193 177 193 0.86 3 10 0.0088 0.54 10.7 0.2 2 23 201 222 200 222 0.96 4 10 0.00045 0.027 14.7 0.2 1 23 253 276 253 276 0.96 5 10 0.1 6.3 7.3 0.5 2 23 282 303 281 303 0.80 6 10 2.3e-06 0.00014 21.9 0.9 1 23 307 329 307 329 0.96 7 10 0.00056 0.034 14.4 0.1 2 23 342 364 341 364 0.96 8 10 1.6e-05 0.00097 19.3 0.5 2 22 371 391 370 391 0.95 9 10 5.4e-06 0.00033 20.8 1.0 1 23 398 420 398 420 0.98 10 10 0.00055 0.033 14.4 2.9 1 23 426 449 426 449 0.97
Sequence Information
- Coding Sequence
- ATGACCACGATACCGAACGTGGATGGTGCGGGATGCGACGGGGCACAGCCCGAGCCTGCACGCTGTGCCCTCTGTTTAGCGGACGGTCCCATAATGCTGTCCATTGACGATGAAAAGGATAACATGTCGGCCACAATTCAACTACATCTCGCTCTAGATTTGGACAAATCTCAATCCGAGTACCGGCATCGTGTATGTGGCACTTGCTGGAAGGTGGTATCGGAGTTTCACTCCTTCTACCTCATGGTACACGATGCCCAAAGTGATCAACGAAAATTCGTTGTCGAAGATTCGCTAAAGGACCCACTCGCTCCATCGATCGGGTACCGGCGCGGTAGCTCCGGCAGCTCCGACGATGCACAATCTTGCAAATCATCGCCGCTGCGAGACAGCACGGAAATTTTGACCGAACCGACCACAAAAGCCACCAGGAAGGGCAATTCCAACATCGACAGCGAACTGCTTGAATTTTATCAGCGTATTGTGTGCCATATTTGCGATAAGATGCCGCGCAGCGAAGAGGCCGCGATCGAGTACCAAACGCTCGCGCAACTGAACCGTCATATGCGCACCGTGCACAATCTGCAACACGGTACGTTACGGTGTCCCGTTTGTGGGTTGAAAAATCGCACCCGAGCCCAGCTGTGGCAGCACAAAGAAATGCACCTGCGGCCGGACCAGTATCGGTGCACCGTTTGCCAAGAGGTGCACCAGAACTTGGAGCAGCACACGAGAAAGAGGCACGGCGATCGTGTCCACATATGCGAGCAATGCGGTAGACGCTTTGCGCTTCCCGGCCGTCTGGCCGTGCACGTACGGAAATCGCACGGCGAGCGTGATGTAATGTGTGACCAGTGCAACAAACCCTTTAACAGGTACACGATCGACGATCACAAACGCAACGTCCACCACGCAAGCTTCATCTGCGAGTATTGTCCGAAAACGTTCAAATCTCGCTTCTGGCTCAATCGTCACGCGGAAAGTCACGCCGATGGGACGGACGGCAAGGCGCGGCACGCAGTATCCTGTACCGTTTGTGGTACGGTGGTCAAAAACAAGTACATTCTGGTGGCCCACATGCGCCGCATTCACAGCGACCAGCCGGCGGTTAGCTGTGGAACGTGCGGTAAACCCTTCAAATCGCAACGCCATCTAAACGGGCACCTGCGGACCGTGTGCACGGAACAGGCGTTTCCGTGTGCTGTCTGTGGCAGGAAGTTTAAGAAGAAGATCAAACTCCGGGAACACATGACCACACACACCGGCATGCCGCTGTACGCGTGCACGTTTTGTCCGCAGACTTTTAACTACGAGTCCCACTTCTACACCCACCGAAAGGTGGCGCACCGTGAGCAGTGGCTCGAGCTACAGCAGAAACGAAAGGACGGATATCGTTCGTAG
- Protein Sequence
- MTTIPNVDGAGCDGAQPEPARCALCLADGPIMLSIDDEKDNMSATIQLHLALDLDKSQSEYRHRVCGTCWKVVSEFHSFYLMVHDAQSDQRKFVVEDSLKDPLAPSIGYRRGSSGSSDDAQSCKSSPLRDSTEILTEPTTKATRKGNSNIDSELLEFYQRIVCHICDKMPRSEEAAIEYQTLAQLNRHMRTVHNLQHGTLRCPVCGLKNRTRAQLWQHKEMHLRPDQYRCTVCQEVHQNLEQHTRKRHGDRVHICEQCGRRFALPGRLAVHVRKSHGERDVMCDQCNKPFNRYTIDDHKRNVHHASFICEYCPKTFKSRFWLNRHAESHADGTDGKARHAVSCTVCGTVVKNKYILVAHMRRIHSDQPAVSCGTCGKPFKSQRHLNGHLRTVCTEQAFPCAVCGRKFKKKIKLREHMTTHTGMPLYACTFCPQTFNYESHFYTHRKVAHREQWLELQQKRKDGYRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -