Acru003395.1
Basic Information
- Insect
- Anopheles cruzii
- Gene Symbol
- ZFX
- Assembly
- GCA_943734635.1
- Location
- OX030879.1:20974843-20977302[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00079 0.048 13.9 1.3 1 23 172 195 172 195 0.96 2 8 1.1 67 4.1 0.9 1 23 468 491 466 491 0.92 3 8 3.1e-07 1.9e-05 24.7 0.3 2 23 498 519 498 519 0.97 4 8 0.00011 0.0067 16.6 1.1 1 23 525 549 525 549 0.99 5 8 2.3e-06 0.00014 21.9 2.7 1 23 559 581 559 581 0.96 6 8 6.9e-06 0.00042 20.4 0.4 2 23 592 613 591 613 0.96 7 8 1.2e-07 7.2e-06 26.0 0.7 1 23 619 641 619 641 0.98 8 8 0.024 1.4 9.3 1.3 2 20 649 667 648 669 0.94
Sequence Information
- Coding Sequence
- ATGGATTACAAAAGGATAGTAACGCTCAAGAATCATCTCCCGCGGGAGCCGGAAAGCCACTGGAGCAAAAGACGATCGCAGTTGACCACCAGACGCACGTACAATCGGCAACCGAGTCGGGGGGGGCTACCGCAGGCAGTAAAAGAGTCATCCCCCAGCAGCGATAGTGGCATCGAGTCCGTGTTCGATGCTTCAGCCAACGCCAATACTACAAAGTGTTCCAAATTGGGCTTGGAAACGGCTGAGCAGCATGATGCGCGTGCAGAGCAACCGGCGTCCACCGGCCAAACACCTTCGACTGGTGGTGGCAGTGACGACGAGCGAACCGTTGTTGCAAGCGCGGAAGCGAATGTTGAAGGGCGAAGGTCGGATGATGGTATCGGTGCGAGCGGGCTGGACGAGACCACCACCGTGAAGCCATCGCGGTTGAGTCGCGTCGGGAGAAAACTATCGGCCAAGGCAAAGGAAGCAATGGCGGTCGCTGAAGCTCCTCCACAACTGATTTTTGGAGACTTTCAGTGTCGCAACTGTGACATGTCCTTTAAGACTGAGCTTTGGTACAAAAAGCACCTGCTGAACGTTCACCGGCACCCGGAGACGAGTCCTCCGAGTGGTGGAGACCTTGCACCGAACGTGGTTGCACGTTGTAATGAGAAGAACGTTCTGTCGGGAGAAGCAGAGCATATGACTGAAAACGCATCAACGCTTGCCCCGGATACTGCCCCTGAAACGGCGAATGGGTTGGATAAAAATGGCCATCACATTGAGCCGGACGCAACGACGAATGGGACGGAGGAGCAGGAAGATCTGGTCCCGCCAGTAGAAATAAATGGAACATCAAGTCGCGACGCGATGGCGGACACTGTGGTGCTGAATGAGATGGTGGGCCGTAAGCGCAAACTAACCGACTCCAGTGACGAAGGTACCGTAAAGAAGGGCCGTAAAGACATCAACGTGACACCACCACCGCCGTCGGTGAAGGAACCAACCGAACCGTTCACACCGGTGGTTAAGGCGAAAATATCGAACTTAAAGGTCGAATACCGTCCGTCTAGTGTCCGCAATCGGAATGCCGTGGTAGCGGCAGAGGCAAAGCAAGAACTGCAAGAGCAAACCGTGATCGATGAACAACAGCTTAACGTCGGCGTAACTTCCCAGCTGGTGCTTGATTTGCCGACGGAAACGAAAGCGGACGAAAAGgcgtcgatagtagctgcaccaccaccagcattagcaccggaagtagcaccagaagcagcaccagaagcaTTGGAGAGCAGCGTGGCGGAACCGCCAGTCGAGATGACCGAAGCCAAGGTGGAGCCAGAGGATCCGAATCGCCTAACGCCATTCGAGATGGCCAAGGTGACGATCATTGAAGCGGGGGTCGCGGGGTGCCACTTCAAGTGCATTATATGCGGTGGACAGTTCAGCGATATGCCCGCCATCAAGGCGCACCTCTCGAAGGTGCACGCGGCCATCAAGCGCCGTTCGTGCGAGTACTGTGGCCGTTCGTTCGTCCAGACGGGCGATCTGACGCGCCACATACGGATTCACACCGGGCACCGACCGTTCAAGTGTCCGTATGTCGAGTGTAGCTTCGCGTTCATTTCGTCCGGCGATCTGCACAAACACGTCCGGCGTCACAACGTGTCCGTGCCGGTCCCGAAGCCGCACGTGTGCGACTACTGCGGCAAAGAGTTCGAGCGGTCGTACGACTTGAAGCGCCACAAAACGATGCACCTGAAGACGGAGCCGGGCTTCAAGGGCATCTCGTGCGAGGTGTGCGGCAAGATGTTCGCCCGGAAGGATCAGTATCGGGCGCACACGTACCGCCACATCGGGTACCGCCCGTATCGGTGCGAGGTGTGCGGCAAAACGTTCACCGATCCGAGCAACTACTCCAAGCACGGCCGGCTCCACGAGATGGACGGCGTCGAGGTGGTGTGCTACTTCTGTTCGCGGAAGTTTAAAAACAAGAGCGCCATCTCGAAGCACATCTTCCACTGTCAGCAGCGGACGCAGGGCACACGCAAGACGAACCGCGGCGTCCCGCTGGCAGCCTCGTTTATTAAGGGCATGAAGAAGGAAGCGAAGATTGAGTCGGACTGCGGCGGGGAGGAAGAGAATGGATGGAACGACGACGATGATCAGCAGTCCCTCCTAGCAGCCTCGGTTACGGGCGGTGGTGGAGGCTCAGCGGTCCGAAAATCCAAGCGCGGCGGCGGCGGCAGCAAGGGGAAGAGCCGACGGCAACAACGGCGACGCGCGACGTTAGACGATGATAGTAGTGATGATTCGATGTACGATGCGAGCAGCTCCCGCCACACCACCAGCGATCAGGAGTCACCGGATGAAACCGTTCCGGTGAAGCGAAGTCGCCGAAGCAAACCGGCGGCTGACAACACCGCCACCGCCGTCGCCGCCATAAGTAGTGCTGCGGCGGACACTTCGTCGTAA
- Protein Sequence
- MDYKRIVTLKNHLPREPESHWSKRRSQLTTRRTYNRQPSRGGLPQAVKESSPSSDSGIESVFDASANANTTKCSKLGLETAEQHDARAEQPASTGQTPSTGGGSDDERTVVASAEANVEGRRSDDGIGASGLDETTTVKPSRLSRVGRKLSAKAKEAMAVAEAPPQLIFGDFQCRNCDMSFKTELWYKKHLLNVHRHPETSPPSGGDLAPNVVARCNEKNVLSGEAEHMTENASTLAPDTAPETANGLDKNGHHIEPDATTNGTEEQEDLVPPVEINGTSSRDAMADTVVLNEMVGRKRKLTDSSDEGTVKKGRKDINVTPPPPSVKEPTEPFTPVVKAKISNLKVEYRPSSVRNRNAVVAAEAKQELQEQTVIDEQQLNVGVTSQLVLDLPTETKADEKASIVAAPPPALAPEVAPEAAPEALESSVAEPPVEMTEAKVEPEDPNRLTPFEMAKVTIIEAGVAGCHFKCIICGGQFSDMPAIKAHLSKVHAAIKRRSCEYCGRSFVQTGDLTRHIRIHTGHRPFKCPYVECSFAFISSGDLHKHVRRHNVSVPVPKPHVCDYCGKEFERSYDLKRHKTMHLKTEPGFKGISCEVCGKMFARKDQYRAHTYRHIGYRPYRCEVCGKTFTDPSNYSKHGRLHEMDGVEVVCYFCSRKFKNKSAISKHIFHCQQRTQGTRKTNRGVPLAASFIKGMKKEAKIESDCGGEEENGWNDDDDQQSLLAASVTGGGGGSAVRKSKRGGGGSKGKSRRQQRRRATLDDDSSDDSMYDASSSRHTTSDQESPDETVPVKRSRRSKPAADNTATAVAAISSAAADTSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -