Acru002083.1
Basic Information
- Insect
- Anopheles cruzii
- Gene Symbol
- bab1
- Assembly
- GCA_943734635.1
- Location
- OX030879.1:3004659-3007503[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.56 1.1e+03 -0.8 0.0 8 23 86 102 84 103 0.75 2 5 2.4 4.6e+03 -2.8 0.1 29 36 227 234 223 241 0.82 3 5 2 3.9e+03 -2.5 0.1 6 16 389 399 389 400 0.87 4 5 1.5e-12 2.9e-09 36.3 0.0 1 45 498 542 498 542 0.95 5 5 0.022 43 3.7 0.8 4 20 696 711 695 711 0.93
Sequence Information
- Coding Sequence
- ATGGGTAGCAGCGAGGGGCAGACGTACtgtctgcggtggaacaaccacaagtcgaacctggtcgagatcctgttcgcgctaatcaagatggagtgctacgtcgactgcacgatctacgtggacgagcaggtccagttcaaggcgcaccgggtcgtgctggcggccaactcgccctacttccagtcgatcctgcaggacgtgccgatggaccactgcagcatcctgttcccgggcgtgcaggagttcgagatgcgcgccctgctcgagtacatgtacacgggcgaggtgagcgtgacgcaggcgcagatccctcggatcatgaagatcgccgaacagctggaggtgaagggcctctacgacatggccgaCCTTAAGGGAGGTGGCGGCGGCGGTGGTGGCGGGGGCATCGGAGGACGCTTCGACATCGACCACCACCAGCACCAGCTGCTGCAGAACCACCATCATCGGGACCCGGCCACGATGCTGTTGGCCAGCAACAACAACTACAACAAGGCCGGAAGCGGCGCTGGCCACTGCAGCTCGGCGGCCGCATCCTCCTCGTCCGCGTTTCAGTCGGCCCCGTCACCCGGTGCCATCGCCACATCGTCGACGGCCACGAACGTAGTGTCGCAGGCGCACAGCAGCAGCTCGTCACCACCTTGCACCACCTACAAGTCACCCTACTCCAGCCTGTACTCGCGCAGTCCGGGTGCGGTGGAGCGGGACCGCGAGCGCGAGGAACGCAGCCGCGACCGGTCTGCCTCTTTCTCGCACTCCACCACCACTCCGACCACGTCCTCACCACACGCAGCCTCCTCCAGCGGAGCCGGCGCCATCGCCACGACGATCCAACAGATCGGTGGCTCGGTAGCCGGCGGTGGGGCCTCCACATCGTCGTCATCGGCGGCGGCCGCCGCCGCCCTAGCCGCCGGCTGGCCTGCCCTTGGCGCCCAGATTCCGGTCACGCTCGCCCAGACCCAGCTCCACAGTATGCTCAGCTCGGCGTACGACTCCAGCACCGACATGAACCCGCTCAAGCGCAAGAAACTCCAGTCGATGTCGAGCATGATGCGCGACACCCCGATCCTGCGGAATGTCCTCGCTCAAGCCAACCCGCCCGACTCGTCGCAACCCCTCGTCGGTGGTTCTCCCTCTTCGGCGGCGGCGGCCGCAGTGGCCACCATCCAAACCGGAAGCCTGCATCTGAAGGGATCCGGCGGCGGAGGCGCCGGTAGCGGCGTCTGTGGCTCCGGAGTCCAGGAGCACCCGGAGCGTCCCAGCAGTCACCACTCGAACGGTAGTGGTTACGGCAAGTTGATCAAGGAACCACCCCACTCACCGTACGCGGACAAGTCCTTCGAGGACGAGCTGCTAGAGTCGCCCCATGGTGGCGGCGGCGGCGGCTTCGGTGGCGGCGCTGATCCACGGCTCGCCTCGTACGTGCCGCAGCATCAGCAGCAGAAACCGGAGTGGAAGCGCTACAAGCAGTACACCCGGACGGACATCCTGAACGCGATCGACTGCGTGCGGAAGGGGATGAGTGCGCTGCAGGCGTCGCGCAAGTTCGGTGTCCCTTCGCGCACCCTCTACGACAAGGTGAAGAAGCTGGGCATCACGACGGGCCGTCCGATTAACCGGGCCCTCAAGCGATCGCCCAGTTCCGGTGGCAGTCCGGCTCCGTTCCCGTACGGATTGAGCGGGACGACGCACCACCCGCACAGCCACATGTTCCCCGGTGGCACGGGGGGTGCCGGTGCACCGGGTGaccctcaccaacaccaccaccagcaccaacaccagcagcttccgtcgcagtcctcgcagcagcatcagcagcaggatgacgacgagtcggggccatcggcggcagcggccgcggcagcagcagccgccgcagcggccgcagccctcgcccatcatgAAGCGGCCGGGCGGATGATTAAGCTGGAGCACGGCAGTCACCACGGAGGGTTGCCACCGACGATACCACACCCGGCGGCCGCACTGCTCGACCCGTCGTTCCTGCAGCAGGCGCTGGAGGCGCGTGGTGGCGACATTGCGGGGCGCGAGGCACTCCACGCGATGGCGTTTGCCGCGGCCGCCCATGCCGCCGTGAACGGGATGAGCACGTCACCCGGAACCCACGGCACCGCCCGCTCACCCAGCCCGAACGTCCTCATGAAGTACATGCGCTCCGTTTCGATGAGCTCCCCGGAGGATGCGGCCGATCTGCATCACCATGGGGGGCACCACCACCATCACCACGGTCACCACCATCATGGGCCGCACCCGGATGAGGTACCCGGTGACCACGGCCATCACCATCCGGCCGGTGACCGGCACCATCAGAATGGCGGCCGGCGGCGGGATGCCCTTGCCGACGAACTGCCGATGGAGCAGGACTCGATCGACGAGACCGGCAGTGAGTGTGGTGCCGGGGGTCGCGCGTCCTCGAGTGGTGCCGGCGGCGGCGGGGTCGGTCCGGACGATCACGTGGAGGACCTCTCGATGGGCCCCAAACGCGACTCGTCCGAAGAGCGGCGCGGTCTCTCGCTGTCACCCGTCAGTGGCGGCCACGTTGTGCGCCGTCTACCGTCAAGGTCACCGTCTCCCGCGCCGCCACCACCACCGCCACCAGTACCCCAACAGCCAGCACAACAAGGGGTCATAGTGCCTGGGCCGGGCAAGCTAAAGGAGGACTACAACCTGGCCATCAAGCGCGAGATCATGGCCAACGACAGCAGCAACGCGGTCGGCCCCACGACGGAGTCTTCGTAG
- Protein Sequence
- MGSSEGQTYCLRWNNHKSNLVEILFALIKMECYVDCTIYVDEQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQEFEMRALLEYMYTGEVSVTQAQIPRIMKIAEQLEVKGLYDMADLKGGGGGGGGGGIGGRFDIDHHQHQLLQNHHHRDPATMLLASNNNYNKAGSGAGHCSSAAASSSSAFQSAPSPGAIATSSTATNVVSQAHSSSSSPPCTTYKSPYSSLYSRSPGAVERDREREERSRDRSASFSHSTTTPTTSSPHAASSSGAGAIATTIQQIGGSVAGGGASTSSSSAAAAAALAAGWPALGAQIPVTLAQTQLHSMLSSAYDSSTDMNPLKRKKLQSMSSMMRDTPILRNVLAQANPPDSSQPLVGGSPSSAAAAAVATIQTGSLHLKGSGGGGAGSGVCGSGVQEHPERPSSHHSNGSGYGKLIKEPPHSPYADKSFEDELLESPHGGGGGGFGGGADPRLASYVPQHQQQKPEWKRYKQYTRTDILNAIDCVRKGMSALQASRKFGVPSRTLYDKVKKLGITTGRPINRALKRSPSSGGSPAPFPYGLSGTTHHPHSHMFPGGTGGAGAPGDPHQHHHQHQHQQLPSQSSQQHQQQDDDESGPSAAAAAAAAAAAAAAALAHHEAAGRMIKLEHGSHHGGLPPTIPHPAAALLDPSFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGMSTSPGTHGTARSPSPNVLMKYMRSVSMSSPEDAADLHHHGGHHHHHHGHHHHGPHPDEVPGDHGHHHPAGDRHHQNGGRRRDALADELPMEQDSIDETGSECGAGGRASSSGAGGGGVGPDDHVEDLSMGPKRDSSEERRGLSLSPVSGGHVVRRLPSRSPSPAPPPPPPPVPQQPAQQGVIVPGPGKLKEDYNLAIKREIMANDSSNAVGPTTESS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00094584;
- 90% Identity
- iTF_00094584;
- 80% Identity
- iTF_00097174;