Acru006364.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anopheles cruzii
Gene Symbol
lolal
Assembly
GCA_943734635.1
Location
OX030879.1:58848745-58866457[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.5e-17 4.9e-14 51.6 0.0 2 45 655 699 654 699 0.95

Sequence Information

Coding Sequence
ATGATGTCTGTGCagcagtactgtctccggtggaacaaccatcagccgaacttcatctcggtcttctcgacgctgctgcacaatgagagcctggtcgacgtcacgctggccgccgaagggcgccaactgcaggcgcacaaggtcgtcctttcggcctgcagctcctactttcagtcactgttcaccgccaatccctgccagcaccccatcgtgatactgaaggacgtccagtacatcgacctgaagacgatggtggactttatgtactacggtgaggtgaacgtgtcgacggagcagctgccgcaggtgctcaaaacggccgaaatgctgaagatcaagggcctggcggagatgcCGGACGCGTCGGCCGTCTGCAAGGCGGACCTGAGCAAGCTGGACCCGTCCGATCTGATACAGGGAACGAACGTGGTGTCcggcgcgaccggcgaagcgatatgggccagtgcggaatctcagcaacagcagcagcaacagcagcagcagcaacagcagcagcagcagcagcagcaacaacagcagcagcaacagcagcagcaacaggcacaacatcatcagcaacaacaacaagcgcagcagcagcaacaacagcagcagcagcaacagtaccatcatcaacagcagcagctacaccagcagcagcctcagctgcgaaggtcaccctccccaacgacaaacatgtcacccgcggcacgacggaagcggttacggaagacctcgaccggttcgggttctctgtccacggagcggttgcagcagcaacagcaagcggcagccgtcgcccagcagcaggctgcagcggctgctgcggccgcggcagccgccgctgccgctcagcagcaacagcagcaacaacagcagcagcagcagcagtccgacgagcacgggtccagcacggacggtacgctcaatctcgtgccacacctgcacattcagcaacaggtcgacaacatatcgtacaccacgggtcacggggcgctagcgctgggtgcggccactgcggctgcggccgctgcagccgctgcagccgccgccggcaacaacattcgcatcatcaaggagagccccagctcggacgtggaccagcagcagcacgagtcgtcgcaggaaagtgtcgacgagacgggccaccatattcccagcatcaTCAAAACGGAAGACCTCAGTGGGGTCACGCAGGCCATACCGATGGACATCTCGACGACACCGACGACCGTGAACATAACGCAGTCCCAGACGCAACACACCGGTGGGCAATGGACGGTAATCGATACGAATTATCCGcggtttggcattgcgtcctgtcagacgaatttaggactgcagcaacagcaacaccagcagcagcagcagcaacatcagcaggtacaacaaaccgtgcagcagcagcaacaacagcaccatcagcaacaacaggccagtcagcagcaacaccatcagAGCGATAGTttaggcggtgctggaaatgcaaacaacggcacggtgaacggtggcgccggaggggccggcggtgcgcccaatgccaccggcaatgCGATCTCCAACGCGTCGGCCAGCAACTCGAACGCGACCACACCGCAGCCGACGACGCCGGTGCAGATCTATCAACATCCGTTCTCGCCGCAGATCATTTCGGTCAACCCGAACAGCATGGTCAACAGCTACCAGCAGTCGTCGAACATTTCGACCCCCACGTCACCGCAGGCCGGCACCGAGACGGCCCTGGTGTACAGCACCGGCACCCCGAATCAGTCGCCGCTCGGGACGACCAGTGCGGGGCAGGCCGGCCAGGCCGGCAACGCAGGCAACGGGACCGCCGGAACGGCTGGTAACGGTACCGGCGGTAACGGGGCCGGCGGGGCCGGTGCAACCGGAGCGGGAGCCGGCGCAACCGGCACCGTGGTGCAGCCGGTCAAGCGGAAACGATCCGTCAACCCGCAAGGGGACGAAAACTTCCTGCGAGCGCTCGAGGCGGTCCGATTCGGGGGCATCGGGTTCTGTAAAGCGGCTCGCCTGTACGGGGTCAACAATCGAACCCTGTGGCTGGAGTACAAGAAGCGAGGCTACCCGATCAGCCGGCCCAGCATCAAGAATCGCATCAAGCTGGAACCGAACATATCGCCTCCACcgacggcgaccacgccgcccggtgatgagaacgcctcgatggaacactacgatacggccctttcgtcgccggcactgaacatgtccctgcagcagcagcaacaggcggcccagcaggtccagcaacagcaacaccaagccacccagcagcaggtgacggccgcgcagcagcagcaccagcaaacccagcagcagcagcagcagcagcaaccgcaggcgaatgacaacaccaacgtggcggcggccgcagcggcagctgcagccgtggcggcgtcctccacgcccctgatgtgtccgccgcacggcCATCCGATGGGCGTGATGGGCTTTCTCGATACCCGCCACGTAGACTTTACGACCGCGGCCGGCATCCACCAGATGTCCCGCCAGCGGTACCCGGACACGGCGACCGTCAACATGAACACGGGCGCCGTCAACTTGCAGGGCCTAAACTTTAACTCCATGTAA
Protein Sequence
MMSVQQYCLRWNNHQPNFISVFSTLLHNESLVDVTLAAEGRQLQAHKVVLSACSSYFQSLFTANPCQHPIVILKDVQYIDLKTMVDFMYYGEVNVSTEQLPQVLKTAEMLKIKGLAEMPDASAVCKADLSKLDPSDLIQGTNVVSGATGEAIWASAESQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAQHHQQQQQAQQQQQQQQQQQYHHQQQQLHQQQPQLRRSPSPTTNMSPAARRKRLRKTSTGSGSLSTERLQQQQQAAAVAQQQAAAAAAAAAAAAAAQQQQQQQQQQQQQSDEHGSSTDGTLNLVPHLHIQQQVDNISYTTGHGALALGAATAAAAAAAAAAAAGNNIRIIKESPSSDVDQQQHESSQESVDETGHHIPSIIKTEDLSGVTQAIPMDISTTPTTVNITQSQTQHTGGQWTVIDTNYPRFGIASCQTNLGLQQQQHQQQQQQHQQVQQTVQQQQQQHHQQQQASQQQHHQSDSLGGAGNANNGTVNGGAGGAGGAPNATGNAISNASASNSNATTPQPTTPVQIYQHPFSPQIISVNPNSMVNSYQQSSNISTPTSPQAGTETALVYSTGTPNQSPLGTTSAGQAGQAGNAGNGTAGTAGNGTGGNGAGGAGATGAGAGATGTVVQPVKRKRSVNPQGDENFLRALEAVRFGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKNRIKLEPNISPPPTATTPPGDENASMEHYDTALSSPALNMSLQQQQQAAQQVQQQQHQATQQQVTAAQQQHQQTQQQQQQQQPQANDNTNVAAAAAAAAAVAASSTPLMCPPHGHPMGVMGFLDTRHVDFTTAAGIHQMSRQRYPDTATVNMNTGAVNLQGLNFNSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00105905;
90% Identity
iTF_00097156; iTF_00094408; iTF_00094564;
80% Identity
iTF_00097156;