Acru004327.1
Basic Information
- Insect
- Anopheles cruzii
- Gene Symbol
- retn
- Assembly
- GCA_943734635.1
- Location
- OX030879.1:35738317-35751189[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.3e-19 7e-16 58.2 0.0 18 89 19 88 11 88 0.93 2 3 8.6 9.6e+03 -3.1 0.1 15 38 156 185 147 185 0.55 3 3 7.7 8.6e+03 -3.0 0.3 46 62 434 450 404 470 0.52
Sequence Information
- Coding Sequence
- ATGGGGGGAGCTGTTAATCGACCGAACCAACGGCAGTCGGAAGGAATTCCAAGAACGCCAATCAATCGTCTGCCGATCATGGCCAAATCGGTGCTGGATCTGTACGAGCTGTACAACCTGGTGATTGCCCGCGGCGGGCTCGTCGACGTGATCAACAAGAAGCTGTGGCAGGAAATCATCAAGGGTCTGCATCTTCCGTCGAGCATCACCAGCGCCGCGTTTACTCTGCGCACACAGTACATGAAGTATCTCTACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACGCCCGGGGAGCTGCAGGCGGCCATCGATGGTAATCGGCGCGAGGGTCGTCGTTCGAGCTATGGCCATTTTGATTCGCCGTCGGTGCAGCGTTCGCCGATACCGCAGAGCATCTCGCAATTGCCGCCCCTGTCGCTGGTGTCGCACGTCAACCAGCAGCAGCAGCAGCACCATCACCACCACCGGCTACTGCCGCCGGTCGGGCAGCTGCCGAACATTCTGCCGGCCGAGTTCGAGCAGCGCATGCTCGACTACATCAAGCTGTTCCAGCCGAAGGAGATGGCCCGCGCCCAGAGCCCGGACCAGGCCAGCAAGCTGTCGGCCCTGAACGCGCTCGAGATCTCGCGCGTCGCCCTGTGGAACATGTACAATCCGGCCCCCAACAGCCCGCCGAACTCGCTCAACACCAGCCCGGAGAACAACATGCAGAGTGCGCTCGATCTGTCGGAATCGCCGGACCACGCCATGGCGTCGATCAAACGGGAACGGGCGGAGCATCATCCGGTTGACTTTAGTGACCCGCGCGACTACAGCACCGGACTACCGCCGCCGGCCAAGCGCAGCCATCTGGGTCACCAACACCATCACCACAGCCGCTCGCTGACGCCGCTCAAGCTGCACAATTCGTCGCACGACGAGGACGAAGTCCGGTCCGGTTCCGGCACGCCGATCAATCTGCGGGAAAACGGAGGCAGCTCCAGTCTGCACCATCACCACCTCCACCACCACCATCACCACAATCCCGACGATGAGGATTCCCAGGGTGAAGATTCCCAGGAGGGGCCGACGGAGGAAAACAACATGATTCACCATCATCCGCTGGCCCTTAGTCTGGCCGACCACCATCACCGCGAACGCGAGCGAGCTCACCAACAGGTGGCAGCACATGTCGCTGCCCGGTTCGTCGATAATTTTGGACACGAAGCAGCGCCACCTGAAGCAGAAAAGCTGAAGCAACACATGGCCACGCTGGATCTTAGTATTTTGGACCGCGAACGGCTGCGCTGCGATAGTGCCGATAAGCTGAAGCAGCGTCAACAGAAGCAGCAACAGCAACAGCAGCAACAGCAACAGCAGGAGCAGCAACACCAAAGGCAACAGCAGCAGCAGCAAGCATCGAAGCTGGCGAAGAACGGAAATGGCGATCACCGGCTCAGCTTAACACCGGACAGCGAGTTTCACCACGCAAAAACCAGCTCGGCGGCGACGGCACCGGCAACCGGTGCCGGTGGGTCTGGTCTGCCGGATCCGTTCAGCTCGCCGCTCGGTATCACCGGCATGCAGTTCAAGCTCATTAGCCGAGGTGATGCCAGCAAGGGCGACCAGAAGCTGGTGGTGACGATGGAGTTTAATGGCGTGCAGTACGAGGGTGTCCTGTTTGCCAACCCGATGCCCCTGTCCTCGACCACCGCACCGTCGGCATCGACACCACCGTCCTCCTCCATTTCGGCCACATCCGCCTCACCCATCGGATCGCTGGTGTCGCCGGTGAAGACTGCCACGATTTCGGCGCTGGACGAACGTGGCGAGAGTGGCGGCGATGTCTCCGGTTCCGCCGACCCTGCATCCGCAGCCCTCAGCAGCAACACGAGTGGGGCACCACTAATGGCCCACAGTTCCCCGGGTGCGGTGTCCTTCTGTAGCACTCAGAAGACCGAAAGCGGTGCTCCGGCGATGGTTCCGATGGCGTTAGTCGCTCCCGGAAGCGGCAGTCCCACGGCTGGATCGCTGATGTCGTAA
- Protein Sequence
- MGGAVNRPNQRQSEGIPRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPGELQAAIDGNRREGRRSSYGHFDSPSVQRSPIPQSISQLPPLSLVSHVNQQQQQHHHHHRLLPPVGQLPNILPAEFEQRMLDYIKLFQPKEMARAQSPDQASKLSALNALEISRVALWNMYNPAPNSPPNSLNTSPENNMQSALDLSESPDHAMASIKRERAEHHPVDFSDPRDYSTGLPPPAKRSHLGHQHHHHSRSLTPLKLHNSSHDEDEVRSGSGTPINLRENGGSSSLHHHHLHHHHHHNPDDEDSQGEDSQEGPTEENNMIHHHPLALSLADHHHRERERAHQQVAAHVAARFVDNFGHEAAPPEAEKLKQHMATLDLSILDRERLRCDSADKLKQRQQKQQQQQQQQQQQEQQHQRQQQQQQASKLAKNGNGDHRLSLTPDSEFHHAKTSSAATAPATGAGGSGLPDPFSSPLGITGMQFKLISRGDASKGDQKLVVTMEFNGVQYEGVLFANPMPLSSTTAPSASTPPSSSISATSASPIGSLVSPVKTATISALDERGESGGDVSGSADPASAALSSNTSGAPLMAHSSPGAVSFCSTQKTESGAPAMVPMALVAPGSGSPTAGSLMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -