Acou000800.1
Basic Information
- Insect
- Anopheles coustani
- Gene Symbol
- lov
- Assembly
- GCA_943734705.2
- Location
- CALSDV020000337.1:330041-330664[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-11 7.5e-08 32.1 0.1 17 44 1 28 1 29 0.95
Sequence Information
- Coding Sequence
- ATGACCACCAGTCAAGCATCGCGGATCTTCGGCATTCCCTACAACTCGCTTCTTATGTACGTGCGAGGCAAGTATGGGAAAAGCTTAAAACTGGAGCAACTTAGGAAAGATTGCATCAGTGGACCACCAATCGAACTACTGCAGATGGGAGTCggaaataacaacaacaaggaTAAGAAAGAAGCAAAGGACAATGAACTGCATCATCTCCACTCAGCAAGTGGAACCGGTCAGGAAGGAAACAGTGCCCAGAACTGCGGAAACGGAGGAGGTGGCGGTAGTGGCGGTCATAGTTCCAGCGATCTACGAGGACCTAGATCAGCATCGTCGGAGCCGGAACTTCTATCAAGTCCTAATCCGTTGTTTAATCCATTTCCCGGAGGCTTCTATCCAGATTTTCCGGGAGGGTTCCCGGGACTTCCTCTGAGTATGCTTAATCTCCTGCCTCCAGAACGGCATCAGCCACACTCACTAACAATGGGCATCGAAGAAGACTGTAAAAGTGATCGTTCGAAGCAGTCAATGGATGAAGATTTTCCACAACCACTAGCTCTCAACCGACCCTCGTCGGACCAGCTAACGGACAGTCGTAGAGAGATATACCAGCAGAATGGGCAGGACTAA
- Protein Sequence
- MTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIELLQMGVGNNNNKDKKEAKDNELHHLHSASGTGQEGNSAQNCGNGGGGGSGGHSSSDLRGPRSASSEPELLSSPNPLFNPFPGGFYPDFPGGFPGLPLSMLNLLPPERHQPHSLTMGIEEDCKSDRSKQSMDEDFPQPLALNRPSSDQLTDSRREIYQQNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00109060;
- 90% Identity
- iTF_00109060;
- 80% Identity
- iTF_00109060;