Basic Information

Gene Symbol
Kdm5
Assembly
GCA_943734705.2
Location
OX030900.2:74498574-74505080[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-25 3.1e-22 78.9 0.0 2 89 212 295 211 295 0.94
2 2 9.5 1.4e+04 -3.4 0.0 6 41 1001 1038 998 1049 0.78

Sequence Information

Coding Sequence
ATGAAAAGCAAATCTAGAACTTCTTTAACGAACGGCagtggtagtagtagtggCAGTGGCAGCGATAATTACACCAACGGTAGCAACTATGCGACCGTGGCGACCGCAGGATCATCGAGCACAACAGTGGCCGGATCCGGTGGTGGGACCATGAACGGTGGAACGGGCAAATCTCAAACCGGAAGCCCCGGTTCGGGAGGGGCGTTGAATCATGGCAGTATGCAGAGCAGCTCACCTGGCGGTCTGTCGGAAGTAGCGCCGGACAGTATGGATCCGCTACAGCCGAATAACCACCATCACAGTAATCATCTGCACAATCGCAACCATCTgtatcagcagcagcagcaataccATCAGAAACAAAGTGGAATCAAACCGCATATCTCGCTGGACAAGTGCGATGAGTTTCAGTTCAAAGTTCCACCGGAGGCCCCGGTGTTCGAGCCGTCGGAGGAGGATTTCAAAAACCCCCTCGTGTACATCAACAAAATACGACCGATGGCAGAAAAGTATGGCATCTGCAAGATTCGACCGCCGAGCTCCTGGCAGCCCCCATTCACTGTGAACGTCGAGAAGCTTACTTTCACCCCGCGCATCCAGCGGCTGAACGAGCTGGAAGCGGAAACGCGCATTAAGTTGAACTTTCTCGACCAGATCGCCAAGTTCTGCGAGCTGCAGGGTACGAGCCTCAAGATCCCGATGGTGGAACGGAAACCGCTCGATCTCTACACACTACACAAGATAGTGAACCAGGAGGGTGGCCTGGAGGTGGTTACGAAGGAGCGCAAATGGTCGAAGGTGGCCTGTCGGATGGGTTATCAGCAGGGGAAAAGTGTTGGCTCGAACCTGCGCTCTCACTACGATCGGCTGCTGTATCCGTTCGATGTGTACCGCTCGGGAAAGGTGGTCGATTTGGCGAGCATCGATCCGGAACCGAACGAAGATTGCGAGTACGAACCGCACTGCATTGAGTCGCGCCAGCAGGTGCAACCCCCGATGACAACGGCTCGTCGTTCGCAGCGTTTTGCCCAGCAGCAGAGCAACAGCAAACAGTCGACCTCCGGTGGCAGCAGTGCCGGGGGAAGCATTCGCGGTTCGTCGGAGGAAATGTCGCCCGGGAAGAAGGAACTGCGCCACCGGAGTATGCTGGAGTTTGCCAGCAAATTGGCGGCCGCCGCTCGGGAACAGGCGGCAACGAACGGAGCGAAGGATGAGAAGGCGGCTGGCCCTGGTGGGGCCGGCCCCAGCAACTACGACCCGATGGCCAAGTACATCTGTCACATGTGTAACCGTGGCGACGTGGAAGAATCGATGCTGCTGTGCGATGGTTGTGACGCATCGTACCATACGTTTTGTCTGATGCCACCGTTGCAGGACATTCCGAAGGGCGACTGGCGCTGCCCGAAGTGTATCGTGGAGGAGAACTCGAAGCCAGTGGAAGCGTTCGGCTTCGAGCAGGCACAGCGTGAGTACACACTGCAGCAGTTTGGCGAGATGGCCGATCAATTCAAGCTGAACTACTTCAACATGCCCGTGCACCTCGTACCGACCGAGCTGGTGGAGAAGGAGTTCTGGCGCATCGTGTCGTCGATCGATGAGGATGTCACGGTGGAGTATGGGGCCGATCTGCACACGATGGATCATGGCAGCGGGTTCCCGACGAAGTCGCTACCCTACCTGACGCAGAGCGATCAAGAGTACGCCGAGTCGAGCTGGAACTTGAACAATCTGCCCGTGCTGGATGAGTCGATATTGGGGCACATCAATGCAGACATCAGCGGCATGAAGGTACCCTGGATGTACGTCGGTATGTGCTTCGCGACGTTTTGCTGGCACAACGAGGACCACTGGAGCTACTCGATCAACTACCTGCACTGGGGCGAGCCGAAGAcgtggtacggtgtaccggGCAGCAGAGCGGAAGAATTCGAGCTGGCCATGAAATCGGCCGCCCCGGAGCTCTTCCAATCGCAGCCCGATCTGCTCCACCAGCTGGTGACGATAATGAACCCGAACATTCTCATGAACGCCAACGTGCCCGTCTACCGGACGGATCAGCATGCCGGCGAATTCGTTGTGACATTCCCACGGGCGTACCATGCCGGTTTCAACCAGGGGTACAACTTTGCCGAGGCGGTCAACTTTGCGCCGGCCGACTGGATGAAGATGGGCCGGGAGTGTGTCAATCACTACTCGAAGCTGCGCCGGTACTGTGTGTTTTCGCACGACGAGCTCGTGTGCAAAATGGCGCTCGAGCCGGATCGGTTGAATCTTGGAATTGCGACCGCGTGTTACATCGACATGGCAGAGATGGTGGACACGGAGAAAAAGCTGCGCAAAAATCTGCTGGAATGGGGTGTATCAAATGCTGAGCGGGAGGCATTCGAACTGCTCGCCGACGACGCTAGGCAGTGCGAAATCTGTAAAACGACCTGCTTCCTGTCCGCGGTTAACTGCAAGTGCAGCAAGAACCTTGCCTGCCTGCGCCACTTTGCCGAGCTGTGCGAGTGTCCACCCGACAACCACACACTTAAGTATCGCTACACGCTCGACGAGCTGCCACTGATGGTACAGAAGCTGAAGGTGAAGGCCGAATCGTTCGAAAAGTGGCTGTTTCGGGTGCGCGACGTGCTCGATCCGTCGGTCGCGAGCAGTATCACGCTGGAGGAACTGCAAAGTATCGCCCACGAGGCGGAATGCCAGAAGTTCCCGAACAGTGTCATCCTGGAGCGGCTGAACCTGTCGATACTGGAGGCTCAGAAGTGTATCACGGTCATCCAGCAGCTGGACATCAACAAGATTCGCACGCGCACCCGTAACTCGCTCGAGTGTGCCAAGTACAAGCTAACGATGGACGAGCTGGAGCTGTTCATCAACGAGATCAACAATCTGCGCTGTGTCATCCGCGAGGGTGACAGCGTGCGGGAACTGCAGCGGATCGGTCTCGAGTGGTTGCGGCAGGCGGACAAGGTGTTGAAGCTACGCTTCAAGGACACGAACGTGCAGCAACTGAATCAGCTGATCGAGGAAGGCAACGCGCTGTGCATCGAGCTGCCGCAGATCGCGGAACTCAAGGATCGGCTAACGCAGTACAAGTGGTACCGGCAGGTGCGCACGCTCCGGGAGAATACGATCGACCGGCTGTCACTGGAGGAGATCAAGAAGCTCGTCAACGAGGGGATGCGAATACTACCGCATACAGTATTAGAGAAGGAGTTGTCTCAGTTGCACGGCATCATGCTACAGGTTGTCGATTGGGAGCAGTCCGCCAATCAGTGCTTCAAGACGGAAACGCAACACAAGATCAGTGAAATTGACAGCCTGCTCGAGCGGGCACACAATATCGAAGCATTTCTTCCCCTGGCCAGTCAGCTGAAGGACGCACTGCACAAGTCCAAGGAGTGGCTGCACGCGATTGAAACGCTCGAGAGCAGCAAAAACTACAACTTTTTCCACACCCTGCAAAACCTGGCGAACCGCGCGAAGCTGCTACCATTGGAGATGGAAAGCAAACTGCTGTGTGAGACGATTCTCGGCACGACAACCGCGGGCGGCGGCTGCTACAATCGGAACGGGGGTCAGCTGTTGCTGTTCAACTCGAAGGGTTTCATCGGCCCGAGTGGTGAAGATCGGCGAACAAAGTCACCCACGTCATCATCCGTCGCGGTTCCGtcttcgtcctcgtcgtcggccTCCAAGAGGAAGCGTTACGGTTCGATCTCGAACCTGGACGATCCCCCACTAGCGGACAGCATGGAGACGAttatgaaaaagatcaaagaAGAAAGTAACATCGGCGAGCACGATAAGCGTTTGCTGAGGGCTCAGTTGCTTCGGAATTGGAGCGATTCGGTGGGCACCCCTAATGGGGTTCTAATGCCGGGAAGTTTTGATGGTTCTGCGCAGATCCGGGACCATTCCCGTCAACCTGCGAGCAACGGTGTGATCTACCATTGCGCCAAATGCCACGAGATGGTGGCGAAGGCGAACGTTCTACGGAAGTACCATCATCACcggcagcaccaccaccactgtcGTCACCATGAGCGGCACCACCGAACGACGACTGCCCGGCAAGGACAACGGTCGCAGGAGCAGAATGGAGGTGAAAGTACTGTCGGTAGTCTCGATCAGCTGCTCGCGATCAAAACGCTAAGTGAAGAGGAtttccattccgatgtacGAGCCGCCGGTGGTAGTACGGCCGTGGGAAGCAGTTTCGACGATTTCGTGCTGAAGCATGGCGACCAGTTCGAGGAAGAGATGGACGATGAGGAGGAAGCGGACGTAGCCGATGAGGTGAAGGCAgaagaggatgatgatgacgatgacgatgatgacgacgacgatggcgacgataACGTTGACAATGCTCGCGGGGGCGCTGCCGGTAATAAGCTTTCTGGGCAGAATGGATGCCACAGTTGCAAACCACCGGACGACGATAAGCCTGGGAGTGAGTTGCGCAAGTCCTTACTAAACGCCGCCGGTCCTTACGAGGGTAAAATTAAGACGGAACCTATCGACGGGGACGAGGTCACTGTAAAGGTGGAGGATGATCCGATGTGCGACGTACGTACGGTGAAGGAGAAAGAGGAGGCTAAATCGCGGAACGGTTCGCGAGCATCAACACTTCAGTGTCCCGAGAGTACTAGTCAATCGTTTGAAAATGTGCCCTCTAGCGGCAGCAGGAATACTAatagtaatagtagtagtagtggtagcggtaatagtagtagtagtagcaacaacagcaacagcaatgcGAACCGTCAACCGAACGATCGAGTAAAGCAGGAGCCCCAACCGAACCAGCATCATTCGACGGACTTATGA
Protein Sequence
MKSKSRTSLTNGSGSSSGSGSDNYTNGSNYATVATAGSSSTTVAGSGGGTMNGGTGKSQTGSPGSGGALNHGSMQSSSPGGLSEVAPDSMDPLQPNNHHHSNHLHNRNHLYQQQQQYHQKQSGIKPHISLDKCDEFQFKVPPEAPVFEPSEEDFKNPLVYINKIRPMAEKYGICKIRPPSSWQPPFTVNVEKLTFTPRIQRLNELEAETRIKLNFLDQIAKFCELQGTSLKIPMVERKPLDLYTLHKIVNQEGGLEVVTKERKWSKVACRMGYQQGKSVGSNLRSHYDRLLYPFDVYRSGKVVDLASIDPEPNEDCEYEPHCIESRQQVQPPMTTARRSQRFAQQQSNSKQSTSGGSSAGGSIRGSSEEMSPGKKELRHRSMLEFASKLAAAAREQAATNGAKDEKAAGPGGAGPSNYDPMAKYICHMCNRGDVEESMLLCDGCDASYHTFCLMPPLQDIPKGDWRCPKCIVEENSKPVEAFGFEQAQREYTLQQFGEMADQFKLNYFNMPVHLVPTELVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSLPYLTQSDQEYAESSWNLNNLPVLDESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSRAEEFELAMKSAAPELFQSQPDLLHQLVTIMNPNILMNANVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWMKMGRECVNHYSKLRRYCVFSHDELVCKMALEPDRLNLGIATACYIDMAEMVDTEKKLRKNLLEWGVSNAEREAFELLADDARQCEICKTTCFLSAVNCKCSKNLACLRHFAELCECPPDNHTLKYRYTLDELPLMVQKLKVKAESFEKWLFRVRDVLDPSVASSITLEELQSIAHEAECQKFPNSVILERLNLSILEAQKCITVIQQLDINKIRTRTRNSLECAKYKLTMDELELFINEINNLRCVIREGDSVRELQRIGLEWLRQADKVLKLRFKDTNVQQLNQLIEEGNALCIELPQIAELKDRLTQYKWYRQVRTLRENTIDRLSLEEIKKLVNEGMRILPHTVLEKELSQLHGIMLQVVDWEQSANQCFKTETQHKISEIDSLLERAHNIEAFLPLASQLKDALHKSKEWLHAIETLESSKNYNFFHTLQNLANRAKLLPLEMESKLLCETILGTTTAGGGCYNRNGGQLLLFNSKGFIGPSGEDRRTKSPTSSSVAVPSSSSSSASKRKRYGSISNLDDPPLADSMETIMKKIKEESNIGEHDKRLLRAQLLRNWSDSVGTPNGVLMPGSFDGSAQIRDHSRQPASNGVIYHCAKCHEMVAKANVLRKYHHHRQHHHHCRHHERHHRTTTARQGQRSQEQNGGESTVGSLDQLLAIKTLSEEDFHSDVRAAGGSTAVGSSFDDFVLKHGDQFEEEMDDEEEADVADEVKAEEDDDDDDDDDDDDGDDNVDNARGGAAGNKLSGQNGCHSCKPPDDDKPGSELRKSLLNAAGPYEGKIKTEPIDGDEVTVKVEDDPMCDVRTVKEKEEAKSRNGSRASTLQCPESTSQSFENVPSSGSRNTNSNSSSSGSGNSSSSSNNSNSNANRQPNDRVKQEPQPNQHHSTDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00093919;
90% Identity
iTF_00108921;
80% Identity
iTF_00108921;