Basic Information

Gene Symbol
RERE
Assembly
GCA_016097175.1
Location
CM027927.1:42476087-42488978[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-08 1.5e-05 24.7 0.3 2 45 101 145 100 146 0.92

Sequence Information

Coding Sequence
ATGGCAACATTACCAGACTATCAACCGATCGAGAACTACCGCTCCGAGGACGATGAAGATCGCGACCTAGAGGATCCAAGATGGACACCCGGACTGTACATTGATAATGATTTGTTGATGTACCTGACCGCCGCTCGTTCAATATCCGCCTTTCAGGGTATGTGCGAGGAAGATGGTTGTATGGCAGCTAGTCGTGACGATACAACTATAAATGCATTTGATGTTTTACACGACTCAGGATACGACGCCGGCAAAGCCCTAGAAGCACTGCTAAAGTGTCCCGTGACGAAGGGCATCGAGAAGAAGTGGACCGAGGAGGAAACGAAACGCTTCATCAAGGGTTTGCGACAGTTTGGGAAGAATTTTTTTCGCATCCACAAAGACCTGTTACCACATCGGCCAACGCCGGAATTGGTAGAGTTTTACTATCTGTGGAAGAAGACGCCGGGGGCAAACCAGAACCGGCCCCACCGCAGACGACGGGCGAGCTCGCTCCGACGGATGCGGACCCGCCAAAAGCCAACGAAAGAAACGAATGCTACCAATGCGAAGCGGCCCAAGCGGGGCGGTACGGAGACACCGGAGCAGCAGACAGCGACCGGCACTGCCGCAGCCGCAGCCACTGCTGGCGCCGCAGCCACGGCGGGCGGTGGTGCGCCCAACACCGGTGGTAGCAGTGGGAACGGAGCGAGCGGAAGTCTGGACATTGGCCCGACGGTGGACGGTGTCGGTGGCAAGCATGGCGGTTCGCAGACCGGCAGCAAAGGCAGCAAGTCCGCTGGACCGGGCAAGACGGAAACGACCACCCCGAGCAAGGGCAAGAAGCGCTCGAACGAGCAGGAGGTGGACGGAAGCGATGAGAAGGATGGACAGAAGCGCAAACGCTCGGACAGCCCGGCTGAAAGCCTCACCACCGACAGCCGGCCCGGCTCCGTACTGGACGAGATGGAATCGGTCAGCGAGGCGGCGACGGAAACGAGCATCGGTACGCGCACCACCGGCACGCCGACACCGGTCGGACACGAGCGGTTGCAGGGCGCAAACTCGGTCAGTTCCGGTACGGGCAGCGGCGCAGGAGCCGCTGCCGATGGCAGCGTGCCAACCGCGAAGGACGACGAGAAGGATCCACTGTCGCTCGGACCACCGCTCGCCGCCGAGCCGATGGTTACGGAGTCGAACGAAAACAGCAGCAGCAGCAATACGACCACCTCGACCGTGGCCAAGTCCTCGTCGGGTGGTTCGGAAGACAAGGATGACGATTCGAACGCGGGTGCTACGGGTGCCGTTGTTGCGTCGGCGGTAGCAACCGTTCCAACGGCCGCAGACACCGCCAAGCTGCCCGAAACGGAAGACATCTCTCCGCCGTCGACGGCGGCCACTACGCCCGTCGCAACGCCGGCCCCACCGACCGCGGGCGCATTGCTACCCGGCGCCGATGGCAGTGAACCGCCCCAGCAGGGAGTTGCTCCATCGTCGGAGGAAGCGGCCGCAGCAACCAACGGTACCAGTGTCAGCACAGCCGGCAGCGGCACCACCACCACGGTGGTGGAGGGCAAACCGTGCGTAAATGCGCTCGGACCCGCCCCGTCCAGCGACCAGGAGATGGCTTCGAAGCTGGCCAACATGAAACAGGAAGGTTCTGCCGCGACCGGACCTCCCACGGGCGCACCGGCCGGTTCAGCAGCAGCATCGGTCGACTTTAACTCCAAAGACGTGTTCATCAAGAAGGAACCGAACGAAGAGTCTGGTGCAGCTGCTGCGGCGGCGGCGTCGGCGGCCTCTGCCGGATCGTCCTCCGCGCCCGGAGAGCAATCCTCCGGCTCCGGTGTCGGTGGCGGCGCGGCCCCAACGAGTGGTGCCCCTAGCGAGCCGCAGGATTTGAAGCTCAAGATTGAGGTCAAGTCGGAAGCGAAACTGATGCCGGGCGGAGGCGCCGGTAGCAACGAATCGTCCAGTCAAGGTGGCGCCGCCCAAGGCCCGCCCGAGATGAAGTACGATCCGGAAAATCTCGTCATGAAACCGTACGAAAGTCACATCAAGTACGGTGGGCATCCGGGCGAGGACGGTATGAAGTACGGGGAGCACAAGTATGGGCCACTGCCACCGCATCATCAACCCGGACCGGGCGAACCGCCGGGCCTGAAGTACGGTCCACCAGGGCCGCAGGACGAGCCGCTCGAGTACGATATGAAGCGGTACCCGGCGCACGGTCCCCCACCGCCACCCAACCAGGATGGTGGTCCACTCCCGCTGAAGCTTGGCGGTGGTCCGCCCGGACCGCCGTCCGCTTCCGGAGCGCCGGGCGAACCACCATCCGGCGCAGGACCACCGCCCCACATGAAGCTGTCCCAGTACGCGCAGGATCTGACGGGCCTGAACCTAAAGTATCCGCCGCCGGACGAGCGCAGCAAGTTTGCACCGTCGCCCGCCTCGGACAGTGGCAGCGGCAGTGGCGTAGCGCCTCCACCCCCATCCGGTGTCGGTGGGCCGCTGCCGCTCATCCCCAAGAGCCACTATCCCGACCCGGCCCAGCTCAGCATGCTTCGGCAGCACTACGAGCACACGTTCAAGTACGATCCGATGGCGGCGGTCAAGTACGGACCGCCCGGAATGCCCCCGTTCGGGGCGGGACCGCCCGGCCAACACCACCATCCGCACCATCCGCTGGCGGGCGGCCTGCCCGGACAGCCGCAGTCACAGCCGCAAGATCTGAAGTACCTGCCGCCGGAAGCCATGGGCCCGATGAAGTATCCACCCTCCTCGGTGGCGAGCGACACGCCCACCTCGCTCAAGAACAACAGCTTCTCGGCGGACAATCTGCTGAAGAGCAGCTCGTCGAGCAGCAGCGGCGGCCCGGGAGCAAACGATGCGTCCAACCCGCTGGACGTGTCGGCTTCGGGGCGCCACGCCATCACGCCCAACCAGGACAGCCAGGGCAGCAACAGCAGCTCTCAGGCGACGCCCCTGCACGGCAGCAGTATTGCCTCGCCCCAGTCGGGTGGGCCTCCTCCCTCGCTACCACCGCACGGTGCTGGATCGTATCCACCGCCGCATGGACCACCGCCCCCGGGCCACCCGGGACATATCGTGAATCCGGGGCTGATGCCAACGTTGCTCGGCGCCGGCCCGAACTCGTCACCGGTACCACCAACGTCCCAGCCGGGTGGCGTGCATGTACCCCCCGTGCTCGGCGGTCACCCGTTGGCACATCCGGGCGGTGTCCCTCCACCGCAGCTGTTACCAACGCCGCCCGGTTCGGGCCCGTACCAGCCTAGCAATATGCACCGACCGGGCGGACCAATGCCACCCTCCTCGGTGCCGAGCTCGGTTTCGCTGGCCGTCTCGTCCAGCGGCAGCACTGCCCTCACCTCCACGACTGCATCATCCTCCTCCTCCACGGCGGTAACGTCCCATTCCCCTGCCCCGATGCGGCCCTCGTCCGACAATGGACCGCTGGGGCTGCAGCCAATGGCGCACCATCACCGGTCGGACCGGGACCGCGAACCGCCCCGACCCGGCACAAACGAGCTGCCGCCGACCCGCGCCTCTCCCATCAACTCGCTGCTGCAGGGAGTGCCGCCACCGCACGGCATGCTGCCCCATCCGCTGCCGCTGCACCTGGGTCACCCCGGCATGCAGCTACCTCCGCACCATCCGGCCCATCTGGCCGGTCCGCTGGTGGGACACGCCGGGCTGCTGCCGCCCTCGCTGGCGGCACACAGCGCCGGCCTGCCGCTGCTCGGCGGACCCACACCATCCGCGCTCGGCAGCCTGATGGAGGTGGCGGGCGCCGGCCGTCGCTCACCTTCGTCCGGGCCGGGCAGTCTGGCGGGTGGTCCGCATGGCCACCTGCCGCCCACATCAATGCACCAGTCGGTGAGTGCGCTGGCGGCACAGTCCCCGTCCACCCCGACCGGGGCCGGCGGTGGTGGACCGCCGTCCTCCTCGTCGTCCGCGCTGAGCCGGGCCAGCCCGAACGTGCCGCCGGGCGGACCGGGAACCCCGGGCGGCGGTGGCTACCCGGGCCCGGGCGGCCATCATCACCGATCCAGCTCACCTGCCAACTCGAACAGCTCCGGCCTGAGCCGGGGCAGCCCGATGCACCTGAGCCACCACCCGTCGACGCCGGGTGCGGGCGGTGCGGGAGGCAGCGGCAGCTCGTCCGCAGCAGCGGCGGCCGCTGCAGCTGCATCGGCCGAACGCGACCGCCAGATCATGCGCCAGCAGAGCCCCCACATGACACCACCGCCACCGTCCTCGTCCGCACCGTCGGCGGCGCTGATCTCCAGCCCGCTGAGCAAGATGTACGGTGGCCCCTCGGGACAGCGATCGCCGCCACCGTCCCACCCGTTCCGGCCGGGCGCATCGCCACCGGTCATACGACACCCCCAGATGCCTCTACCTCTGCCGATGACGGGCCCGATGGCGGGCATTCCCGGCTCGGTGATGCACGCCTCGCAGCCGTACCCGCTGATGCACCCGTCGCTGTTCAATCCGCACCATCACAACCCGTTCTACGCGCCGTACCCGTACGGTCCCGCCTACGGGCCCGGCTTCTCGTACATGAAGCCCGGCGGCTCACCCCTCGACAATCCGATGCTGCACGGGCACCCGACCGCGATACCGCCGCCCCGGCCCGAGGACGCGCCTGGGGCCGGTGGCCCCGGGGTGCACGGCAATGCGGGCGAAAAGTCGAAATCCTCCGGCGGTGGCAGCAAATCGCAGCAGCCGCAAACTTCCTCCTCCTCCACCTCGTCCGTATCGTCGCTGTCCGGGTCGGGCGGAAACGATCGTTCGAAGCAGTCGTCCTCCGGGTCGGGCAATGGAGGCGGCGGTGGTCCCGGCAGTGGCCATTCCAACTCGTCCAGCCAGAGCGGCTCGTCGGCCGGACCACCGGGAGGCCCCGGCCGGGGAGGCCCATCGCCCAGCGGGGCGGGCGGTCCGGGGATGGTCGGCATGCCGGGCGGTCCGCCCGGTGGCCATCCGCTCAGCGGGAGCCCGTTCCATCCGGCCGGTCCACCCCATCACCACTCGCCGTACGGTCCACCGCAGCCGCACAATCCGTTCATCGAGAACCAGCTGCCTCCGGTCGGTGGAGGCAAGCCGACCAGCCATATGGACGCGCTGCGAGCCCACGCCCATGCGGCGGCCGGTGGCGGGCTAGGTCCGCCGCCGGGCCATCACCCGCACCATCATCCGGGGCATGGGCCGCCACCGCCGCCCGGGCACCATCCGGCGCACCCGAGCGAACCGGTGCACATCGAAACGCTCGACATCGATCCGGATCCGGAACCGCCGTCCCCTGTCCATGACATGAACCGGGGCCCGAGCCCGGAAGCCAAACCGGACGATACCGAGTGCCACCGGTCGCAATCGGCAATCTTCGGTCCACCGCCACCGGGCCATCATCCGGGCCATCCGTCGCCTGGGCAGCAGTCGATGAAGCCGGACATTAAACCGTACCCGGACACGCCGGCCCTCAGGCAGCTGTCGGAGTACGCGCGGCCACACGTTGGTTTTAGTCCTGTGGAAACGATGGTTCCGCCACCATACCATCCACTGTACAATAGAGAAAGGGACATCTTTTTTAGGGAATTCGAGGACCTCAAGAACCAGCCCGGCATGGGCCCATCCCGGCTAGATCCGCACTGGATGGAGTACTATCGAATGAGAGGAATGCATCCGTCACAGTTCCCTGGGCTTTACGGCAATCCGGCGGCCATCGCACAACTGGAGCGGGAACGAATAGGCTTGCCACCGCATCCTGTTGCTGGGCTGGATCCATCCGATCCGATGTTGCGCTTGGCTGGCGAATACCATGCACACTCCCATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTTGTGCTGTTGCGTATGTCCTATGATCCACTGCAGGCCGCTGAATTTCAACGACAAAGTGCATTAGACCGGGCCCAATCGCTGCATGAGCAGTACATGAGACAACACGAGCGCGAGATGAAGGTGCGTGCACTGGAGGAAGCAGCACGGGGTGGTAAACATTAG
Protein Sequence
MATLPDYQPIENYRSEDDEDRDLEDPRWTPGLYIDNDLLMYLTAARSISAFQGMCEEDGCMAASRDDTTINAFDVLHDSGYDAGKALEALLKCPVTKGIEKKWTEEETKRFIKGLRQFGKNFFRIHKDLLPHRPTPELVEFYYLWKKTPGANQNRPHRRRRASSLRRMRTRQKPTKETNATNAKRPKRGGTETPEQQTATGTAAAAATAGAAATAGGGAPNTGGSSGNGASGSLDIGPTVDGVGGKHGGSQTGSKGSKSAGPGKTETTTPSKGKKRSNEQEVDGSDEKDGQKRKRSDSPAESLTTDSRPGSVLDEMESVSEAATETSIGTRTTGTPTPVGHERLQGANSVSSGTGSGAGAAADGSVPTAKDDEKDPLSLGPPLAAEPMVTESNENSSSSNTTTSTVAKSSSGGSEDKDDDSNAGATGAVVASAVATVPTAADTAKLPETEDISPPSTAATTPVATPAPPTAGALLPGADGSEPPQQGVAPSSEEAAAATNGTSVSTAGSGTTTTVVEGKPCVNALGPAPSSDQEMASKLANMKQEGSAATGPPTGAPAGSAAASVDFNSKDVFIKKEPNEESGAAAAAAASAASAGSSSAPGEQSSGSGVGGGAAPTSGAPSEPQDLKLKIEVKSEAKLMPGGGAGSNESSSQGGAAQGPPEMKYDPENLVMKPYESHIKYGGHPGEDGMKYGEHKYGPLPPHHQPGPGEPPGLKYGPPGPQDEPLEYDMKRYPAHGPPPPPNQDGGPLPLKLGGGPPGPPSASGAPGEPPSGAGPPPHMKLSQYAQDLTGLNLKYPPPDERSKFAPSPASDSGSGSGVAPPPPSGVGGPLPLIPKSHYPDPAQLSMLRQHYEHTFKYDPMAAVKYGPPGMPPFGAGPPGQHHHPHHPLAGGLPGQPQSQPQDLKYLPPEAMGPMKYPPSSVASDTPTSLKNNSFSADNLLKSSSSSSSGGPGANDASNPLDVSASGRHAITPNQDSQGSNSSSQATPLHGSSIASPQSGGPPPSLPPHGAGSYPPPHGPPPPGHPGHIVNPGLMPTLLGAGPNSSPVPPTSQPGGVHVPPVLGGHPLAHPGGVPPPQLLPTPPGSGPYQPSNMHRPGGPMPPSSVPSSVSLAVSSSGSTALTSTTASSSSSTAVTSHSPAPMRPSSDNGPLGLQPMAHHHRSDRDREPPRPGTNELPPTRASPINSLLQGVPPPHGMLPHPLPLHLGHPGMQLPPHHPAHLAGPLVGHAGLLPPSLAAHSAGLPLLGGPTPSALGSLMEVAGAGRRSPSSGPGSLAGGPHGHLPPTSMHQSVSALAAQSPSTPTGAGGGGPPSSSSSALSRASPNVPPGGPGTPGGGGYPGPGGHHHRSSSPANSNSSGLSRGSPMHLSHHPSTPGAGGAGGSGSSSAAAAAAAAASAERDRQIMRQQSPHMTPPPPSSSAPSAALISSPLSKMYGGPSGQRSPPPSHPFRPGASPPVIRHPQMPLPLPMTGPMAGIPGSVMHASQPYPLMHPSLFNPHHHNPFYAPYPYGPAYGPGFSYMKPGGSPLDNPMLHGHPTAIPPPRPEDAPGAGGPGVHGNAGEKSKSSGGGSKSQQPQTSSSSTSSVSSLSGSGGNDRSKQSSSGSGNGGGGGPGSGHSNSSSQSGSSAGPPGGPGRGGPSPSGAGGPGMVGMPGGPPGGHPLSGSPFHPAGPPHHHSPYGPPQPHNPFIENQLPPVGGGKPTSHMDALRAHAHAAAGGGLGPPPGHHPHHHPGHGPPPPPGHHPAHPSEPVHIETLDIDPDPEPPSPVHDMNRGPSPEAKPDDTECHRSQSAIFGPPPPGHHPGHPSPGQQSMKPDIKPYPDTPALRQLSEYARPHVGFSPVETMVPPPYHPLYNRERDIFFREFEDLKNQPGMGPSRLDPHWMEYYRMRGMHPSQFPGLYGNPAAIAQLERERIGLPPHPVAGLDPSDPMLRLAGEYHAHSHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLLRMSYDPLQAAEFQRQSALDRAQSLHEQYMRQHEREMKVRALEEAARGGKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00103618;
90% Identity
-
80% Identity
-