Acol002172.1
Basic Information
- Insect
- Anopheles coluzzii
- Gene Symbol
- bab2
- Assembly
- GCA_016097175.1
- Location
- CM027927.1:16649460-16724485[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.3e-12 9.4e-09 34.5 0.0 2 39 409 447 408 451 0.90 2 4 1.7e-12 3e-09 36.1 0.1 2 39 463 500 462 503 0.94 3 4 2.6e-18 4.6e-15 54.7 0.0 3 45 519 562 517 562 0.97 4 4 1.8e-17 3.1e-14 52.1 0.0 1 43 569 612 569 613 0.96
Sequence Information
- Coding Sequence
- ATGGATACCAAAGCAGCATCAGCGGGACCCGCCCCGACGCATTTACCTTCGTCCACATATCCAGCGACGTCACCGTACTCGAAGGGTGCCCGGTCGTCGCACCAGTATTTTAGTCTAAGATGGAACAACTACCAGTCAAACATGACGTCCGTGTTCCACGAGCTGCTCGAGTCACAATCCTTCGTCGATGTTACGCTAGCCTGCGAATACAACTCACTAAAGGCGCACAAGGTGGTTCTGTCGGCGTGTTCGGCGTACTTTCAAAAAATTCTCCTGGACAACCCGTGCAAGCATCCGACCATCATACTGCCGGCCGATATATGCTTTTCCGATCTGCAGTTCATCATCGAGTTCGTGTACCGCGGGGAAATCGATGTATCCGAGGCAGAGCTGCAGAGCTTGTTACGGACAGCGGAGCAGCTGAAAATTAAAGGCCTGTGCGAGGTAGGCGAACCACAGTACGAGCAGGACTACTCGCCCGCACTAAAGCGCTACAAACCGTACCGGTCACGGTCGCCCCCGGACAACCGGCATCAGCACCATCACCACCAGCAACCACCGCCCCCACCACCACCCTCCGGTGCGTCGGGATCGACCAGTGGTGGCCGATCCGGGATGGGCGTTGGAATAAATGGTGGTTCCGTTATGGGCGTACCGATGGGATATTTGGACTTTGCACCAGAGCCTCCAGCACCGACGGCGACGCCAGTGACAGAGCATGTGGACATTAATTGTGCGCCTAGCAGCCACGATACACGTGATCTGTCCAATTCTGTGCCAAACGATGGTGACTTACGAGTGAAATTCGAAACTCCGGCGTCAAGTGTGTCGTCGTCATCGTCCAGCCAGCATCCGGAGAACTTGGTTACTGGCAGCGGTGGGGCTGCCGGCTCGGTGACGCCTGGTCCGCCCACCAACAATAGCAACGGCAACGGAGCGGGCGGAGATGAGCTGAAGCCGAGACTGAACCTGAAGCAGGAAAACATCAGCGATGAGCAGCAGCATCAAACGATGGAGGTCGAGCAAGACCAGTCCTCGATGCACGGCATGGTGGTAACGCCGGAAATTTCGGGCATCATGAACCAGAGCCAAATGAGCGATATGTACCAGTCGGATGCTAGCGAGGACTCGAAGGTGGGCATTCTGGACGGTTCGTCGATGCAGTACACCAATCTGACCAGCCCCAACGAAGCGAAAACGCCTACCGGACCGAAAACATGGACCGCGGAAGATATGGAGTCGGCGCTCGAAGCGCTACGCTCTCACAACATGAGCTTGACTAAGGCCTCTGCTACGTACGGTATTCCATCGACGACACTGTGGCAGCGGGCGCACCGGCTCGGCATCGATACGCCGAAAAAGGAGGGTCCGTCCAAGACGTGGAACGAGGACTCGCTCAACAGCGCACTGGAAGCGCTACGGACGGGCACGATCTCCGCCAACAAGGCCTCGAAAGCGTTCGGCATACCGTCGTCGACGCTGTACAAGATTGCGCGCCGCGAAGGCATCCGCCTGGCGGCGCCGTTCAATGCCGCACCCACCACCTGGTCCGCGGAAGATTTGGACCGTGCCTTGGAAGCGATCCGTGCCGGGCAGACCTCCGTGCAGAAGGCCAGCACCGAGTTCGGCATTCCCACTGGCACACTGTACGGGCGCTGCAAGCGCGAGGGCATCGAGCTGTCCCGATCGAATCCCACGCCCTGGTCCGAAGACGCGATGATGGAAGCGTTGGAATCTGTCAAGCAAGGACACATGTCCATCAATCAAGCCGCCATCCACTATAACCTACCGTACAGCTCACTGTACGGTCGGTTCAAGCGCGGCAAGTACGATACGCCCAGCTCGGGAGGCGGCGGCGGTGGCAGTTCGTCCAATGCTGCTGCTGCTGCTGCTACCGGTGGAGGCGGCGCGGGCAGCGGTGGCGGTAGTGGCGCCGGCAGCGCCGCTAGTGCCGGAACAGGTGGCAATAATGTTGGCAGTAGTCCCCAGATGGAGTTTAAAATAGAACCACAGCATAACGATCATAGTCCAGAGAACACGGTAAATTACAGTTATTATTAA
- Protein Sequence
- MDTKAASAGPAPTHLPSSTYPATSPYSKGARSSHQYFSLRWNNYQSNMTSVFHELLESQSFVDVTLACEYNSLKAHKVVLSACSAYFQKILLDNPCKHPTIILPADICFSDLQFIIEFVYRGEIDVSEAELQSLLRTAEQLKIKGLCEVGEPQYEQDYSPALKRYKPYRSRSPPDNRHQHHHHQQPPPPPPPSGASGSTSGGRSGMGVGINGGSVMGVPMGYLDFAPEPPAPTATPVTEHVDINCAPSSHDTRDLSNSVPNDGDLRVKFETPASSVSSSSSSQHPENLVTGSGGAAGSVTPGPPTNNSNGNGAGGDELKPRLNLKQENISDEQQHQTMEVEQDQSSMHGMVVTPEISGIMNQSQMSDMYQSDASEDSKVGILDGSSMQYTNLTSPNEAKTPTGPKTWTAEDMESALEALRSHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWNEDSLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTPSSGGGGGGSSSNAAAAAATGGGGAGSGGGSGAGSAASAGTGGNNVGSSPQMEFKIEPQHNDHSPENTVNYSYY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00095732;
- 90% Identity
- iTF_00095732;
- 80% Identity
- iTF_00095732;