Basic Information

Gene Symbol
PPP2R5D
Assembly
GCA_000349165.1
Location
KB700960:1741-13067[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 27 1.7 1e+02 3.0 0.5 2 23 200 222 200 222 0.93
2 27 0.0031 0.19 11.6 0.2 1 20 233 252 233 254 0.93
3 27 0.043 2.6 8.0 1.1 1 23 261 284 261 284 0.93
4 27 3.4 2.1e+02 2.0 0.1 3 19 385 401 383 403 0.82
5 27 0.078 4.8 7.2 0.4 1 20 412 431 412 433 0.95
6 27 0.027 1.6 8.6 1.9 1 20 513 532 513 534 0.94
7 27 0.0013 0.078 12.8 0.5 2 23 542 564 541 564 0.96
8 27 2.8e-06 0.00017 21.1 0.5 1 23 571 593 571 593 0.97
9 27 0.71 43 4.1 0.1 1 23 599 624 599 624 0.94
10 27 5.2e-05 0.0032 17.2 2.5 1 23 630 652 630 652 0.98
11 27 1.3 79 3.3 1.8 1 23 658 683 658 683 0.91
12 27 0.21 13 5.8 0.4 1 20 689 708 689 710 0.91
13 27 2 1.3e+02 2.7 1.8 2 23 929 951 929 951 0.94
14 27 0.0011 0.065 13.0 0.3 2 20 961 979 960 981 0.94
15 27 0.1 6.2 6.8 0.7 1 20 988 1007 988 1009 0.95
16 27 5.7 3.5e+02 1.3 5.5 2 23 1126 1148 1125 1149 0.95
17 27 0.13 8 6.5 0.5 1 20 1186 1205 1186 1207 0.92
18 27 0.086 5.3 7.0 0.5 3 23 1289 1310 1288 1310 0.90
19 27 1.3 80 3.3 0.0 1 21 1323 1343 1323 1344 0.90
20 27 0.0058 0.35 10.7 2.4 1 22 1353 1374 1353 1378 0.93
21 27 0.066 4 7.4 0.7 2 23 1446 1470 1445 1470 0.84
22 27 0.0031 0.19 11.6 0.6 1 23 1514 1537 1514 1537 0.93
23 27 3.2e-06 0.00019 21.0 0.5 1 23 1544 1566 1544 1566 0.97
24 27 5.5e-06 0.00034 20.2 0.8 1 23 1572 1595 1572 1595 0.96
25 27 0.00019 0.012 15.4 0.6 1 23 1601 1623 1601 1623 0.98
26 27 0.015 0.91 9.4 2.4 1 23 1629 1652 1629 1652 0.93
27 27 3.8e-05 0.0023 17.6 0.4 1 23 1658 1680 1658 1680 0.99

Sequence Information

Coding Sequence
ATGACCCAGAATGAAGTTCTATCACAGTGTCGTGTTTGTGATAAATCGATTCGCGCCCAGAAACCATTACACATTTTCTCGCTGTTAGATAGAAGCGGGAAGGAGTCAGATACAAACGCCAAAACCATCGCCGAAACGATGGGAGAATTTGCGGATGTAACGATCAGCCCTGACGATGACCGTTCGAAATACATCTGTACCATTTGCCTGAAAGCGCTAATGAAAGCCTTCCAACTGCGAGAACAAATACGAGATGCCGAAAAAGATACGCCAACAATGTTGCAGTCGATTGAGATTGAAAATATCACCGAACAGGACTATAGTTTAGAGTATTTGGATGAATTTAAAGACGAAATTGATAGCAGCGTAATGCTGTTCCGAGAAACGCTGTCAGCCCTATCCGGTGAGCTGGACGGTGAAAATGAGTTACTCGAAAAACAGTTAACTGTTCGCCCGCTCTCCGAGGACGAAGATGTAGAGGACATCCTTCCCGAACATGGCGAACAAGGCAAATTTACGTTCGTTATGCCTTCACCCGACCTGATCGCCATTCGGATTGAGTTTGAGCATTTCGAGTATTTGGAAATTCGAGGCGAACGGTGTTGCGGCTGTCCCCATATTGCCGCGTCTCGTGACGCGCTGATGGCACATGCAAAGGAAACCCACTCACAAAACTACTATCCCGACGACAGTAGCTACACGTGCCCGATGTGTTATCAAAAGTTTGCCACAGCAAAAGCGCTCGAAACTCACAACCAGCGCTACCTGTATAGTGATGTGTTTCTGTGTACCGTTTGTCAGGAAGCGTTCAACTGCCAAAGCCAGCTCATGATACATCTACAGGAAAGTCACCAGCTAGAGCCGTCGAAGCAGGAAGGAGTAGAGATTGCGGCACCGCAAAATGAGGGCGATAGTTCGCAAGTAAAAGCTCCCACTGGTCTCAGGAATCACGGCACTAACTTGCCTCTTACACTACCCGATCCAAAGTTAATTAAAGAAACACGGGAATTTCCTCAGTATCGGCTGTATAGCCTCACTGGCGAACGTTGCTGTGCCTGTGGCATCTATCTAATATCGCTCGAGCTGCATGCCCACGAATGTCACGTAGATCTTGTGGAAATGCATGATACCGCATCGCACGAACTACTACGGTGCATCGTTTGCAAGCGTACCTTTTCCACCCGCCAGGAGCAAATCCTGCACGAGGAGGAGCGCAGAAATTTGAAGCAAATGTACCAATGCCGACGGTGCGAAATGCTTTTCGCTAGTAAGAACCAGCTTGTGAAGCATTTTCAAGCAACGAAAACCGAATGTAATGGAAAAAAGAAGGGGATTGATGCGATCTGCAACGGCGGAGATTCGGAAGCGACTGTAGACATTCCTGGGAAGGTTAATCATTTCTGCTGCTGCTTTACGCGCTGCAAAGAGGAGTACGCGAGCGAACAGGATCTACTCGATCATGCCCAGGCAATGCACGGGGGAAGAAGAAAGGAGAATGAAAGCAAATTGTCGGAACATGATAGTTTCGCACTATCATTCTGCTGTCCCATCTGCCGACGAATGTTTGATAGTGAGGATAAGGTGAAAAAGCATCGCAGCTATAAGCTCACCCTGCCAAAGCAAACGTGCCGCCAGTGTGGGCGAATTTTCATGAAAGCATCCGGACTTCGTGAGCACCAGCTACGGGAGCATTTGAATTTGAGGCTGGAGTTTGCGTGCGAGCTGTGCGGTAAGCAGTTCGTTAACCGGGCTACCCTGAACAAGCATCGCCGGGTGCACGAACCATCTCGGAACTATCCCTGCTCGGTCGAGGGTTGCGCAGCACTGTTCCGCGACGAGCAGCTGATGCAGCGACACTATCGAAATGTGCACACGGCTGTGAAGGCGTACGAGTGCGCTCACTGCCAGAAGCGCTTCCGGACGAAGGAGTCGCTTGATATACACGAGCGAAGCCATACGGGCGAGCGACCGTTTGCCTGCCGGTACGAGGGTTGTAAGAAGCGGTACGCTCACGGAACCGACCGGAAACGGCACGAACGCTCGGCACATACGGGGGAAAAGCCACACACGTGCACGGTATGTGGGACAGGATTTCTGCGCAAGCGAGAAATGCGACTGCACGTGGAAAAGCGTAGAAAAGTTTCCAGTTTGGCGGAAGAAAATATAGAATCCACACCAGTGTTGAGTGACCAGAGATGCTGCATCTGCTCCAAGCATCCGCAGGGAGATTTGCTTGAACTTTCCATGGTTGTAGAAACGGGCAGCTCCTTAACGATTGCCACCATCGTGGAACAAGTGGCCTCTATCAAGGTGAATAATGTTCAGAAAAGCATTTGCGGTGGTTGCTGGGCAAAGATCCAGGCGGCCTACTCGATACAGAGAGAAATCCGTGGGTCAGAATGTATATCACAGCGGGATGATGATTGCGACAGTGATGTGGAGGAGGAGAATGAAGAACACTTGGATAACGCCAATTGTGTAGCGAAGGAAGAACCCGAGTCGGAACAGGATGACATCGACGAAGGCGAATATTGTATTGAATATCTGGACGATTGTGCGTACGATAATGTGGATGAGCGTAATGAGGAATCACAAGGCGAAAAACAGCATCCACCAACAGAAGAAAGTATGGAGGTTGTTATTGAACCGTGTTCCGACAAGGAAGAGCACGAAGAGTTGAAAGTAGACGGCAAAGTAACGCGTCAGTTCCAGATGCCTAACGCGGCAACGATTGTGACAGATGTACTGCACGAGCAGTACCGGTCGCTAGAGGTAACCGGGGAGCGGTGCTGTGGATGCAGTTTTGTTGCCAAAACACGCAAAGAGTTGCTGCAACACTCGGAAACAGTTCACTGCATCGAGATGAACGACCACGGGGACTACTGTCCGATTTGTTTCTATAAATTCTCAACCGATCGGCATCTCGAGCGACACATTGAAGAGTTTAAACTGAACAAGATGTACGTTTGTTTGCGTTGCAATCGTTTCTACAATTTGAAAAGACAATTGTTTAACCACCTGCTCGGTTGTGATATGGCTGAGGATGCTGACGCACACGAAAGCCAGACAGAAAATGACGGACTTACGATCGAACCCGTCGAAGACGAAGCGGAGGAAGAAGATGGCGAGTATGAAGAGTATTACCTACAGGATGGTACGGACACGGATGAACAGGCGGAGCTGTTCGCTGACGATCGTTTACAAAACGCAACCGATCCACGTGTGTTGCATCGCTATAAAGAACATTTTGAAGAGATACTGTCGAACGAACGGCTATTCTACCAGTTAAGCGAAACCGAGCTGAACGTACAGGACGTACAAATCACGGTTCAACACAATTTCGAAACGTTCAAGTACATTCGGTTGCGTGGGTTGCGATGTTGCGGTTGTTCCTATACCTGCATGTCCAGTGCTCTGCTGGTAGAACACAGCAAGACAACGCATCACACAAAGGATCCGATCGTCGATGAGCGTTGTTGCGTGCTGTGTCGGGCAGAGTTTCAAAACATCCTAGACCTTGTGAAACATATATGCTTTTTCACCACCAGACAACTATTCCTGTGCACGGTGTGTGATGCTTCGTTTTTAAACAAAGAAAGCTTGCGGTACCATCAGATCCACGACGATAGGCACCGAGCGTTGGAGAATTACAAGTTTCAACAAGCCGGTATCGAACTCGACACATCGGAAGGGTTCGTCGAGCTGGACCAGCCGGCCGTTACCAGCGAACTGCGCAAACTGATGGCGGAGAAGATTACCCATCGGCCCAAGGCGATTGACTGTATTCCGATGCCCGAAGAACGGTTTATAGTGAGCAGGCAGGAGTACAACAACTACAGCGTCCTGACCGTGGTAGCAGAATATTGTTGCGGATGTGCAAAGTTTTTCGATACGCTTGCCGAACTACAGCAGCACGCCGAGCTCGAACACTATTTGCCACTGAATTTCTGTGCCCGTACTTATGGTCACCAGTGCGAAATCTGTTACGCCGTGTTTGAGCTAGAGCGGGGGCTTGCAATGCACCGGGCTACGAGACGTACAAAGAAGAAGACACTAtttttttGCAAACTTTGTGGGATGCTATTTTCGAAAAAGTTCTGTCTAGCGCGGCACATGCAGTCAGCACCCAACCATCTCTCGCGACTTATCGTTGATGCGACCATGAATGCAGGCCGCACTGAGGAAGGCGACGAACGAGAAGAGGATGATTCCGAACCGCCCTTTCCGGTTTCGCCTAAAACAGCTGAATCGGATCCACGTGTTAAGGAAGCGCTCCAGTTACACCGGTCGGTGGAAGAAAAGGGACTAGAAAAGGTCGGTCATCTTGTCTGGTATCATTGTTGCTTCCCGAAGTGTCCGGAGACATTTGCGAGCGAAGAGGAACTGCTGGAGCACGCCCAGGAGGAGCACAATGGTCAGCGACGGGAAAACGAAAACGAACGCAAGCTGGGCACGAACGTCTGTCCTGCCTGTTGCAAACCATTCCAAAGCTTAGCAAAATTAGTGTGGCATCGATTTAAACGGTTCGTGCCCCGCCAGTTCAACTGCAAACAGTGCGACAGCACGTTCGACCGGTGGGTAAAGTTGAAGATGCACGTGGAGCAAGAGCACAGCGCAACACCGCCAAGCTTCGACTGTCCCGAATGTGACAAATCGTTTGTAGTACGGTCGAGACTGACTGCTCACCGGAAGACGCACACCGACCGGAAAGATCACAAGTGTGATGTGTGCGGCACTGCATTCGTTAGCAAGGGACTGTTGAAGCGGCACCGCAGAGCGCTGCATTCAACGGAGCTGCTGTTTGAGTGTAAGCTTTGCTCGAAGAAGTTTGCCGTGGTGGAAAAGCTAAAAATTCATCAGCGCGTCCATACCGGAGAGCGACCCTACGAGTGTTCGTTCTGTTCGCGAACCTTCATACACTTTTCCGATCGCAAACGGCATGAGATGGCTGCCCATACGATGGAAAGACCGTACAAGTGTGAACTATGTCCGGCATCGTACATCCGCAACCGGGAACTAAATCTTCATATGCAGAAGCATCAGCTGGACGCGAGGGGAAAACAGGCCTGGAAGCGAAGAAAGGACAGaaaaaaaGCGTGCGGTAATCTTCTGGTGGGCGAAAAACGAGTGAAGAGCCAAGTGTGCGGTGTGTGCTTCAAGATGACACTGAACGATGAGAATGGGGCCAGCAGCAATAATGTTGTCACGGCAGCAAGTGGAACGGGACTGTCAACGGCGGGAACCGGATCAGATCGACCAGCAGCAGGTACACAGCAGGTTGGAATGGGTGGCGGTGCGGGAATCGTTGGAGGAGCGATAGGTGGGGCAACTGGGCAATCGACGGGCCCAAACGGGGCTATCGGGgcaaccatcatcaacagtagccagaacaacaataataatatcaacaacaacagtatcatcagcaccaacaactctggcaacggaggtacgactgcagcaaacggtagcaatgcgattggcaatacgattaataataacaacctaaattctaatatcaccccagcggctgcgacggcaacggcactaagcaacagcaacaacaacaacaacaatagtattagcaacggcaacggtcagaatggtaagcagcagcagcaacagacggggctaccgtcgggcagtctggagaagcgaccgagcagcagcagtgccagcggcggtgctaacagcggcCGTTACATCATCCCGAAGTTTTACGAGATCGAAACGCTACCCCCGCTGAAGGATGCCGATCCATCCGAGCGCGAGGAACTGTTTATCCAGAAGCTGCGACAGTGCTGCGTACTGTTCGACTTTTCCGAGCCGCTGAACGATCTGAAGTACAAGGAGATTAAGCGCTGCGCCCTGCAGGAAATAGTCGAGCATCTGAACAACCAGAGCAACGTCATTACGGAGGCGATCTACCCGGAAGCGTTCAATATGGTGGCGACCAACCTGTTCCGCACGCTACCACCATCCTCGAACCCGAACGGGGCCGAGTTTGATCCGGAGGAGGACGAACCGACGCTCGAAGTGTCCTGGCCCCATCTGCAGTTTGTGTATGAGCTGTTTCTTCGGTTTCTCGAGTCGCCTGACTTTCAGCCGAACGTGGCGAAGCGGTACATCGACCACAGCTTCATTCTGAACCTGCTCGAGCTGTTCGATTCGGAGGATCCGCGTGAGCGCGATTTTCTCAAAACGGTACTGCACCGGGTGTATGGGAAGTTTCTCGGCCTGCGTGCCTTTATCCGCAAGCAGATCAACAACATCTTCTACAAGTTTATCTACGAGACGGAGCACCACAACGGAATTGCCGAGCTGCTCGAGATACTGGGCAGTATTATTAACGGGTTCGCGCTACCCCTAAAGGAGGAGCACAAGCAGTTCCTGCTCAAGGTGTTGCTCCCACTGCACAAGGTCAAAAGCCTGTCCGTGTACCATCCGCAGCTGGCGTACTGTGTGGTACAGTTTCTCGAGAAGGACGCCAGCCTGACCCAGCCCGTCATTAAGTGTTTGCTGAAGTTTTGGCCGAAAACGCACAGCCCGAAGGAGGTAATGTTTCTGAACGAGCTCGAGGAGATACTGGACGTGATCGAGCCGGCCGAGTTCCAGAAGGTGATGGAGCCGCTGTTCCGCCAGATCGCCAAGTGCGTTTCCAGCCCGCACTTCCAGGTGGCCGAACGGGCGCTGTACTACTGGAACAATGACTACATCATGTCACTGATATCGGAAAACTCGAAGGTGATCATGCCGATCATGTTTCCCGCCCTGTACAGCAACAGCAAATCGCACTGGAACAAAACGATCCACGGGCTGATCTACAACGCGATCAAGCTGTTCATGGAGATGAACCAGCTGCTGTTCGACGAGTGTAACCGAAAGTACCAGGCAGAGCAAGAAACGGAACAGGAGAAGCTGGCACAGCGGGACGCGCTCTGGCAGCAGATGGAGGATCTGGCCGCGCTAAACAGTAAGTTGTCGCTGAACGACGACACGACGAGTAGTAACGGTGACCATCAGTCGGGTAACGGTCGATTCTCGAGCAGCTATAGCCACTCGCAGCAACACCGACAGATGAATGGTACGTCAGCGGCATCGTCAGCCGGCGGCGTGTACGATCGACGATCGATACAGCACAGTAGCACCTAA
Protein Sequence
MTQNEVLSQCRVCDKSIRAQKPLHIFSLLDRSGKESDTNAKTIAETMGEFADVTISPDDDRSKYICTICLKALMKAFQLREQIRDAEKDTPTMLQSIEIENITEQDYSLEYLDEFKDEIDSSVMLFRETLSALSGELDGENELLEKQLTVRPLSEDEDVEDILPEHGEQGKFTFVMPSPDLIAIRIEFEHFEYLEIRGERCCGCPHIAASRDALMAHAKETHSQNYYPDDSSYTCPMCYQKFATAKALETHNQRYLYSDVFLCTVCQEAFNCQSQLMIHLQESHQLEPSKQEGVEIAAPQNEGDSSQVKAPTGLRNHGTNLPLTLPDPKLIKETREFPQYRLYSLTGERCCACGIYLISLELHAHECHVDLVEMHDTASHELLRCIVCKRTFSTRQEQILHEEERRNLKQMYQCRRCEMLFASKNQLVKHFQATKTECNGKKKGIDAICNGGDSEATVDIPGKVNHFCCCFTRCKEEYASEQDLLDHAQAMHGGRRKENESKLSEHDSFALSFCCPICRRMFDSEDKVKKHRSYKLTLPKQTCRQCGRIFMKASGLREHQLREHLNLRLEFACELCGKQFVNRATLNKHRRVHEPSRNYPCSVEGCAALFRDEQLMQRHYRNVHTAVKAYECAHCQKRFRTKESLDIHERSHTGERPFACRYEGCKKRYAHGTDRKRHERSAHTGEKPHTCTVCGTGFLRKREMRLHVEKRRKVSSLAEENIESTPVLSDQRCCICSKHPQGDLLELSMVVETGSSLTIATIVEQVASIKVNNVQKSICGGCWAKIQAAYSIQREIRGSECISQRDDDCDSDVEEENEEHLDNANCVAKEEPESEQDDIDEGEYCIEYLDDCAYDNVDERNEESQGEKQHPPTEESMEVVIEPCSDKEEHEELKVDGKVTRQFQMPNAATIVTDVLHEQYRSLEVTGERCCGCSFVAKTRKELLQHSETVHCIEMNDHGDYCPICFYKFSTDRHLERHIEEFKLNKMYVCLRCNRFYNLKRQLFNHLLGCDMAEDADAHESQTENDGLTIEPVEDEAEEEDGEYEEYYLQDGTDTDEQAELFADDRLQNATDPRVLHRYKEHFEEILSNERLFYQLSETELNVQDVQITVQHNFETFKYIRLRGLRCCGCSYTCMSSALLVEHSKTTHHTKDPIVDERCCVLCRAEFQNILDLVKHICFFTTRQLFLCTVCDASFLNKESLRYHQIHDDRHRALENYKFQQAGIELDTSEGFVELDQPAVTSELRKLMAEKITHRPKAIDCIPMPEERFIVSRQEYNNYSVLTVVAEYCCGCAKFFDTLAELQQHAELEHYLPLNFCARTYGHQCEICYAVFELERGLAMHRATRRTKKKTLFFCKLCGMLFSKKFCLARHMQSAPNHLSRLIVDATMNAGRTEEGDEREEDDSEPPFPVSPKTAESDPRVKEALQLHRSVEEKGLEKVGHLVWYHCCFPKCPETFASEEELLEHAQEEHNGQRRENENERKLGTNVCPACCKPFQSLAKLVWHRFKRFVPRQFNCKQCDSTFDRWVKLKMHVEQEHSATPPSFDCPECDKSFVVRSRLTAHRKTHTDRKDHKCDVCGTAFVSKGLLKRHRRALHSTELLFECKLCSKKFAVVEKLKIHQRVHTGERPYECSFCSRTFIHFSDRKRHEMAAHTMERPYKCELCPASYIRNRELNLHMQKHQLDARGKQAWKRRKDRKKACGNLLVGEKRVKSQVCGVCFKMTLNDENGASSNNVVTAASGTGLSTAGTGSDRPAAGTQQVGMGGGAGIVGGAIGGATGQSTGPNGAIGATIINSSQNNNNNINNNSIISTNNSGNGGTTAANGSNAIGNTINNNNLNSNITPAAATATALSNSNNNNNNSISNGNGQNGKQQQQQTGLPSGSLEKRPSSSSASGGANSGRYIIPKFYEIETLPPLKDADPSEREELFIQKLRQCCVLFDFSEPLNDLKYKEIKRCALQEIVEHLNNQSNVITEAIYPEAFNMVATNLFRTLPPSSNPNGAEFDPEEDEPTLEVSWPHLQFVYELFLRFLESPDFQPNVAKRYIDHSFILNLLELFDSEDPRERDFLKTVLHRVYGKFLGLRAFIRKQINNIFYKFIYETEHHNGIAELLEILGSIINGFALPLKEEHKQFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDASLTQPVIKCLLKFWPKTHSPKEVMFLNELEEILDVIEPAEFQKVMEPLFRQIAKCVSSPHFQVAERALYYWNNDYIMSLISENSKVIMPIMFPALYSNSKSHWNKTIHGLIYNAIKLFMEMNQLLFDECNRKYQAEQETEQEKLAQRDALWQQMEDLAALNSKLSLNDDTTSSNGDHQSGNGRFSSSYSHSQQHRQMNGTSAASSAGGVYDRRSIQHSST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-